Gene detail

Detail information of Am04G029790.1 Annotation

Gene ID	Annotation
Am04G029790.1	Leucine-rich receptor-like protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G029790.1	mRNA	Chr04	177755410	177759173	+

Sequences

CDS:

>Am04G029790.1
ATGTCATTTCTTCACAAAATCTCCCTTCTCACCTTGATACTCTCAATAAGCTCTTTTTTCTTTACATGTTGTAACTCTCTTGATGAACAAGGCCAAGCTCTTTTAGCATGGAAGGAGAGTTTAAACAGTACTGCAGATGCATTAGCATCGTGGAACCCTTCAAACACAAGTCCATGCAACTGGTTTGGAGTGCACTGCAATTCACAAGAAGAGGTGGTGGAGATAAACATGAATTCCATGAACTTGCAAGGTTCATTTCCTTCAAATTTTCAACCTTTGAGATCCTTGAAGGTTCTTGTTCTCTCATCAACTAACATCATAGGAAGGATTCCAAAAGAAATTGGAGAGTATCAAGAACTCATTGTCATTGATCTCAGTGGCAATTCTCTCTTTGGTGAAATCCCAGAAGAAATTTGCAGGCTAAGAAAACTGCAAAGTTTAGCTCTCCATACAAACTTTCTTGAGGGAAATATTCCATCTCACATAGGAAGTTTATCAAGTCTTGTGAACTTGACACTCTATGATAATAAACTGAGTGGTGAAATTCCAAAGAGTATTGGTTCCTTAAGCAAGCTACAAGAATTCAGAGCAGGAGGGAATGAGAACCTCAAAGGTGAGCTTCCATGGGATATTGGAAACTGTACTAACTTAGTCATGTTAGGCCTTGCAGAAACCAGCATTTCTGGTAGTCTTCCTTCTTCAATAGGGAAGCTGAAAAGAATTCAGACGATAGCCATTTACACGACTCGGTTATCAGGCTCTATTCCAGAAGAGATAGGGAATTGCAGTGAACTGCAGAACCTGTACTTGTATCAGAACTCAATTTCTGGTTCAATTCCACATCAAATTGGAGAGCTCAACAAGCTTCAGAATCTACTCTTATGGCAAAACAATATCGTCGGTACCATCCCGGAAGAGATTGGTAGCTGCAAAGAGCTTAGTGTCATAGACTTATCAGAAAATCTTCTCACAGGTAGCATACCAATCAGTTTCGGACAGCTGTCAAATCTCCAAGGTCTTCAGCTGAGTGTTAATCAGCTGTCAGGTACTATACCTCATGAAATTTCAAACTGCACTTCATTGACTCAGCTGGAAGTTGACAATAATGCTATTTCTGGAGAGATTCCTTCAGTTATTGGCAACTTGAAAAGCTTGACACTCTTCTTTGCCTGGAAGAACAAGCTAACAGGAAAAATCCCGGATAGTCTTTCACAGTGCCGAGATCTTCAAGCGCTCGATCTGTCTTACAACAACTTAACTGGTCCAATACCGAAACAACTATTCGGTTTGAGGAATCTCACTAAATTGCTGCTTCTTTCCAATGACTTGTTAGGCTTAATACCACCTGATATAGGGAACTGCGCAAGTCTCTATAGGTTGAGGTTAAATCAAAATAGATTGATTGGTACTATTCCATCTGAGATTACCAATTTGAAGAATTTGAGTTTTTTAGACATGAGCAGCAATCATCTTGTAGGAAAGATTCCTCCAACAATATTCAGATGCCAAAATCTTGAATTCCTGGATCTCTCCCACAACAAGCTCTCAGGGAATTTAGATGCTCTTTCTGACCTTCAAAATTTAGTCTCCTTAAATGTTTCCTTTAATGACTTCTCTGGTGAACTTCCTAACACCCCATTCTTCAGGAACCTCCCTCTCAGTAATCTCATTGCAAATAATGGTCTTCACTTTTCCGATGACGTTGTAACTCCCGCTAACAGAATTGGAGCCAAAGATCATGCCAGATTAGCTATGAAGATTATATTGTTCATTCTCTTAAGCACCAGTGCAATACTAGCATTGCTCACAATCCGTGTATCGGTTCGTGCTTATATAGCTAACAAAGCACTCGTGGCGAATAACAGTTGGTTGATGACTTTGTATTACAAGTTTGAATTCTCTATTGATGACGTTGTCCGGAGTTTGACGTCATCGCACGTGATTGGAACTGGAAGCTCTGGAGTTGTGTACAAGGTAACAGTTCCAAATGGACAAACACTAGCAGTTAAAAAGATGTGGTCATCATCTGAGTCTGGAGCATTTAGTTCTGAAATTCAAATGCTAGGTTCAATCAAGCACACGAACATAATCAAGCTTCTTGGTTGGGCATCTAGTAAGAATATGAAGCTGCTATTTCATGACTACCTTCCTAATGGAAGCCTAAGCTCATTACTTCATGGTTCAGGCAAGGAAAAACCAGAATGGGAAACTAGATATGAAGTTATCTTAGGCCTGGCTAAGGCACTTGCATATTTGCACCATGATTGTGTGCCTTCTATTTTGTATGGAGATGTCAAATCCAGCAATTTGTTATTAGGTCCTGGCTATCATCCTTACCTTGCTGACTTTGGCCTAGCTAGAATTACAAGTGAAAATGGTGACAATACTAACTCCAAGCCAGTTCAAAGGCCTCCCTTCCTTGCTGGTTCCTATGGATACATGGCTCCAGAGCACGCATCAATGCAGCGGATCACGGAGAAAAGTGATGTATACAGTTTTGGTGTGGTCCTACTTGAGGTGCTGACAGGAAGACACCCATTAGACCCAACTCTACCTGGGGGTGCAGACATAGTGCAGTGGGTTAGGAAGCACTTGGCCAGAAAAGTAGACCCATCTCACATTCTTGACCCAAAGCTGAGAGAGAGGACTGATCCTACAATGCATGAAATACTACAAACTCTAGCTGTATCACTTCTCTGTGTCAGTACAAGAGCTGATGAACGTCCAACAATGAAGGACATTGTTGCTATGCTCAAGGAAATTCGAACTGCTGTTGAAGCCTCAAGGGCATGTCCTAAGAATGTAGTTTCAGATGAACCTTCTAATTGTTGA

