Gene detail

Detail information of Am05G005310.1 Annotation

Gene ID	Annotation
Am05G005310.1	Major facilitator superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G005310.1	mRNA	Chr05	37922442	37930947	-

Sequences

CDS:

>Am05G005310.1
ATGGAGAAGAACAGAGTACTTGATGCAAAAACAAAGGAGCTTGATGATGAAATGAAATGGGTTCATGATTCTTCATTGGATTATAAAGGCAGAGTTCCTTTCAGAGCTTCAACTGGTTCTTGGAAAGCTTCTTTCTTCATTATTGCAATTGAGTTTAGTGAGAGACTAAGTTACTTTGGAATAGCAACTAGCTTGATAATTTACCTGACAAAGGTTATGCATCAAGATCTTAAGACAGCAGTTAAGAATGTGAATGATTGGTCTGGTGTCACCACTTTGATGCCACTCTTTGGAGGATTCCTAGCTGATGCTTACTTGGGTCGTTACACCACTGTCATTGCTTCATGCATTATTTATCTCATGGGTTTGGTCCTACTTACATTGTCATGGTTCTTACCAAGTTTAAAACCATGCTCACATACTAATACATGCACAGAACCAAGGAAAATTCATGAAGTGTTCTTTTTCCTAGCAATCTATTTAATATCCATTGGAACAGGAGGACACAAACCTTCATTAGAGAGCTTTGGAGCTGATCAATTTGATGATGAACATGTTGAAGAAAGAAGACAAAAAATGTCTTTCTTCAATTGGTGGAATTGTGGTCTTTGTAGTGGACTCGTATTAGGAGTTACAGTAATTGTTTATGTACAAGATCATGTTAATTGGGGAATTGCTGATATTATCCTCACTGTTGTTATGGCTTTGTCATTGATCATTTTTGTGACAGGCAGGTCATCTTATCGTTATCGAACACCTAATGGAAGTCCTTTGACTCCTTTGTTGCATGTTCTTGTTGCTGCTTTTTCTAAAAGAAAGCTTCCTTATCCTTCTAATCCTACTCAATTGTATGAAGTTTCTTTGTCTGAGGGAAACAATGGAAGACTTCTTGCTCACACCAATAATCTCAAATTTTTTGACAAGGCAGCAATTGTTGAAAATGAAGGAAATTTATCAAAGAAACAGAGTCCATGGAGACTAACAACAGTGACAAAAGTTGAAGAAATGAAGCTAATGATAAACATGATACCCATTTGGATATTTACATTACCATTTGGAGTTTGTGCTTCACAAACATCAACTTTCTTCATAAAACAAGGTGCAACCATGAACAGAAAATTAGGCAATAATTTTGAAATTCCACCAGCTTCAATCTACACTCTTGCAGCCATTGGAATGATAATTTCTGTAGCCCTTTACGACAAGATCCTCGTACCTTTACTAAGAAAAATAAATGGAAATGAAAGAGGTATGAATATCCTTCAAAGAATTGGTGTTGGAATGCTATTCTCAATTATAACAATGATAGTAGCTGCTTTAGTAGAAAAGAAAAGACTTCAATCAAGAGAATCACTTCCTGCAATGAGTGTTTTTTGGTTGGCACCACAATTTTTAATTATTGGATTTGGTGATGGTTTTGCACTTGTGGGTTTACAAGAGTATTTCTATGATCAAGTTCCTGATTCAATGAGAAGCTTAGGAATTGCACTTTACTTAAGTGTAATTGGAGCTGCAAATTTTCTAAGTAGTTGGCTTATAACAATTGTTGATAATGTGACTAGTAAAAGTGGGAAAAGTTGGATTGGTAAGGATTTGAATAGTAGTCGTTTGGATAAATTCTATTGGCTACTTGCAGTTATAACCACAGTGAATTTGTTCATGTTTGTGTTCTTTGCTAGAAGGTATACTTATAAGAGTACAAGGGTGCAAAAAGTTGTAGTGGTTGATTCTTATGAAGGAAAAGGCGATCATGGTGGAGCTGTGGCGGTGGTTTGA

