Gene detail

Detail information of Am05G009060.1 Annotation

Gene ID	Annotation
Am05G009060.1	Glycosyl hydrolases family 32 protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G009060.1	mRNA	Chr05	75980615	75991131	-

Sequences

CDS:

>Am05G009060.1
ATGGAAGCCAATATTGACAATGCTCCATACATTCCCTTGCAAAATTCTGCTTCCCCAGATGCTAGGAGACCCCTAAAACTAAAGGGTACCCTTGTGATCATTGGCTCCATTGTTATTCTAATATCATTGGTTGCACTATTCAACATAAATCAGAACCATCACTTAGAGAAGATGCAGAACAATATGAAGCCTTCTACAATAGAATCTATCTCACAGCCTAGAGGGATTGCTGAGGGGGTTTCAGCAAAGTCAAATTTATTTCTTTCAGCTATTACATATAATTGGACAAATGCTATGTTATCTTGGCAAAGAACAGCTTTTCATTTTCAACCTCAACAAAATTGGATGAACGATCCTAACGGTACGTTTTCTCTCATTCGCTATTTGTATGCTTTAAATATTTCTAGGAAAGTTCTTGGTTACTTTAGGAAAAATATAGGTCCATTTTTTTATAAAGGTTGGTACCATCTATTTTACCAATACAATCCAGATTCAGCTGTGTGGGGGAACATAACATGGGGTCATGCTGTATCACGAGACTTGATTCACTGGCTATACCTTCCCATTGCCTTGTTTCCAGATAAACATTTTGATATCAACGGTGTATGGTCAGGATCCGCCACCCTTTTGCCAGATGGCAAAATCATAATGCTCTACACGGGTGATACCAATCAACACAAACAAGTCCAAAATCTTGCATATCCCGCCAACCTATCAGATCCTCTCCTCCTTGATTGGGTTAAATATGCAGACAATCCTGTTTTGGTGCCTCCACATGGCATAGGCTCAAAAGATTTTCGTGATCCCACCACAGCGTGGATTGGGCCAGATAAGAAATGGAGGGTCACGATTGGTTCAAAAGTCAAAAAGACTGGTATTTCATTGGTTTATACGACAAAAGATTTCATCCACTTTGAGCTCAATGATCAATTTTTACATGCGGTTCCGGGTACGGGTATGTGGGAGTGTGTGGACTTTTACCCAATTTCGATAAACGGGTCTAATGGTTTGGATACTTCAGTTATTGGGCCAGGAGTGAAACATGTGTTGAAAGCTAGTTTGGATGATACAAAAGAGGACCATTATGCAATTGGGAGATACTTTGTTGAAAATGATACATGGGTGCCCGATAACCCGATTGCTGATGTGGGTATTGGGTTGAAGTTGGAATATGGAAAATACTATGCTTCAAAGACATTTTATGATCAACATAAACAGAGAAGGGTACTTTGGGGATGGATTAATGAATCAGATAGCGAACATGCTGATTTGAAAAAGGGTTGGGCATCTCTTCAGACCATTCCAAGAACAGTGGTGTTTGACAAGAAGACTGGAACCAATTTGGTTCAGTGGCCAGTTGAAGAAGTAGAGAGTTTAAGATTAAGCAGTGCTGAATTTGAAGAGGTTTTAGTCAAACCTGGCTCAATTGTGCCACTGGATGTAGGCCCCGCAACACAGTTGGACATATTTGCTGAATTTGAAATAGAATTGTTAGAATCCAAAGGGATTATCAAGGAAAATATTGGGTGTGGAAAAGGAGCTTTGGAGAGAAGTGCTTTGGGACCATTTGGCATTGTAGCTATTGCAAATGACGAACTTTCTGAATTAACACCAATTTATTTCAGTCTTTCTACTACTAGCTATTACAATTCAACCACTTCTTTCTGTGTTGATGAAACAAGGTCTTCAAAGGCTCCTGATGTTTCAAAGAATGTTTATGGAAGCAAAGTTCAAGTTTTCAGTGATGAAAGACTATCAATGAGAGTATTGGTTGACCATTCAATCATTGAAAGCTTTGCACAAGGAGGGAGAACTGTGATCTCATCTAGAGTTTACCCAACAGAAGCAATATATGGAGCTGCAAAATTATTTCTATTCAACAATGCAACTAACATAAACATCAAGGCCTCCCTCAAGATTTGGCAACTCAACTCAGCTTTTATACGCCCCTTTCCCTTTGACCAAAGTCAATGA

