Gene detail

Detail information of Am05G009890.1 Annotation

Gene ID	Annotation
Am05G009890.1	AGAMOUS-like 15

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G009890.1	mRNA	Chr05	80789651	80792793	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM05G009890.1
GGAAGGTAATTTGGAAGGGCAACAAGCAATCATCACAAAAGAACAGCAGATAATAAAAGATAATTGAAATATTAAAAAAATAAATAAAATAATACAATAATAACTATGAAAAGATAAACATAATGCTTGTTTACCGGTATTCTGAAATGCTTAAAAAACTATGTTCTACAAGACTGCGATTCTGAATAATGTTTTAATTGGCAGGTTTTAATGTATTGTTTCGTCTCGCTAAAAACCGCACCAACCGCACCAATCCAAACCGCATTGGTTTGGTTTGGTTTGGTTTTTTTTTAAAGTCAACCGAATCAAACCAAACCGCATCTATTTAGGCCTTGCGGTTCGGTCCACTTTTTTGCCCAAAACCGAACCAAACCGCACCGCAAACACCCCTACTAAAGAGTACTATCATTTTTTTAAAATCTCAAAGTCAAATTAGTTATTTTTAACGTTAACTTACAGGGCATTTAATCCCATCAAAGGATAATTTGTCAATTCTTTTAAAATTTTAGGATTAAAATGATATTTTTTATTTGTAAGGAGCAAATATATTTCATATTTTTTTCTCAACTAGTTTGGGATTTTATGTTCTTTATTCATATTGTTTTTTTTCAAAAAAGTGAGTCTCTTACTCAAGAAGGCAAAGCTAAACAGAGCGACGGACTATTCGATGAGGCAGGGAGAAGAAAGGGTGAGGTGACTACAAAGGGTCCCACCATTTTCAACCTTAATACTAACAAGGAAAACAATAAATGTTAAGGAACCTCTCCCAACCTTATAGTCCCCAAAACAGCAAAGTATTGATAATGATGCCACTGCCCTTTCCCAAATTAGGGAACGCCTACTACTAGAAGTAGGTCATATATTCAGCAAACGAATAAAATCAGAATCAATCTAAAATAAAAGAATAAAATCAGAATCACAAAAAACAACATTAAAATAAAAAAGAAATACCAAACACTTTGACACAATTAGTAGATAACTCACTTACTAGAATCTATTTGGCGCGTCCCATTCGCAAACGGATAACAGATAAGACCAGAGTATTCGACTAGCGAATGATAAGTACAAGGTTTTGGTAAGCACTAGAGTTTAGCGTTTTTTGATAACATTTAGTGTTTTTTTTAAACGTTACTTCAAGTAGCATTTTAGCGGATAGCGTATAGCGTCTCACTTTTTTTTGACAGTTTTACCCTTATTATTTTTCTTAAATTACTTTTATTTTCTCATTAAATATTTTGTCATCATTAAATAATTCAATTATTAATTAAATATATTTTTATGTCATTTTATATTTATCAACTAGTTTTACCAAACACGTAATTTGCTATCAAGAAGCTTATCCGGTAGCTCTGATCATCCACTATTCGCTCATCTGGTAGCTTATTCTCTATTCGCCAGTTTTTACCAAACTAAGCCTTAATAGGTGTCATTACATTTTTTAGTCTTAAAAAAATACACTCCATCCTTTCCAAATTTTTTGTACTTTTGGTTCATTACACACAAACTAAGCTATAAGTTTACATTAGCTAAGTACTAAAATATCATCTTTATAGTTGTTTTAGAATAATTGAAGTGAAAATAAAAAATCTCGGGGACAATTGAGATATACTTTGGAATTCTAAAAAACTCAATAAATATAAATAATATATTTGAAAAAATTCAATGAATTGTACATTGAGTTTTTAAATGTATAATTATTTTGGGACAAAAATAAAAAGTCAAAAGTATCAAAGTTCCGTTACGAAGGAGTACATTTTCCAATGTGTATTAATTGCTAATTTTTTTTTATAACCGATTTAATGTGAAACGCATGTTTACTAAAAAGTCAAAGAGTGGATGTAAAAATTTAATACTAAAGGTATATTTGAGATAAGACTTCAATTTTATCACATTTAAAATCGTCATTGGTTTTTGTGATTTTCGTAATTTTTTCTTATATTAGAGATAAGAGGTACTCCTCTGGACCTCTTTATAAGCAAAGAATGCAATTTTAGATTAATTAAATGACTTATGTATTTGGTCTATAATAGATATCAAATACAACAGTTAATCAATGAATCTAAAATTGTATTTTTTGCTTATAAATAAATTCACAGGAATTGCAAGTAGTAACATACCCCCTAGGCCTATTTATAAGCAAAGAATGTAATTTTAGGTTTATTGATTAACCTACGTATCTTGCCTATATTATAGATCAGATACATCAGTTAATCAATAAATCTAAAGTTACATTTTTTTACTGATATATAAGTCCAGAGGAGAATGTAGGAAGAGATCAACACCTTAAATAAATGAGTACCCGAGATATTCCTATTTGACTCCCCAATCGGCCAATTACTTTAGCTCAAAAATAAAATAGAGTAAATACCCAAATCGATCCCCACAAAACCACAAACATCTATTTGGCCCTTGAAATAAAAATAAAAATAGTAATTGGGTGTTTCTAAACTATTGAAGATATAAAAATAGAAACACCCACTATTTGTACCAAAAATAAAAATAGAAACAAAGTAACAAACCAAAATAAAGAAATCCTACCAAAAAAAATCATTTTCCTAAAAAAACAAAATAAAGAAAAGAAAACTAGTGGGACCCACAAGAGAGGCCCAATGAGACAGAAAGCAAAGTCTAAATGTGGAAAAAAAATAAAAAATAAAAAAAAGTCATGCACAACTCTAAAAAAGATACAGAGCCATGCAAAGTTGCCGTTTCCAGGACTCGCCATTTGGGGTAAAAACGCTCCCTTCTCTCTCTTTTCTCGCCCTCTTTATCTTCTCAACTCAATTCCTCAGCAACAAAAAAACCCTCAATCCCCAAAAGGGTTAGTGTTGATTCTTAGGTTAGTTAGAAGGTAAAGGAACCACCTTTATACCTATATCTTAATTCTTAATATCTTAATTCAATCTCAACAGGGTTTTCATTTTCTCTGGTTTTGATCAATTGGGTTTCTGGGTTTTGTGAAACTAATTCCAGAAACCAATAAAAATTAAAACTTTAAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00319.21	SRF-TF	10	57	9.40E-26
PF01486.20	K-box	88	170	6.70E-18

