Detail information of Am04G030680.1 Annotation
Gene IDAnnotation
Am04G030680.1 Tetratricopeptide repeat (TPR)-like superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am04G030680.1mRNAChr04180150499180154272+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13041.9PPR_21822282.10E-64
PF13041.9PPR_23884342.10E-64
PF13041.9PPR_24915372.10E-64
PF13041.9PPR_25916382.10E-64
PF01535.23PPR3914199.40E-54
PF01535.23PPR5946249.40E-54
PF13812.9PPR_36156702.30E-20
PF20431.1E_motif7137747.20E-18
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0016787hydrolase activityMolecular Function
GO:0016020membraneCellular Component
GO:0005737cytoplasmCellular Component
GO:0000959mitochondrial RNA metabolic processBiological Process
GO:0016071mRNA metabolic processBiological Process

InterPro
InterPro termDescription
IPR011990Tetratricopeptide-like helical domain superfamily
IPR046960Pentatricopeptide repeat-containing protein At4g14850-like, plant
IPR002885Pentatricopeptide repeat
IPR046848E motif

trEMBL
trEMBL termDescription
A0A1S3E0U1 _

SwissProt
SwissProt termDescription
PP246_ARATHPentatricopeptide repeat-containing protein At3g22150, chloroplastic

KEGG
KODescriptionEnzyme
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Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT3G22150 Tetratricopeptide repeat (TPR)-like superfamily protein
Medicago sativa L.MsG0080048811.01.T01 _
Oryza sativa L.LOC_Os04g51350.1pentatricopeptide, putative, expressed
Cucumis sativus L.Csa015558 _
Glycyrrhiza uralensis Fisch.Glyur000059s00006311.1 _
Codonopsis lanceolataCl_chr08_06330T _
Arachis hypogaea L.AH16G26080.1Pentatricopeptide repeat-containing protein At3g22150, chloroplastic like

Expression pattern