Detail information of Am05G002840.1 Annotation
Gene IDAnnotation
Am05G002840.1 Pre-rRNA-processing protein TSR2, conserved region
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am05G002840.1mRNAChr051887351618878398-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF10273.12WGG15948.70E-21
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0006364rRNA processingBiological Process
GO:0005634nucleusCellular Component
GO:0042274ribosomal small subunit biogenesisBiological Process

InterPro
InterPro termDescription
IPR019398Pre-rRNA-processing protein TSR2

trEMBL
trEMBL termDescription
I3S1A5 _

SwissProt
SwissProt termDescription
TSR2_BOVINPre-rRNA-processing protein TSR2 homolog

KEGG
KODescriptionEnzyme
K14800pre-rRNA-processing protein TSR2

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G27990 Pre-rRNA-processing protein TSR2, conserved region
Medicago sativa L.MsG0580024146.01.T01 _
Oryza sativa L.LOC_Os08g39820.1pre-rRNA-processing protein TSR2, putative, expressed
Cucumis sativus L.Csa002247 _
Glycyrrhiza uralensis Fisch.Glyur001052s00025676.1 _
Codonopsis lanceolataCl_chr01_07930T _
Arachis hypogaea L.AH14G23540.1Pre-rRNA-processing protein TSR2 homolog like

Expression pattern