Gene detail

Detail information of Am04G030530.1 Annotation

Gene ID	Annotation
Am04G030530.1	acetoacetyl-CoA thiolase 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G030530.1	mRNA	Chr04	179816701	179821665	-

Sequences

CDS:

>Am04G030530.1
ATGGCTCCAGTGGCAGCAGCTTCTTCGGACACTATAAAGCCTAGAGATGTTTGTATTGTCGGTGTTGCACGTACACCAATGGGTGGGTTTCTTGGTACTCTTTCATCTGTACCTGCCACCAAGCTAGGCTCTACAGCTATTGAAGCTGCTCTTAAAAGGGCCAATGTTGATCCATCACTTGTTGAAGAAGTATTCTTTGGGAATGTCCTTAGTGCCAATTTGGGGCAAGCTCCTGCCAGACAAGCTGCTCTTGGGGCAGGACTACCAAAATCAGTAGTGTGCACTACTGTTAACAAAGTTTGTGCATCAGGAATGAAAGCTACAATGCTTGCTGCACAGAGTATTCAGTTAGGCATAAATGATGTTGTTATTGCTGGTGGTATGGAGAACATGTCTAGTGTACCCAAATACCTGGCAGAAGCAAGGAAAGGATCCCGCCTTGGACACGATTCACTTGTTGATGGGATGTTGAAAGATGGTTTATGGGATGTCTATAAGGATGTTGGTATGGGAGTGTGCGCAGAACTGTGTGCAGATAACCATTCAATATCCAGAGAAGACCAGGATAACTATGCAGTTCACAGTTTTGAACGGGGAATTGCTGCCCAAGAAAGTGGTGCCTTTTCGTGGGAAATTGTTCCAGTTGAAGTCTCTGGTGGAAGGGGAAGACCGTCAACAATTGTCGATAAGGATGAAGGCCTAGGAAAGTTTGATGCTTCCAAGTTACGCAAACTCCGACCAAGTTTCAAGGAGAGTGGAGGTTCTGTTACTGCTGGCAATGCTTCTAGCATAAGTGATGGTGCTGCTGCCTTAGTTTTGGTGAGCGGAGAGAAGGCATTGAAGCTTGGACTTCAAGTCATTGCAAAAATATCTGGATATGCTGATGCTGCTCAGGAACCAGAGTTATTTACAACCGCTCCAGCACTCGCAATCCCCAAAGCTATTGCCAATGCAGGGTTGGAGGCTTCACAAGTTGATTTTTATGAAATTAATGAAGCCTTTGCCGTTGTGGCACTTGCAAATCAGAAACTTCTCGGACTTAATTCGGAAAAAGTAAATGTGCATGGTGGAGCAGTATCATTGGGTCATCCTCTTGGTTGCAGTGGTGCACGTATCCTGGTGACACTTTTGGGGGTACTGAAGCAGAAAAATGGGAAATACGGTGTTGGTGGCGTTTGCAATGGAGGAGGTGGTGCATCTGCCCTTGTAGTGGAGCTTCTCTAA

Protein:

Promoter(3k):

