| Gene ID | Annotation |
|---|---|
| Am05G002010.1 | NUP50 (Nucleoporin 50 kDa) protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G002010.1 | mRNA | Chr05 | 14561976 | 14565029 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00638.21 | Ran_BP1 | 322 | 435 | 2.90E-19 |
| PF08911.14 | NUP50 | 13 | 74 | 3.20E-14 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0005096 | GTPase activator activity | Molecular Function |
| GO:0046907 | intracellular transport | Biological Process |
| GO:0016874 | ligase activity | Molecular Function |
| GO:0015031 | protein transport | Biological Process |
| GO:0005737 | cytoplasm | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR045255 | Ran binding protein RanBP1-like |
| IPR000156 | Ran binding domain |
| IPR011993 | PH-like domain superfamily |
| IPR045207 | NUP50, Ran-binding domain |
| IPR015007 | Nuclear pore complex, NUP2/50/61 |
| trEMBL term | Description |
|---|---|
| A0A8B8KLK3 | _ |
| SwissProt term | Description |
|---|---|
| NU50A_ARATH | Nuclear pore complex protein NUP50A |
| KO | Description | Enzyme |
|---|---|---|
| K15304 | Ran-binding protein 3 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G52380 | NUP50 (Nucleoporin 50 kDa) protein |
| Medicago sativa L. | MsG0480018461.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g28190.1 | ranBP1 domain containing protein, expressed |
| Cucumis sativus L. | Csa010069 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000317s00022167.1 | _ |
| Codonopsis lanceolata | Cl_chr02_05550T | _ |
| Arachis hypogaea L. | AH18G01240.1 | Nuclear pore complex protein NUP50A like |