Gene detail

Detail information of Am05G002140.1 Annotation

Gene ID	Annotation
Am05G002140.1	pleiotropic drug resistance 12

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G002140.1	mRNA	Chr05	15101066	15107979	-

Sequences

CDS:

>Am05G002140.1
ATGAATGAGTTTGTACCTCAAAGAACTGCTGCATATATTAGCCAACATGATGTTCATATTGGAGAAATGACTGTGAGGGAAACATTAGCTTTCTCAGCAAGGTGTCAAGGGGTTGGATCACGTTATGACTTACTATCTGAGCTGTCTAGAAGAGAAAAGGAAGCAAAGATTAAACCAGACCCAGATATAGATGTCTACATGAAAGCAGCTTCAACTAAAGGTCAGGAAGCAAGTCTGCTAACAGATTACGTGTTGAAGATCTTAGGGTTGGATGTATGTGCTGATACAATGGTGGGGGATGAAATGCGGCGCGGTATATCTGGAGGACAAAGAAAGAGAGTTACCACAGGGGAGATTTCAACAACTTTCCAAATTGTGAGCTCTCTCAGACAATATGTTCACATTTTTAGTGGAACTGCAGTTATATCTTTGCTCCAGCCAGCACCAGAGGCTTATGAACTTTTTGATGACATTATTCTTATATCTGATGGTCAAATTGTCTACCAAGGACCTCGTGAATACGTTCTTGGCTTCTTTGAATTCATGGGTTTTAAATGCCCTGAGAGGAAAGGTGTTGCTGACTTCCTTCAAGAAGTAACTTCAAGAAAGGATCAAGAGCAATATTGGGTGTGCAGAGATGAACCACACAGATTTGTAACTGTTACTGAATTTGCCAAGGCATTTCAGTCATTCCATGTTGGGAGGAGAATTAGAGAAGAGCTATCAATTCCATTTGACAAATCAAATAACCACCCAGCAGCATTAACCACTAAAAAGTATGGTATTAACAAGAAGGAATTATTGAAGGCAAACTTCTCAAGAGAGTATTTACTTATGAAAAGGAATTCATTCGTTCACTTCTTCAAGATGTTTCAGATTACTATCATGGCAATAATTACTATGACAATCTTTCTAAGAAGTGAGATGCATAGAGATTCTGTGAAGGATGGAAATGTCTATCTTGGTGCTTTATTTTTCTCAATAATAGTGCTTATGTTTAATGGAACCGCTGAACTTACAATGACTATTGTAAAGCTTCCAACATTCTTCAAGCAACGAGACCACCTATTTTATCCTTCATGGGCATATGCCATTCCCTCATGGATCCTCAGAATTCCTGTTACATTTGTGGAAGCTTCTATCTGGGAATTCCTCACCTATTATATAATTGGATTTGATCCAAATATTTGGAGATTTCTTAAGCAGTATCTTCTGCTAATACTAATAAACCAGACAGCTTCTGGATTGTTCCGAGCTATTGCAGCACTTTGTAGGAACATTATTGTGGCTTCAATAACTGGGTTCTACACACTCCTAATATTTTTTACATTGGGTGGCTTCATTCTGTCAAGAGAGGATATCAAGAGTTGGTGGATTTGGGGTTACTGGATTTCACCTTTAATGTATGGGCAAAATGCTATAGTGGTGAATGAATTCCTTGGAAATAGTTGGAACAAATTTACACCAAATTCAAATAAAACACTGGGAATTCAAGTTTTGGAGTCTCGTGGGTTCTTCACACATGCATATTGGTACTGGATAGGGATTGGTGCATTGATTGGTTTTATGTTTCTTTGGAACATTGTATACACTTTGGCTCTCACCTTCCTTGATCCATTTGACAAGCCACAGGCAACAATAAGAGAAGAATCAGAAGCAAGTAATACACCTAATGATAGAGACAAAGAAGTTGAATTAAGGCACAGAAAGAGAAGAGGAATGGTTTTACCTTTTGAACCTTATTCTATAAGCTTTGATGATATTGTATACTCTGTTGACATGCCACAAGAAATGAAGGATCAAGGCGTAATGGAGGATAGGTTAGTGCTTTTAAAGGGTGTTAGTGGTGCATTTAGGCCTGGTGTTCTAACAGCCTTGATGGGTGTAAGTGGAGCTGGTAAAACTACTCTCATGGATGTTTTGGCTGGTAGGAAAACTAGTGGATATATTGATGGGAGTATAAAAATTTCGGGATACCCTAAAAAGCAAGAAACATTTGCTCGAATTTCCGGTTATTGTGAGCAAAATGATATCCACTCTCCTCATGTTACTGTCTATGAATCCTTACTCTACTCAGCATGGCTTCGTTTACCAGCAAAAGTTGATTCCAATACCAGAAAGATGTTCATTGAGGAAGTCATGGAACTAGTGGAGCTAGACCCACTGAGGAACTCACTAGTGGGCTTGCCTGGTGTGAGTGGTCTCTCAACTGAACAAAGAAAGAGGCTAACTATTGCAGTTGAATTAGTAGCCAATCCATCCATAATTTTCATGGATGAGCCTACATCTGGATTAGATGCTAGAGCTGCTGCAATTGTTATGAGAACTGTTAGGAACACAGTTGACACAGGAAGAACAGTTGTTTGCACCATCCATCAGCCAAGTATTGACATATTTGAGGCTTTTGATGAGTTATTCTTAATGAAGAGTGGAGGACAAGAAATATATGTTGGGCCCTTGGGTCGTCATTCTAGCCAATTGATCAATTACTTTGAGAGCATTGAAGGGGTTAGTGAAATCAAAGATGGCTATAACCCAGCAACGTGGATGTTGGAAATTACCACTCCAGCGCAAGAAAACTCTTTAGGTGTTGATTTTCATGGGATATACAAAAATTCTAAGCTGTATAGGAGAAACAAGCAACTCATAGCAGACTTGGGCAAACCTTCACCTGGTTCAAAAGATCTTCATTTCTCCACTCAATACTCACAGCCATTTTGGGTCCAATGCTTGGCTTGCTTATGGAAACAACATTGGTCATATTGGCGCAACCCACCTTACACTGCTGTGAGATTTTTCTTTTCTACTTTCATAGCCTTGCTGTTTGGAACAATGTTCTGGGACCTCGGAGGCAAATACTCAAGAGGACAAGACCTGTCTAATGCCATGGGTTCAATGTACACTGCTGTTCTCTTCATTGGGGTTCAGAATTCTGCATCTGTACAACCAGTGGTATCTATTGAAAGAACTGTATTTTATAGAGAAAGAGCTGCTGGAATGTATTCTGCATTACCCTATGCACTTGCACAGGTTATAATAGAGCTTCCTTATATTTTTGCACAAGCTATATCATATGGTGTAATAGTTTATGCCATGATTGGATTTGAGTGGAGTTTAGATAAGTTCTTTTGGTACATGTTTTTCATGTACTTCACATTTTGCTACTTCACCTTCTATGGCATGATGGCTGTGGCAGTTACACCAGATCACCATGTAGCTTCAATTGTTGCAGCTGCATTTTATGGAATTTGGAACCTCTTTTCAGGATTTGTAATCCCACGACCTAGAATCCCTATTTGGTGGAGGTGGTATTACTGGGCATGTCCTGTGGCCTGGACCCTATATGGATTGGTTGCATCACAATTTGGAGACATAACAGATATAATGGAATTAGAAGAAGTGTCAGTGCAAGAATACATAAGAATGTATTTTGGTATCAAACACGATTTCGTAGGGGTTTGTGCAGCTGTGGTTTTTGGGATAGCAGTACTCTTTGCTTCAATTTTTGCTGTTTCAATCAAGGTCTTCAATTTCCAACAACGATAG