Protein:

Promoter(3k):

>AM04G029790.1
CTAAACTGAACTCCAACATGAGGCTTATGAGATTAAAATAACGCAAACTCTTAATATTTGCTTCAATATACTTTTAATACTATTTTCTTGTATTTCTTGTTTAATTAGAGTTGGAGAATCTTGTAACAAATTAATTAAAAAAATCTAAACAAAACATGCCCCAACAGGATCAAACATTTTGTCAAAAGAGTCGAACTTTACCATTACTTACAATTTGAGCTAGCAACAATTTCTTGTGTGAAAACATAATTTACGACGTAATATTACGTAAAAAAAAATTGAGACCCCTTTTTTATCAATTTTTTTAGGCCCAGAGCCCTTAGTTTAGTTGCTTGATTGTCGTGCGTGCCACACAAAGATACACTTTGAGTACCATAAATTTAGCCTTTGTTAAATTATCTCACTTAGAAATTCTAATATTGTGTGGCTTTGATCTTCTTACGGTAAATCAACTAACTACTTAAATTGTAATGAACTTATAATTCCTTATTTTTTTGTGAAATATTTATAATTAAACTATCTTAAACCAATTATTGCTAGAAGTTGTTTACACATGCTTCACTCGGAAGCTGAAAAATGGCTTTTACATTCTTCCAATAATATCTCTTCCCTGCCTGAGATAAGCAACAGCAACTGTAATTCTGTGAATGAATCAAGGTTGGGATGAAAACAAGAACTTCAAATATTACAAGTTATCTAATTGATCAGTGAATAATACCAAATTAATAGTAGAATAGATTCATAGATGCCACTGTCTGTTATTTTGTCCTTTCCACTCTTTGCCAGCATAGCTTCATTGCTTTCTTTTACTTCTTTGGAGAAAAGACCAGCTACCACTATAGCCAGATCTTGCAGATTAAAATTCCATTTTGGTTTAAATACGTTTTTACCCCTGCAAATAGGGGGTGTTTTGCTTTTACCCCCTGCAAATTTTTATTTTTTTTTTAAAAACACCTTGCAAATATCACTTTTTTGCTTTCAGTCATTCTGTTAAAATGGACGTTACAAAAATGTCTACATGGCATTTTTTATTCTTTTCTAATTTTTTTTAATGTTGAATGGGCTGCCATGTCATTAGTTTTTATTTTAATTAATTTTAATTAATTGAGAGAGAGAAATCTACGGGGGAGAGAGGGAAGAGAGAGAGAGCCCAACGAGAGAGAGGAGTATTGAGAGAGAGAAATCTGAGGGAGGGGAGTATTGAGAGAGAGAAATCTGAGGGAGTGGTTATGATGGTGGTGGTGCTCGCCGCCGCCAACGACAAAAATGGAGAGGGGGGAGGTGACGGTTTCGGTGGTGGTGAGAGGTGGCTGTGGTGAGATCTTCTTCTCCCTTTTTCTGGGTTCATTTCGTTTTTATGGTGGAGGGGTTACGGTGGCAAAAGGGGAACAGATCTGGCAAAAGGGGGACGAGGCTTCGCGAAAATGGTGCCTGTGGTGAGATCTTCTTCTCCCTTTTTTCTGTGGTGGTCGTGGTGGCTTGCGGTTTCTTGTTTCTTCTACGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAAATTTTGAAAATTTCGTGGAGAGAGGGAAGTTTCAGGGAGAGAGAAAGAGACGGTGATTGAGGAAGAGAAGTGGAGGACGAACGACGGTCTGAGAGAGGGAACGACTGAGAGAGACAGTGGTGTGGGGTGGTTGACGATGCGAACGGAGACGGAGGGACGATGGGGCGAGATTCGTGAATGGAGGGAGGGGAAGACAGTGACGACGAGGGTTTGTGAGAGTGTGGAAGTGACGATGGGGCGAGATTCGTGAACGGAGGGAGGGGAAGATTAATCACAAATATTCCAGTAATTTGAGTCATTTTGAGTGTAACTACTAATGGCCAATTTTAGATTTTGGCACTTTGCGCTCTTGAGAATATGATTCGAGAGGAACTCTAACAACACACTCTCTTATCGGTTGAAGTCAAATGAGATTCATATGACTTGGTCGGCCCCACTACAATAAATAGTTGGATTTACTTGAATTACAACTAATAAAAGTATGTGTCGAAAAGAGTGTGTTGTTAGTATTCCTCTTACGATCCAATTATGTAATTTATCTGATTAACATTCAGAAATTCAAAGGGTAGGGAAGTAGCAACCACAACACATATCAATGGCTCATAAACTACAACCACACAAAAGAGAGATGGACCACAAAATGGGCCTAGCTGATTAAAGAAAGAAATGATCTTTCTTGATTAACCTAATAGAGAGCTATTATAATGTCTATTCTGTTTGTTTATCACCCTATCACTGTCTTTAACATAATTACATCAACTTAATGACCCCTTTCAGAAAAGTGCTAAAGCCATTTTCCGTTCTAAATGTTATTATCTTTCCTCCAAATCTTATATATATATATATATGAAGATAAAAAAACAAAGTTAAAGTTTCACATCATAATTTTTTTGTCTATACCTCTCTTCATGTATGTTAAGTGAAGCATTATCAAAATTAATGAATATTGAAAAAAGAGAGAGATATAGACATAAAATATATATGACATGATGTTATATTTCAACAAAACAGGATAAATTCCTAATTATTATTACCAAATAAAAAAAAAAGGAAACAAGATAATCAACAAGTGTCCACGTGGGGAACCAAAAATGAGAAAGCTTCTTTACATGATTTTCAGCTCCACTATTTTTCATATATGACAGTCCACTATTAGTGAATCACTAGCTAACAAATTGAATTACAAATCAGACTGCAATTTCCATTAATTTTCAACCCACCACTTGAGAGGTTAACCACAACGAATCACTATAAAAGGAAGAGTTTACCTGAATGAAAAACCAATAACCAATTAACCATCATGGTCATGTCCTTATCTTTGAACAAAACATATTACAATGATAAAAGAATAAAGAAGCTGGTTCATGTCTTCACAGCTTCTTCTCTTCCTCTATAAACAAATTAAGTCTTTTACCCCTCCACAATCCCAAAACAGATAATCTTTTCTCTTCTCTCAGCATCAGCAAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	645	916	2.20E-38
PF13855.9	LRR_8	312	371	4.00E-36
PF13855.9	LRR_8	385	443	4.00E-36
PF13855.9	LRR_8	494	538	4.00E-36
PF07714.20	PK_Tyr_Ser-Thr	644	918	1.40E-33
PF08263.15	LRRNT_2	28	67	6.70E-14

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.12.4:RLK-Pelle_LRR-XI-1

Gene Ontology

GO term	Description	Category
GO:0016020	membrane	Cellular Component
GO:0006952	defense response	Biological Process
GO:0051707	response to other organism	Biological Process
GO:0071944	cell periphery	Cellular Component
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR003591	Leucine-rich repeat, typical subtype
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0A1S2XMB8	_

SwissProt

SwissProt term	Description
RGI4_ARATH	Leucine-rich repeat receptor-like serine/threonine-protein kinase RGI4

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G56040	Leucine-rich receptor-like protein kinase family protein
Medicago sativa L.	MsG0580030006.01.T01	_
Oryza sativa L.	LOC_Os08g38560.1	receptor-like protein kinase 2 precursor, putative, expressed
Cucumis sativus L.	Csa005337	_
Glycyrrhiza uralensis Fisch.	Glyur001571s00028315.1	_
Codonopsis lanceolata	Cl_chr04_20550T	_
Arachis hypogaea L.	AH01G03310.1	probable LRR receptor-like serine/threonine-protein kinase At4g26540 like

Expression pattern