>AM04G030530.1
GTGTAAAGTAGATAGTGTATTAATATATAGGGTAAGGGGGGAGGGGGGTGTTTTTGGCGCTCAAATTGGCAAAAGATATTTTGAGTATTTGACCGGTTAATTTTTTTCGAACACCGAAGTGTCTCAAAACACGCTGATTAGCATCACACTTTATGTATTTTGTAACGAAATTATATTTTTTCCCACTAAACTGGTTAGAGGTACAAATTTTGCATATTTGAATAGTTGGATTTTTTGGGAACACTAAAGCAAAAAAAAAAACACACTATTGTGAATACTGAAGCATCCCAAAACATACTACTTAGCATTGTACTTTACTGATTTCGTTATGATTTTTTTCACCAAACAGGTTACTGATTTGTCACGAAATTTTGTAGTATCCCAAAACATACTACCTAGCATTGTACTTTACTCATTTTGTTATGATTTTCTTTTCACCAAACAGGTTACTGAGGAACAAACTTTACATAATTTATCACGAAATTTATTTTCATTTTTCACCTATTCGATTATCGAGGAACAAACCTAATATATTTATAGATCAATTTTTTTCCTAAATTTTTATGTATTCCAAAAAAAAATGAAAAAAAGAAGAAGAGGGGGATAGCGGGTGTTTTTGGCGTTCAATTGGTGTAAAGTAGATAGTGTATTAATATATAAGGTTAGCATTGTACTTTACTCATTTCGTTATGATTTTTTTTTCACTAAACAGGTTACTGGGGAACAAACTTTTACATAATTTATCACGAAATTTATTTTCATTTTCCACCTATTCAATTATCGATGAACAAACCTAATATATTTATAGTAAAAATGTTTTTCTAAATTTTTATGTATTCCAAAAAAAAATGAAAAAAAGAAGAAGAGGGGCGTAGGGGGGATAGTGGGTGGGGGGGGGGGGGGGGGGTAGGTATGTATTCAAAAAAAAATGAAAAAAAGAAGAAGAGGGGGTAAGGGGGGGAGGGGGTGTTTTTGGCGTTCAATTGGTGTAAAGTAGATAGTGTATTAATATATAGGGTTAGCATTGTACTTTACTCATTTCGTTATGATTTTTTTCACCAAACTGGTTACTGAGGAACAAACTTTGCATAATTTATCACGAAATTTATTTTCATTTTCCACCTATTCAATTATCGAGGAACAAACCTAATATATTTATAGTAAAAAAAAATTTCTAAAATTTTATGTATTTAAAAAAAAATGAAAAAAAGAAGAAGAGGGGGGTAGGGGGGATAGTGGGTGGGGGGGAGGGGGGATTTGGCGCTAAAAAAAATGCAAAAGTCGATGTTGGATTAATATATGTAGATAACTATACGTTATTGTTGGATGTGTGTCTAAAATATATTTAGACAGATTATATATATATATATATATATATAGGCTAAAGTGCTCCCGGGGTCCTTTATCTTTATTTAAAGTAACGAATTAGTCTTTTATGTTTTTTTTGTCTCAAATAAGTCCTTTATCTTTCAAATTTTTGACACATAAATCCTTTTCCGTTAACAGTGCTGATTTATGTGTCAAAAAAGGATTTATATGTTAAAAATTTGAAACATAAAGGACTGATTTGGGACAGAAAAGGATTTATGTGTCAAAAATTTAAAACATAAATGACTGATTTGGGACAAAAAAAAGATAAAGGACAAAAAAAAAATAAAGGACCAAATCGTTACTTTAAATAAAGATAAGGGACCCCGAGAGCACTTTAGCCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCAATTAAGATTTTTGGTCAAAAATATACATCATTATGATTTAATTGATATACACAATACGTGTATAAGTGTTTTCCACATCTACCAATTATAAATTGACAGTTATTAAAAAGTTAATCAATTAGTGACCATTTTATATGTCAATCATACTATGAATTGTTATTGATTGTGGTTGTAAACAGATTTACATCGCTAGTGCGTGGCAATTAAACTCTATCAATTAAGTAAGTCTTCAAGATAATCGTTATTGACAAAAAAATGTGAAAAATAAAAAATACAAATATTGTTTTTCTGCCACAGAAAAACTTGGGAAAACAAGGGAAGTAGTTGGGTTTTTAAACCTCAAATCAAATGGTATCAATAACAATAGTTTTTTATTTTTTTGAAAAAATCAATAACAATAGTGAGTTCCCAATCAAAAATAAAAAAAGTGAGTCTCGTTGTGTTGGCTAGAAGAAGAAGAGTGCGTGTACCTCGTGGCTTGTCCCACATGGCAAGCAGTATATAAACACTCAATTCATGCGATCAAACACAATTCTTTACTCGTCGTCATCATCATCATCATCATCATCATCATCACACTCCTCCTTCGTTTTCTCCTTCGCTTCCTCTCTTCAACAACGCAACACACCTAAAGGTAACCAACCCTCCTTTCTCCTTAAACTTCTCTCTTAGCTTACTTCTTTCAGATCTATGTTTCGTTAAATCCAAATTGAATGCGATATTTGATTCATTAATTGATTAATGGTTATCTGATTTGGTATTTTGTTAATTCTATTTCTCTACTAGATCTTTATTATTTCATCGTTTCTCATAGCGTCTCCTTTCTTTGCTTACATATATAATGCGTAGAAAAATAATACAACTCGTACAGTTTTAGTTCTAAATAAATGGTTGAATATGTAAACATCAAATTGCACAACTACTTTCTATTATGCCCCCATTTGTTTTGCCTTTCATTTGAAAAAAAAAATGAAATTGTTATTGGCTCTTGGATGGATTAGGGATCCTCACCACATTCACTCATCAACCAACCAAGCTTCAAATCTTTACAAATATTCTGTCAGATTTTCAATACAATCAATCATATATGAAGCTAATTCTTAGTGATTATTTATGTGTCAGATTGGTAATGTGTAGGCTGGTTAATTAAATTTACATACATTCATTTTTTATGTTTTTGGTTACAGATTCAATTTTCATCTGTCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00108.26	Thiolase_N	17	275	5.50E-92
PF02803.21	Thiolase_C	285	405	4.80E-45

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0005777	peroxisome	Cellular Component
GO:0003985	acetyl-CoA C-acetyltransferase activity	Molecular Function
GO:0006635	fatty acid beta-oxidation	Biological Process
GO:0005739	mitochondrion	Cellular Component
GO:0009507	chloroplast	Cellular Component

InterPro

InterPro term	Description
IPR016039	Thiolase-like
IPR020616	Thiolase, N-terminal
IPR020617	Thiolase, C-terminal
IPR020613	Thiolase, conserved site
IPR020610	Thiolase, active site
IPR002155	Thiolase

trEMBL

trEMBL term	Description
A0A8B8MPL4	_

SwissProt

SwissProt term	Description
ACCT2_ARATH	Acetyl-CoA acetyltransferase 2

KEGG

KO	Description	Enzyme
K00626	acetyl-CoA C-acetyltransferase	[EC: 2.3.1.9]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G48230	acetoacetyl-CoA thiolase 2
Medicago sativa L.	MsG0580030162.01.T01	_
Oryza sativa L.	LOC_Os09g07830.2	acetyl-CoA acetyltransferase, cytosolic, putative, expressed
Cucumis sativus L.	Csa007100	_
Glycyrrhiza uralensis Fisch.	Glyur000218s00011642.2	_
Codonopsis lanceolata	Cl_chr01_46260T	_
Arachis hypogaea L.	AH17G00760.2	Probable acetyl-CoA acetyltransferase, cytosolic 2 like

Expression pattern