Protein:

>Am05G002140.1
MNEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDLLSELSRREKEAKIKPDPDIDVYMKAASTKGQEASLLTDYVLKILGLDVCADTMVGDEMRRGISGGQRKRVTTGEISTTFQIVSSLRQYVHIFSGTAVISLLQPAPEAYELFDDIILISDGQIVYQGPREYVLGFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWVCRDEPHRFVTVTEFAKAFQSFHVGRRIREELSIPFDKSNNHPAALTTKKYGINKKELLKANFSREYLLMKRNSFVHFFKMFQITIMAIITMTIFLRSEMHRDSVKDGNVYLGALFFSIIVLMFNGTAELTMTIVKLPTFFKQRDHLFYPSWAYAIPSWILRIPVTFVEASIWEFLTYYIIGFDPNIWRFLKQYLLLILINQTASGLFRAIAALCRNIIVASITGFYTLLIFFTLGGFILSREDIKSWWIWGYWISPLMYGQNAIVVNEFLGNSWNKFTPNSNKTLGIQVLESRGFFTHAYWYWIGIGALIGFMFLWNIVYTLALTFLDPFDKPQATIREESEASNTPNDRDKEVELRHRKRRGMVLPFEPYSISFDDIVYSVDMPQEMKDQGVMEDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYIDGSIKISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLPAKVDSNTRKMFIEEVMELVELDPLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKSGGQEIYVGPLGRHSSQLINYFESIEGVSEIKDGYNPATWMLEITTPAQENSLGVDFHGIYKNSKLYRRNKQLIADLGKPSPGSKDLHFSTQYSQPFWVQCLACLWKQHWSYWRNPPYTAVRFFFSTFIALLFGTMFWDLGGKYSRGQDLSNAMGSMYTAVLFIGVQNSASVQPVVSIERTVFYRERAAGMYSALPYALAQVIIELPYIFAQAISYGVIVYAMIGFEWSLDKFFWYMFFMYFTFCYFTFYGMMAVAVTPDHHVASIVAAAFYGIWNLFSGFVIPRPRIPIWWRWYYWACPVAWTLYGLVASQFGDITDIMELEEVSVQEYIRMYFGIKHDFVGVCAAVVFGIAVLFASIFAVSIKVFNFQQR*

Promoter(3k):

