| Gene ID | Annotation |
|---|---|
| Am05G009010.1 | Pectin lyase-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G009010.1 | mRNA | Chr05 | 75667252 | 75670446 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00295.20 | Glyco_hydro_28 | 65 | 410 | 9.80E-83 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH28 |
| GO term | Description | Category |
|---|---|---|
| GO:0016020 | membrane | Cellular Component |
| GO:0010047 | fruit dehiscence | Biological Process |
| GO:0009901 | anther dehiscence | Biological Process |
| GO:0016829 | lyase activity | Molecular Function |
| GO:0009057 | macromolecule catabolic process | Biological Process |
| InterPro term | Description |
|---|---|
| IPR011050 | Pectin lyase fold/virulence factor |
| IPR012334 | Pectin lyase fold |
| IPR006626 | Parallel beta-helix repeat |
| IPR000743 | Glycoside hydrolase, family 28 |
| trEMBL term | Description |
|---|---|
| A0A396I4V0 | _ |
| SwissProt term | Description |
|---|---|
| PGLR3_ARATH | Probable polygalacturonase At3g15720 |
| KO | Description | Enzyme |
|---|---|---|
| K01184 | polygalacturonase | [EC: 3.2.1.15] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G15720 | Pectin lyase-like superfamily protein |
| Medicago sativa L. | MsG0580026015.01.T01 | _ |
| Oryza sativa L. | LOC_Os07g10740.1 | polygalacturonase, putative, expressed |
| Cucumis sativus L. | Csa003051 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000180s00014065.1 | _ |
| Codonopsis lanceolata | Cl_chr01_10710T | _ |
| Arachis hypogaea L. | AH18G00770.1 | Probable polygalacturonase At3g15720 like |