Gene detail

Detail information of Am05G009860.1 Annotation

Gene ID	Annotation
Am05G009860.1	ThiF family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G009860.1	mRNA	Chr05	80739298	80743928	+

Sequences

CDS:

>Am05G009860.1
ATGGCGGAATCCGCCAAGAATGAAGCTTTGCTGCAATTCGCGCCGATGCAGAGCTCGGTCGATGAAGGCTTCTGGCACAAATTGTCTTCTTTGAAGCTCAACAAACTTGGCATTGATGATTCTCCAATACCTATAATTGGTTTCTATGCACCTTGCTCACATTCTCAAGTATCAAATTATTTGACTCTTTTAGCCGAATCTTTACCTTCTGAATCAAGTGAGGCATCACTAATACCAGAACTGAGCTGCGGCAACAGGAACAGGTGTTCTGTTTCTGGGATACTTTACAACACTAATACTGTGGAGAGCTTCCATGCACTTGATAAACAAAAACTGTTAAAGGAAGAGGCAAAAAAGATATGGGATGACATTCAAACTGGAAAAGCTGTGGAGGAGTGTTCAATACTTTCAAGATTCCTTCTTATTTCTTTTGCAGACCTGAAAAAGTGGAGTTTCCAATACTGGTTTGCTTTCCCTGCTCTGATGCTTGATCCTCCTGCGACTGTGGTTAATTTAAGGCCAGCTTCTCAGTGGTTGAGCAAAGAAGAGGCAGAATCCCTCTCTGCTGCCTGTAACGATTGGCGTGGCTCGAAATCAACAACAGATATCCCATTCTTTTTAGTAACTATAGATCCAAATTCACATGCTACTGTTAGGCATCTGAAGGACTGGGAAGCCTGTCAGAGCGATGCTCACAAGATTCTCTTTGGGTTTTATGACCCATGCCATCTCCCAAATAATCCTGGATGGCCTCTGCGCAACTTCTTAGCACTAATTTCTGGGAGATGGAAACTCAACTCTCTTCAATTTTTCTGCTACAGAGAGAGCCGTGGTTTTGCAGATATGGGCTTGTCTCTTGTTGGTGAAGCATCAATAACAGTTCCACAAGGGTGGAAAAATGGTGTGCCTAATGCAGTTGGATGGGAACTTAATAAGGGGAGAAAAATACCTAGGTGTATTAGCCTTGCACAGTCCATGGATCCAACCAGGTTGGCCATATCTGCTGCAGATTTGAATTTAAAGCTTATGAGGTGGCGTGCTTTGCCTTCGCTAGACTTGAATGCCTTATCTTCCCTCAAGTGTCTTCTCCTCGGAGCAGGCACACTTGGATGCCAGGTTGCACGCATGCTTATGGCATGGGGTGTCCGAAAAATTACTCTAGTTGACAGTGGCAGGGTGGCGATGTCTAATCCATTAAGGCAATCTCTTTATACCTTGGATAACTGTCTTAATGGTGGTGAGTTTAAAGCTACAGCAGCAGTTGAAAGTCTCAAACGGATTTTTCCAGCAGTGGAAGCAGAAGGCATTGTTATGGCTATACCAATGCCTGGACATCCAGTGCATAGCCAGGAACAGGATAGCGTGCTTGACGATTGTAGACGTTTGCGCGATTTGATTGATACTCACGATTCAGTTTTTTTATTGACTGATACAAGAGAAAGTCGATGGCTCCCAACACTTCTCTGTGCCAATACTAACAAGATTACCATTACCGCAGCATTAGGGTTCGATAGTTTCTTGGTTATGCGTCATGGAGCTGGTCCTTTCAGTCATGCCCATGACTTGAGTGCTGAAACAGCTACTTCATCATCTGCCGAGAAGTGTGTAAATGACGCAAATGGAAAAAATAGATTGGGATGCTATTTCTGCAGTGATGTTGTTGCACCAACTGATTCAACATCGAACCGCACTTTGGATCAGCAGTGTACTGTGACACGACCAGGACTAGCTCCTATTGCTTCAGCACTTGCAGTTGAACTTTTAGTAGGGATTTTACATCACCCTCAAGGGATATTTGCAGAGGGTGATACTAGCAGTAGTGTCATTGGAGCCACTGAGCTCCCTCTTGGTATTTTACCTCATCAAATTCGCGGTTCCCTTTCTCAATTCTCTCAAATGAACCTTATAGGTTACTCCTCCTCCAGCTGCACAGCCTGTTGCAATACAGTTGTATCAGAATATCGAAACCGAGAAATGGAGTTCATACTTGAAGCGATTAATCATCCTACTTACCTAGAGGACGTCACTGGACTGACAGAGTTGATGAAATCAGCCACCTCATTCTCATTGGATTGGGACCAGGATGATGATGAGGAGGATTGTCTTGAAATATAA