Protein:

Promoter(3k):

>AM05G009060.1
CAATATGGAACCTACCTCTGTGAAGCAAGCCTTATGTGAACCCCACTGGTTAAAGGCAATGCAACAAGAGTATGATTCTCTCATGGCAAATAATACATTGACTCTCACTCCTCTTCCTCCAAATAGAAAGTCAATTGGATGCAAATGGGTGTATAGGATTAAAGAAAATCCCGATGGGTCTATTAATAAGTACAAGGCACGTTTGGTGGCTAAAGGGTATAATTAGCAACCTGGACAAGATTATGGTGTACATTCTCTCCTGTTGTCAAACCTACAACTATTAGGGTTATTCTCACACTGACCTTGACTTATAAATGGGATATCCAACAAATAGATATCAATAATGCGTTTATCAATGGTCAGTTGAAGGAAGATATCTATATGCAGCAACCTCCAGGCTTTGTCAGTGTTGACAGAACTCTAGTGTGCAAACTAAACAGATCATTATATGGCTTAAAACAGGCTCCAAGAGCCTGGTATGAGACTCTGCACAAAGCTCTTCTACAGTTTGGTTTCAAACACAGTCAGTGTGATCACTCTCTCTTTGTGTACAATTCCAAGGGTGTTCACCTATATGCTTTGGTCTATGTGGACGACATTCTTATTACTGGTTCATCTTCTCAGTTAATTCAAGATCTTATCACCAGGTTGCACAATCAGTTTGCATTGAAACACATGGGAAAACCAGAATACTTCTTAGGCATTGGAGTAAAATATCTCTCTGATGGTTCTTTACTGCTCTCACAGACCAAGTACATTCAAGACCTGCTTGCTCGTGCTAATATGTTGAATTGCAGCTCAATGTCCACCCCAATGGTGGCAAGTTGCAAGTTGAGTCGCTTTGGAGCTGACAAGTTGTCTGATCCTACACACTACAGGTCAATTGTAGGAGCCCTACAATACATCACACTTACAAGGCCTGAACTCTCTTTTAGTGTGAATAAAGTCTGTCAATATCTCTCTCAGCCACTTGACACTCATTGGAGGGCAGTCAAGAGGATCTTAAGGTATCTCAGTGGCACTTCTGACTTTGGCCTCCTGCTGCAACCAGCTCCACCAGATACTGCTTTCTCTCTCAGAGTCTACTGTTACTCAGATTGGGCCGGTGATCAAGATGATAGGCGCTCCACATCTGGTTCTTGTCTGTTCTTTGGCCCTAATTTGATTTCTTGGAGTTCAAATAAACAATCTCTTGTGGCCAGATCAAGTGCAGAGGCCGAATATAGAAGCATGGCCAATGCTACTGCAGATCTTCTTTGGGCTCAATCCCTGCTATCAGAATTACAGATATCTACTCAATCCCCTCTTCTATTATGTGATAACCTGAGTGCTGTGCATCTTTCTCATAATCCAATTCTTCATGTAAGGCCAAAGCACCTTGAACTTGATATACATTTTGTAAGAGGGAAGGTGGCTGCCAAGAAGTTATCTGTTCAGCATGTTCCTGGCAGCTCTCAACTAGCATATGCATTAACTAAACCTTTACCAACTGCAACATTCACTGATCTTAGATACAAACTCAAAGTGTCAAATACAAAAGACATCCAATTGAGTTTGTAGGGGGAGTAATAGATGTATAGGAATAGAATATCAAGCTGAGAAGTTGCAATCCTCTGTATCTCTATAACTGCAGTAAACTTTGTTAAACTGCAGGGAAGTCAGTTAGATTTAGTTTCACTATACTGCAATGTATAAATACCAATTGTACTCATTCCTTCATTCAATGGAATATACAGCACATTCATTCTCTCACTGATTCCCAATATAAATCCTTTTTTCCGCATTCAATTTAAACTAGCATACTCAAAAACAAATATAAAGAAAAAGATTTCATTTTTAGCATATAACCTTATTCACCCACCTCTAAGGTTATCATATAGTCCAACAGATAGTAGCTATGCACACGAGTATCCACAATCTTCTACACCTGCTATTATTGGGCGGAGACGGGTAGCATAGTATGCCCTCGAGTACCCACAATTTTAAATTATCTATTTCATTATGTTGAACTATTGATTAGTGCTTCTTTTTGAAATGAATTATTGATTAGAACTTTTAAATTAAATGAATTATTGAACCGATTTCTTTGATTTTTTTTAAACTATTTTCCAACTTTTTAAATTTTAATAGATATCCATATATACATGTGGATATTCGTAAGTTTTGTGATGGATACATGAACATATATGAGGCAAATTTTCATCTAAAGATGCAAGTTTGCAAACAACAAAAATCTAATTACGCAAGCAGCAAGAAACTATTACCCTTATTCGTTCCACTCTATTGTCATCCCTAATTCTGCTTGAAAAATAAACAACACAACCCGAAATGTTTACATTCATTCTAACTCTTTTTCCTTATCTATTTGTATTCCACAAGCCAATTTTATAAATAAGACAAGAATATTCATACCCCTTCTAATCTAAAACATTGGTTTTTTTAATGATATTTATATCAACAATATTTAATTGACCCACATAATTATAGTTATATTTTAATTTTCAAAAGTCTTCCAAGAAAAAATCAAAACTACTCCTCCCTAATTCCTAAATTGCGTGCAGCCCTATCTAATTAACATAATAGTCAAAATCACAATTGTAAAATATCAAATTATTAACATTTTTATTTCTCCAAATAATATAGTCTCCCTTTGAATTTCATTCCAAATCCTACTTGTCAAATCTTGTTGCACACAAAATATACATATATTAAAGAATCCAACGTGTCTATGCCCTATTGTTCTTATCATCCATTTCCACCTGCAAACATATCATTTCTCTTTCTTTCCTTTTCTGTCTCTACCTGCCTCTTCAAATCCAATTAAGTTGGAACCACAAATCCAACTTCCTCATATCTCAATATTAATTGTTGTCACCCATAATTTCAACAGTTTCCTTAATTTCTTCTAGCTAGTTCTCTCAACTTCTGATTATTTATTATACACTGCCGTCTTAAAATCTCCAGGACACCCCCATAATTCACATCTTCACCCCCAATAAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00251.23	Glyco_hydro_32N	147	452	6.70E-100
PF08244.15	Glyco_hydro_32C	455	642	2.10E-27
PF11837.11	INV_N	16	100	1.10E-10