Protein:

Promoter(3k):

>AM05G005310.1
CTTGTACATCGACTTTACAGGAATGGGTTTATAATTACGTTTTTCCCCTTTACGAACTTTATACCTCGGCTTCCCACAAAATCTACAAGCCTGCAGCGCACCATTGGTTTTACCAAATTTGTTGTCGTAAAACAACATGCGCCCATCCTCACAACAATCAATCTTCTTACATTCCAATCCCAACTTCGAAACTAACATCTTTGCTTCATAATAACTTCTTGGCAAACTATCCTTATTAGGTGTCCCGTCCAACATCATTTGAGTCACAAAATCTAAACCCAACTCAGAAATATTGTTCATGGACTTGAGAGATAAAAGCTTCACGCACATAGATAATTTTGACTCTGGCGAGCCATCAAACAATGGTGTGTTTGACTCTTTTAACAAACAATAAAATCTTTGTGCTTCTTCATTTGGAAGTTCATCATGATCGTCATATTGAGGCTCATCAAATGGCACATTCACTGCGAGACCATCACAAATCATGCTTTCCATCGACTCAAATTGTTCATTAGATGGAACATCAAAACTAGAACTGCTTGAAGAAGCCCCTAAGTCAAAATTTGGAAGTCGTTCTCATGGTCCACCCAAATCCAATAATTAGGCCTAAACCCGATACAATACAAGTGCACCCTAATTTCATCATCAGGTGTAATAGGTATACCGTCACATTTAAGGCATGGACATCTAATCCCCCTTCCTTTTTAGCCTTATCATGTAGCCACGCTACCCTAATAAACTCTTCATCCCCATTTACAAAAGTTTCCTTCAAAAATGCTCTTCCCGGATATAACCGATCATACACCCAACTACGATTCAATTGATTCCAATTCATCTACACGCATTTAAAAAACGTGTTAGATTCCCACAACTAAACCTAAAATATAACCTATCAAGTTAGTGGCATCGATATGATCTCGGTGGAGTTGATTTCGAGCCAAATATGGGGGTTAAGGACAGAACAAACAAACCCTTTTCCATATAAGTAGTGAAGGAAGTTATTTCCAACCCCCAACCTTAAAATTGTTAGTATAGTCTCGCAATTATCTCAATGGAGATGATTTCGAGCAAAATATGGGGGTGAGGGACAACACCTCACCCTTTTCCATCAAAGGCACACAATATAGTCATCTAACCTAGGGTTCATCAAACATCAAAACAACAAAAATAAATTATAACAGGCCATATAGATAAACTATAACATGCTAATAACCAAATCATTTTTCACCAAATTTATTCATATTTCCCACCTATGAAGATGCATATAGATAAACTCTATATAAAAGTAGCTGAAACATGGTATTAAAAACATGATATTCAATAATCAAACAAATAGGCCAACAATCAAATAGCATATTTAAAGAAGGGAAAAGCACTATTGTGCTAAAAACCTTAAGGTATCTAAAGAGTGAGTGAGAGGAACTCACTTGTTGGGACTAATTTCTGGATTTTTCACAATATGTGTGTACCCATCAGAACCAAACAAGCTTCTATGACCCCAATTCGAAATGCCAAACTCCAGTACTCCTAACTTCAATGCTTGAGTGAACCCATCAATCCAAAAATCCAGTAAAAAGATTCTAGTTTCAACAAAAATAAATTACAACAAAAATAAAAAGGAAAACAAAAACGAAATCATAGAAAATGAAAACGAAAACAAAATCATAGAAAACGAAAACGAAAACAAAAACGAAAACGAAAACGTACCACACTTTGAGAGTGAATGGTGAGAGAAGAGAGAATGGTGGCGTTACTTGCTGCGACGGAGGGAAGGGGATGGGTGGTGGTGGCGTGGTGGTGGCGGAGATAACTGGGCGAGTGAGGTGAGAGTGAATGGTGAGAGAAGAGTGTGTTACGAATATAGGAAAAACTTACTTAAAATTAGCGAGGAATATTTAGCGACGAATTTGAATATTAGCGACGGAATTTAAATTTCATGCATTCCCAAACATTAGCGACGGAATAATAGCGACGGATTTGGGAATCTTACGATTTCCAAGATCTGCCAACAGTCACGTCACCGTTAGCGACAGATTTGAATTTAAAAAAAAATGGCTCGCCTTGTAGCGACGGATTGGGGATCCGTTGCTAAAATCTGTCGCTAATCCTGCATTTTTTAGTAGTGACTTAACCATTGTTATGCAAAACTGTGGTTAGTGGAATCAAACCACAGTTATGCATATCTGTTGTTAGTGGCCACTAACCATTGCTATGCACATGTGTGGTTAGTGACATCAAACCATTGACATCTAACCACAGTTATGCATATATGTGGTTAGTGACATCTAACCACATTTATGCATATCTGTGGTTAGTGGCCACTAACCATTGCGATGCACATTTGTGGTTAGTGACATCTAACCATTGTGGTACAAATCTGTGGTTAATGAACAATTTTTTTTATGAAAAAAAAACACCCAGAATTTTTTTGATAAAAGATGAAATGAGAGGTGCTTAAGCAGGAGCGAAAGAGAGATGAATTCGTTTCAGAAAATACGAGAGAGATGGAACGAAAGTTTGAAGCGTGATAGTAACGTTTTGAATTTGTTACCGTATTTGAAGCGAAATTTTAGCCAAAAATAACTCCTAAAAAATAGGGATATTGATTAACCATATTTTTAATTATTAGATAAGTTACCTATATACTCCTTTAGTAAGAAGTACCGTAAGTGATACTCCTAACGGTTTAAGATTTTAGTTTTGTTTTGATGAAAATATAATTCTTTATTCCTATTATTTTATTTTAATTGGCTTTCCTAGTCAAAAAATTTATTGTGTGTGTGTGAGAGAGAGAAATGGTTCCATTAATTATTCTAGAAATCTAGTGAGCTCTATAGCTAGTGGGTGAGAAAAGCAAATCTCATCCTCTATATAAGGGGAGGTTATATGGTAAGGTTGTCAATTCAGTAGCCACATCTATAGCAAGTTTCAATATTCTCTTTCAGAATAAATCAACTCTCAATAACAAGGCTAATATTCTTGCTTAGCTGGCACTGAAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00854.24	PTR2	109	524	2.00E-91
PF07690.19	MFS_1	91	509	8.80E-12