>AM05G002140.1
TTATTAAAAGTAACGAGGGACTAAAATTACTGATGAAAATAAAATAAAATGTAGGGACCAAAAGTAGGTGAATTTTTTTGAGGGACTAAAAACAAAAAACTCAAATTTTATAGGTACCACAAATATATTTAACCCACAAATAAATATACAATAACCATTTATGCGGTTTGGTTTGGGTGGTTCAATTGTAGGTAAGAAAATCATAAATCAAACCCCAACCGCTCGATTGACAGAAAAAATGACCCCAACACACACAAAAAATTATTTTTTTTTTTTGCAGTTTGAGTAGCTACGTACTTATTCCCTAAGTACAAGGTTCAACGCCTCGAAAGGCAAAAATCCCAAATTGATTCAAGTGTGACTAAGGGGGCGAGAAGATCGCCGTTGACAAAATCAATAGCACGAGAGGGGTGACCAGTCTGTTACAAAAATGGTGCCTTCATATTATCAAATCACACTTCATAATTAAATACATCAAGATCCACCAAACATTAAAATTGTAATTTTACAGATACATTAACAAAATTGTAGTTAAGCTTTAGTCCTAATCCTATACACTTTCCTAATTTAACTCTAACTCTTTAAGATACCTTATTTGGTAACTAGTCCTTAGATTTCTCATATCTTACTTTCTTTTCCTTAACTAACTCCCCACTTTACTTCCTAATTTGTTGTCAAAATCATATTAAAAAGAGTGTCATGTATTATGTAAACAAATAGAGTTTAATTACTACGCATTGTCGGCGTAAGTTTTACACTCACAACCAATCACAATTCACAGTATAAGTGGCATATAAGGTGATTATTAATTAGTTGACTCAAGTCTTTTTAATGACATATCTACTTATAATCGGTTGATAGTGTAAAACATGTATATACCGATAGTTTATATAAATTAAATCAATATAAAGATATAAACTCATTTAAACATATTTTTTTTTTTGCATAGAGTAGGCACAAATTTATAAACAATCTATTTTTACTAAGTTTCCATTATCCCAGGTAAATTGGGCATTAAGAAAAAAGTTTATGCAATTTGTTTCAAAACTACTCTCTCTCAATGAGATTGATTGATAGATAGAACTCAAACTACCAACTCTCAACAACAACCTTGGGTTTCAAATTTCAACGCCATGCATTAATAAAGCGGTATGATGTCTAAAACAATTAATAAAACGGTATATCTCACTAGGCCTATGCCAATATGTTTCCTTGTATGGTACCGACCCATTTAAACATCAAAGAAATACTGTTAGTTTAGAACAACAAAAATAGTAAGCAATTAATTAGCATTAAAATATCGGTATAAATAGGCTATGTCTTCTCATAACTCTCATAGTTTCAATTTAAAAAAACCAAAGCCAAATATACATATGCAAAGAACCTATAGTTCTTTTCTCTTAGTTTCATATTCTTGTGTAAAGAAAAGTACTGCATTATTAGCATTGAAGTAGAACAAGGCTTTGTATTTTGGTGGCAGAAATGGATGGAGGGTATATATATAGAGCAAGTAGTAGTCTAAGAGGGAGCTCTAGTTCAACATTTTTCTCGAGATCTTTGCGGCGTGAAGAAGATGATGAAGAAGCTCTGAAATGGGCTGCACTTGAAAAACTTCCTACTTACAATCGTTTAAGGAAAGGGTTGTTGACCACATCACATGGAGTTGCCAATGAAATCGATGTAACTAAACTTGGATTCCAAGAAAGACAGAAACTGTTGAATAGGTTGATCAATGCTGCTGAAGAGGATAATCAGAAGTTTTTGTTGAAGCTCAAAGAACGAATTGATAGGTAACAAATATGATAGTGAAGTGATCTCTTCTCTTCTCTCCTTTCTTTTCATTCTTCAAACTTTATAATAATATTGTTTATAAGCTAACAGTTATTATGAAGCACTGACTCAGACACAAACACGACACGGACATGGAAACGCAGACACCGGTTTTAATTTAAAAAATACAAGTAATTGGAGTGTCTTTTGATTGAATACGTGTCGGACACGGGACACGTCTTCAACCAAAAGTGTCGGTGCTACATTATATATTCTAGAGGTTATTATATATTCAAGTATTCAACCTCTTTTTTTTTTTTTTTTCAGAGTTGGGATTGACATTCCAACAATTGAAGTTAGATATGAGAAACTAAGTGTTGATGCAGAGGCTAATGTGGGAAGTAGAGCTTTGCCGACATTCCTAAATTTTACTATTGGCATAGTGGAGGTAAATATAAGCAGATGATAGCTCAAAAGTTTGTCTTTCTCAATTATTTTTTGGAAATGGATCTTGGGCGGTCGCCGTTTTGGTATATTTGGGCAGTCAACACATTTGGACCGTCTGGCAGATGGTCTAGATTTATAACTTTAAAAACAGATAAAAACATAACGTTTAAAAGTGGGCCTGTCTGATCAATATCGAACTGTCCAAATCTACTGACTGCACGACTGCATCAATCACCGACTGCACATGATCCGGATCCTAGTTTTTTTGTGTTGTGTTTCTTTGTTCTGCATTTTATCTCACACTCATACAACCTTTCTCTCTTTCGTTTTCTAGAGTTTCCTTACTTCTTTGCATATTCTATCACGCAAAAAGAAACATGTGACTATCCTTAAAGATGTTAGCGGAATCGTCAAACCTCGAAGGATGACATTGCTTCTGGGTCCACCGAGTTCTGGAAAGACCACACTCCTTTTGGCTTTGTCAGGAAAGCTTGATAAAACTCTCAAGGTGCAAAGCAATATCCCCTAGCTTAACAAATACTACCTTTGATTCATTTTATAAGAGACAATGCAGTTTTTAGTTCATTGAATAACTCATGTATCTAGTCTATATTATAATCAGTTATTCAATGGACTAAAAGCTACATCGTCTCTTATAAAGTGGACCAGAGGTAATATGTGATGTGTTTATTCATTTTCTAATAGAAAGTGGTAATTTTCATCTAATTTGGAAACTCTTGTGTCCTCAAGGTATCTGGGAATGTGACTTATAATGGGCATGGA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01061.27	ABC2_membrane	267	479	5.40E-96
PF01061.27	ABC2_membrane	909	1122	5.40E-96
PF08370.14	PDR_assoc	484	547	8.80E-29
PF00005.30	ABC_tran	611	763	3.20E-24

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0140359	ABC-type transporter activity	Molecular Function
GO:0055085	transmembrane transport	Biological Process
GO:0016020	membrane	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR013581	Plant PDR ABC transporter associated
IPR034003	ATP-binding cassette transporter, PDR-like subfamily G, domain 2
IPR013525	ABC-2 type transporter
IPR003439	ABC transporter-like, ATP-binding domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A8B8KNA4	_

SwissProt

SwissProt term	Description
PDR1_TOBAC	Pleiotropic drug resistance protein 1

KEGG

KO	Description	Enzyme
K08711	ATP-binding cassette, subfamily G (WHITE), member 2, PDR

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G15520	pleiotropic drug resistance 12
Medicago sativa L.	MsG0680034333.01.T01	_
Oryza sativa L.	LOC_Os01g42380.1	pleiotropic drug resistance protein, putative, expressed
Cucumis sativus L.	Csa018206	_
Glycyrrhiza uralensis Fisch.	Glyur000041s00007110.1	_
Codonopsis lanceolata	Cl_chr01_62180T	_
Arachis hypogaea L.	AH19G02810.1	Pleiotropic drug resistance protein 1 like

Expression pattern