| Gene ID | Annotation |
|---|---|
| Am05G004210.1 | PIF1 helicase |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G004210.1 | mRNA | Chr05 | 28442593 | 28447528 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF05970.17 | PIF1 | 729 | 866 | 7.00E-116 |
| PF05970.17 | PIF1 | 866 | 1049 | 7.00E-116 |
| PF14214.9 | Helitron_like_N | 280 | 383 | 2.30E-29 |
| PF13604.9 | AAA_30 | 738 | 849 | 4.80E-06 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0032508 | DNA duplex unwinding | Biological Process |
| GO:0006310 | DNA recombination | Biological Process |
| GO:0005524 | ATP binding | Molecular Function |
| GO:0006281 | DNA repair | Biological Process |
| GO:0016787 | hydrolase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR025476 | Helitron helicase-like domain |
| IPR010285 | DNA helicase Pif1-like |
| trEMBL term | Description |
|---|---|
| A0A9D4XK09 | _ |
| SwissProt term | Description |
|---|---|
| PIF1_XENLA | ATP-dependent DNA helicase PIF1 |
| KO | Description | Enzyme |
|---|---|---|
| K15255 | ATP-dependent DNA helicase PIF1 | [EC: 5.6.2.3] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G51690 | PIF1 helicase |
| Medicago sativa L. | MsG0180005875.01.T01 | _ |
| Oryza sativa L. | LOC_Os12g25260.1 | expressed protein |
| Cucumis sativus L. | _ | _ |
| Glycyrrhiza uralensis Fisch. | Glyur002479s00038481.1 | _ |
| Codonopsis lanceolata | Cl_chr02_56230T | _ |
| Arachis hypogaea L. | AH06G11810.1 | ATP-dependent DNA helicase PIF1 like |