Gene family

Gene family	Subfamily
Transporter family	POT

Gene Ontology

GO term	Description	Category
GO:0042937	tripeptide transmembrane transporter activity	Molecular Function
GO:0042939	tripeptide transport	Biological Process
GO:0016020	membrane	Cellular Component
GO:0071916	dipeptide transmembrane transporter activity	Molecular Function
GO:0035442	dipeptide transmembrane transport	Biological Process

InterPro

InterPro term	Description
IPR000109	Proton-dependent oligopeptide transporter family
IPR044739	NRT1/PTR family
IPR036259	MFS transporter superfamily

trEMBL

trEMBL term	Description
A0A1S2YMT9	_

SwissProt

SwissProt term	Description
PTR28_ARATH	Protein NRT1/ PTR FAMILY 5.6

KEGG

KO	Description	Enzyme
K26562	MFS transporter, POT/PTR family, peptide/nitrate/nicotianamine transporter

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G37900	Major facilitator superfamily protein
Medicago sativa L.	MsG0480018890.01.T01	_
Oryza sativa L.	LOC_Os03g60850.1	peptide transporter PTR2, putative, expressed
Cucumis sativus L.	Csa017987	_
Glycyrrhiza uralensis Fisch.	Glyur001670s00039740.1	_
Codonopsis lanceolata	Cl_chr05_44020T	_
Arachis hypogaea L.	AH02G20290.1	Protein NRT1/ PTR FAMILY 5.7 like

Expression pattern