Protein:

Promoter(3k):

>AM05G009860.1
CTGTATCATCTGTACTCTTTATTGCATAATCTGTTTTTAGCAGGTTGCTGTTGTATGCATAAATGGTTGGAAACATACATGTATCATCTGTTTTAAGCAGCTTGCTACTGTATGCATAAATGGTTACAGATTGCATAATCTGCTGTATGCATAAATGCGAATACTTGTTGGCTTTCATTACATAATCAGTAGCTACTGCCTATATGCAGCTTATGTGTTAGAACACTTGTTGGCATATGTGCTACTGCCTATTATGCAGCTGATTGTGAAATGCTATTGAACTGAAATGCTGCTGAAATGGAAATCTGTATTATGCTGTATGCAATCTGTGCAAATTATCAACAATTACTTTGCCAAAATCCATTCATTACATAATCAGTAGCTGGAAACATACATCATTACATAATTTACATCATTAATCAGTAGCTGGAAACATACATCATTACATAAACATAACTTAACTATTAACCCCTAAACCATTACAAACATACCCTGAACTAATAACCCCTAAACCACAACCCTAAGATTGAAAACTAATGCAACAAGGATGAAAATAATGATCCAGGAAATTGCCAAAAAACCCCATAACATGTTGTTCTTTTTCTTCATTTCTTGTTGAGCCTTTTTTGCTTCCTTGAACTCAGTAACCTTTGTCTTCAATTGAGCAACATTGCTATTCAAGTCAACAACTTTTTTCTTCAAGCCATCAGCCTTCTTCATGAAGGACCAAATTAGCTCCTTAGCTCTAGGACACATATCTTCATCATACCAGTTAAAGAATTGACATTGTTTTCGACCAAAATCCCGAAAAATAAGCAGTCGACCGATTAAAATAGAGATCAAAGAGAAATAACAGTGTAATGGCAGAAATCATACCTCATATAATGCACATCCATAAAACCTACGCCCAGGGTTCTGTTTTATCCAACCAGTCACCAATGGAGCTTCCTTTCCACAGAAGCATTGAATGGGTCTTCTTCTCAATGACCCTTGTGACGAAATAGAATACTCAGACATAGAGGTTCAGATCGTGAAGGGAGACGAAGAGATTTTGGGCGATTTGAAGCTCTGAATCGCGAAAATGGTTGAAGAAAGAAGGAAGGAAGAATGTACGATTCAGGGGGAGACGAAGGTTCGATTCAGGGAGACGAAGGTTCGTGTGGGTTTATGGTTCGCGCCATTGAAGCTCTCAGCTCTCAGGGAATAAGATGAAAGGAGCTCAGGGAGGAAGAAGATGGAAGAGGTCGGAGCTCAGGGAGGAAGAAGAAGATGGAAGAAGGTATGGCACTGAACCCTTCGTTCCTTCTTTTGTTCAATTTTTTTTTTAAAAAATATTAAAATGCCACATAGGATGCCTACGTGGCAGTCCATGTAGGATAAGTGAGTCAAACCACAGTCTTAATTTTGACCAAATTCTTGGGGGACTATGATTTTACAAATTGGGAAAATAGGGGGACTAAATTCGTGGGAAAAAAACTTGAGGGACCAAAATCGTGAATTGGTGAAAATAGGGGGACTAAAACTGTAATTAAGCCTAATAATTATTACATTTTTACTACAATGTCAATGCTAAACCCAATCCCTGCCTCCCCTAAAAACAGATTAAACCTAATCCCTCTTTCATCATCTACTTCATTATGAATTTGATATCTTTCCCTAATTCTCTCCCTCACATAGTGACACTGTTCGACTTTTCTTTGCCACTCAAACCACTTTTCTACAAAGTCAAATCTCAAAAGATGTGTGTGAAGAAGTTTGTGCCCAACTTCCCTTAAGAGGATGGTTTGAGCGTTGAAGTTGTTTAGAAGTCTAATTTGGATTAACTTCTCAAATTAGACACGTTGGTTCGATTTTGTTGCATCTTTAGAAACAATTGTTGGCACTGAACTTCCTCTATTTCAAATTTTGATAGTTACTCCAAGAGTAGCTATTGTCTGAATTACACCACTTAATAACTCTATGGACACCGAAATTCATTAATCCAACAATTGAATTAAAAGATCTTATTTAGTGGATCAACTTCAAAAAAATTCAAAAACTAAACAAAGATCTAATGTTGACCAAAAAAAAAAAACAAAGATCTAATACTTCATCAAAATAACTTCGTTTCAACGCATAATATACTTTTACAAATACAAACAAAATGTTGACCATATGATTGCATAACTACGAATATTGACCAACCCAAAAAGCCTGCAAACCGCATAAGGCGCGACTTTGGCTTTGAATTGTGAGCCAAAAATTTACCAGTGCTTTTTGGCTTGGTCCGATAAAGCTCAAACCCGAAATGGGTTGGTACGATGCAAGTTGAATAGTCCATATTGCAAGCTTTACCAATATCTCATACACACTTCTAGGTAGAGCTGTCAAACTGGGACGCTCGGCTCTGCCCAATGGGCCAGAGTGCAAAAGTGGGTTGGGCTGGGCCAGACTAGTTATCTATCGGGCTGCGTTTTTTGGAACCCAACCTAGCCCAAAACACTAGGCTTGCTGGGTCGGCCTGGCCCACTTCACATTTTAACAAAGGAAAACACAAAAAATGTTCAAAAAATACAGGGCCAGTTTGAGCTATGGACCAACAGGGCTGAGTCAAAATGGCCCGGATCTTTGTAGGCCCCTATTTTTTGAGCCCAACCCAAAACACTGAGCCATCGAGCCGGCCCGTTGGGATGGGCCAAAATTTATTTGGAATTTGATTTTCTAATATATATTCGGATAGTTAACTTCCCTAAGAAAAAAAATTAAAACGGGTAGGTGTATGAAAAAACAAAGCGTGTCTGCGAAAAGTAGCTCCCTCAATTTATAGCCCGCGAGAAACCAAACTTATTTGGCCCATTAAATCGGTGTTGACCAACAAATTTGCGATCTTTGACGATGACGATCACAAGCGTTCTTGACTGAACAAGACGATTGAAGATTGTTTTTGCAGAAAATCCAAATTCTTTTGGAACTTATTGAAGTGGAAATTGCGGATCTACAATTTGAAGTTAACAACCAACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF16420.8	ATG7_N	11	326	1.40E-98
PF00899.24	ThiF	340	596	1.70E-39