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GH32

Gene Ontology

GO term	Description	Category
GO:0045944	positive regulation of transcription by RNA polymerase II	Biological Process
GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Molecular Function
GO:0046983	protein dimerization activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0005634	nucleus	Cellular Component

InterPro

InterPro term	Description
IPR023296	Glycosyl hydrolase, five-bladed beta-propellor domain superfamily
IPR013148	Glycosyl hydrolase family 32, N-terminal
IPR013189	Glycosyl hydrolase family 32, C-terminal
IPR018053	Glycoside hydrolase, family 32, active site
IPR001362	Glycoside hydrolase, family 32
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
IPR021792	Beta-fructofuranosidase, N-terminal domain

trEMBL

trEMBL term	Description
A0A8B8LEL6	_

SwissProt

SwissProt term	Description
INVB_DAUCA	Beta-fructofuranosidase, soluble isoenzyme I

KEGG

KO	Description	Enzyme
K01193	beta-fructofuranosidase	[EC: 3.2.1.26]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G12240	Glycosyl hydrolases family 32 protein
Medicago sativa L.	MsG0380011675.01.T01	_
Oryza sativa L.	LOC_Os02g01590.1	glycosyl hydrolases, putative, expressed
Cucumis sativus L.	Csa012415	_
Glycyrrhiza uralensis Fisch.	Glyur000645s00028165.1	_
Codonopsis lanceolata	Cl_chr03_43790T	_
Arachis hypogaea L.	AH13G13340.1	Beta-fructofuranosidase, soluble isoenzyme I like

Expression pattern