| Gene ID | Annotation |
|---|---|
| Am05G003310.1 | DEAD/DEAH box RNA helicase family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G003310.1 | mRNA | Chr05 | 23572688 | 23576253 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00270.32 | DEAD | 71 | 217 | 7.20E-33 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0003724 | RNA helicase activity | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| GO:0005524 | ATP binding | Molecular Function |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0016787 | hydrolase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR014014 | RNA helicase, DEAD-box type, Q motif |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR011545 | DEAD/DEAH box helicase domain |
| trEMBL term | Description |
|---|---|
| A0A8B8LHY4 | _ |
| SwissProt term | Description |
|---|---|
| RH56_ARATH | DEAD-box ATP-dependent RNA helicase 56 |
| KO | Description | Enzyme |
|---|---|---|
| K12812 | ATP-dependent RNA helicase UAP56/SUB2 | [EC: 5.6.2.7] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G11200 | DEAD/DEAH box RNA helicase family protein |
| Medicago sativa L. | MsG0480018366.01.T01 | _ |
| Oryza sativa L. | _ | _ |
| Cucumis sativus L. | Csa006097 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000220s00014788.1 | _ |
| Codonopsis lanceolata | Cl_chr03_18450T | _ |
| Arachis hypogaea L. | AH16G46750.1 | DEAD-box ATP-dependent RNA helicase 56 like |