Gene family

Gene family	Subfamily
Ubiquitin Family	ThiF

Gene Ontology

GO term	Description	Category
GO:0032446	protein modification by small protein conjugation	Biological Process
GO:0070925	organelle assembly	Biological Process
GO:0010150	leaf senescence	Biological Process
GO:0050832	defense response to fungus	Biological Process
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR042523	Ubiquitin-like modifier-activating enzyme Atg7, N-terminal, subdomain 2
IPR042522	Ubiquitin-like modifier-activating enzyme Atg7, N-terminal, subdomain 1
IPR032197	Ubiquitin-like modifier-activating enzyme Atg7, N-terminal
IPR006285	Ubiquitin-like modifier-activating enzyme Atg7
IPR035985	Ubiquitin-activating enzyme
IPR000594	THIF-type NAD/FAD binding fold
IPR045886	ThiF/MoeB/HesA family

trEMBL

trEMBL term	Description
A0A1S2Z742	_

SwissProt

SwissProt term	Description
ATG7_ARATH	Ubiquitin-like modifier-activating enzyme atg7

KEGG

KO	Description	Enzyme
K08337	ubiquitin-like modifier-activating enzyme ATG7

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G45900	ThiF family protein
Medicago sativa L.	MsG0480019883.01.T01	_
Oryza sativa L.	LOC_Os01g42850.2	ThiF family domain containing protein, putative, expressed
Cucumis sativus L.	_	_
Glycyrrhiza uralensis Fisch.	Glyur000761s00025810.1	_
Codonopsis lanceolata	Cl_chr03_57240T	_
Arachis hypogaea L.	AH13G12430.1	Ubiquitin-like modifier-activating enzyme atg7 like

Expression pattern