| Gene ID | Annotation |
|---|---|
| Am05G007960.1 | damaged DNA binding protein 1A |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G007960.1 | mRNA | Chr05 | 67786723 | 67804540 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF10433.12 | MMS1_N | 90 | 492 | 2.10E-80 |
| PF03178.18 | CPSF_A | 667 | 775 | 5.10E-25 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DDB1 |
| Ubiquitin Family | DDB1 |
| GO term | Description | Category |
|---|---|---|
| -- | -- | -- |
| InterPro term | Description |
|---|---|
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR011047 | Quinoprotein alcohol dehydrogenase-like superfamily |
| IPR018846 | Cleavage/polyadenylation specificity factor, A subunit, N-terminal |
| IPR004871 | Cleavage/polyadenylation specificity factor, A subunit, C-terminal |
| trEMBL term | Description |
|---|---|
| A0A6A4Q8V9 | _ |
| SwissProt term | Description |
|---|---|
| DDB1_ORYSJ | DNA damage-binding protein 1 |
| KO | Description | Enzyme |
|---|---|---|
| K10610 | DNA damage-binding protein 1 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G05420 | damaged DNA binding protein 1A |
| Medicago sativa L. | MsG0480023202.01.T03 | _ |
| Oryza sativa L. | LOC_Os05g51480.1 | cleavage and polyadenylation specificity factor, putative, expressed |
| Cucumis sativus L. | Csa001615 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000070s00008075.1 | _ |
| Codonopsis lanceolata | Cl_chr07_22740T | _ |
| Arachis hypogaea L. | AH13G28780.1 | DNA damage-binding protein 1 like |