Gene family

Gene family	Subfamily
Transcription Factors Family	Others
Epigenetic Regulators	FLCP13

Gene Ontology

GO term	Description	Category
GO:0045944	positive regulation of transcription by RNA polymerase II	Biological Process
GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Molecular Function
GO:0005634	nucleus	Cellular Component
GO:0046983	protein dimerization activity	Molecular Function
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function

InterPro

InterPro term	Description
IPR036879	Transcription factor, MADS-box superfamily
IPR002100	Transcription factor, MADS-box
IPR002487	Transcription factor, K-box
IPR033896	MADS MEF2-like

trEMBL

trEMBL term	Description
A0A1S2Z743	_

SwissProt

SwissProt term	Description
AGL15_ARATH	Agamous-like MADS-box protein AGL15

KEGG

KO	Description	Enzyme
K09264	MADS-box transcription factor, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G13790	AGAMOUS-like 15
Medicago sativa L.	MsG0480019879.01.T01	_
Oryza sativa L.	LOC_Os02g45770.1	OsMADS6 - MADS-box family gene with MIKCc type-box, expressed
Cucumis sativus L.	Csa020302	_
Glycyrrhiza uralensis Fisch.	Glyur001375s00028612.1	_
Codonopsis lanceolata	Cl_chr01_16530T	_
Arachis hypogaea L.	AH03G09760.1	Agamous-like MADS-box protein AGL15 like

Expression pattern