Gene detail

Detail information of Am04G029500.1 Annotation

Gene ID	Annotation
Am04G029500.1	Outward rectifying potassium channel protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G029500.1	mRNA	Chr04	177294996	177297798	+

Sequences

CDS:

>Am04G029500.1
ATGGCCAGCCATGATGCAAAAGAGCCCTTACTATTTAGATCACAGGAGGCTGCAGCTCAAAAGGGAAAACAACAGTTAAACAAAAGAAGGTTCCTCCATTCTAAAAGTGCTCCTTACGCAGATTGTGTCCCTCGCGAAACAGATGGCAATGAATCAATTCCCCGTTCTGTATCAATATTTGGGAATTTGAATCCAAACATTAAAAATGTGTCTATGTGCCTTGCTGTCTATTTAGGTGTAGGTGCTCTATTTTTCTACCTTCTCAGGAACCAGATCAAAGGACTGAAAACCAACAGATTCCTTGATGCCATATACTTTACGATGGTGACAATGACTACTGTTGGATACGGAGACCTTGTACCGAATAGCGACCTTACAAAACTACTCGCGTGTGCTTTTGTTTTCTCTGGAATGGCAGTGGTTGGACTAATCCTAAGCAAAGGAGCAGACTACTTGGTTGAGAAACAAGAAGTTTTGCTAGTTAAAGCCATGCACATTAACCAAAAAGTTGGTACAACTCAAATTTTAAAGGAGGTTGAGGTCAATAAAACAAGATACAAATTGATTCTGGTCTTTTTCCTTCTTTTGATTCTCATTATTGTGGGGACAATCGTCTTAGTCACTGTTGAGAAATTGAATACTATTGATGCCTTCTACTGTGTTTGTTCTACAATTACAACCCTTGGTTATGGGGATAAAAGTTTCTCAACTCAAGGAGGAAGAATATTCGCCGTGTTTTGGATACTGACCGGCACTATTTGTTTAGCTCAGTTTTTCCTCTACATGGCCGAACTCAATACTGAAAGCAGACAAAAAGCACTTGTCCAGTGGGTTCTTAAAAAGAAAATGACCAATTTAGATTTGGAGGTTGCAGATTTTGATGAGGATGGAACTGTTGGGGCTGCTGAATTTGTTATTTATAAGCTGAAAGAAATGGGGAAGATTAGTCAAGAAGATATATCTCTTGTTATGGAGGAGTTTGAAGAGCTTGATGTTGATCAGTCTGGTACACTGTCTGTTTCTGATATAACAATTGCTCAGTCATCTTAA

Protein:

Promoter(3k):

>AM04G029500.1
TGGTTATGTACCTGCTGGTGCATGGTAAGAAACTAAGAATCAAGTGCCTTGGACTGCAAGGAAAGGATTCCTATGAAGCTGCTAAGGGGGCTGAGGATGAGTTTTGTTCCGTTGGTGAAGGGTGATGACGTGTATATCATAAGATAAAATAAGATAAGATAAGAAAAGAAAAGAAAAGAAAAGAAGAGAAGACAAGACAAGACAGCATCTTCAATTCAATTTTTTTACATTTACAAGTTAGTTTTATGGTCTATATTCATGGAGTATTGAGAGGTTTTTTGGTCTTATAAGGAGTTGAACTATTGTTTAAGGGGTTTAGGTATCTAGTATTACATTACAGATGAAATATGGTGTTACATTTTTGAAATTTAAATGAAGCTAAATCGTTCATTCTTCTTGTTTCCTTGATTATATGATATATGCTCCTTTTATTTATTTGTTATATCTTCTTTTAAACATAGTCTGTGATCTGTAACAACTAGAGAAACAACACTTAAATCTTCTTGAAGGCTGAAACATTTCAGGTTGAAGAATTAGCTGATACACATGTTTTACGTGACTTTTTTTTTTGACAGAAATGTTTTACATGACTTTTGTTTATATATGAAACGTTTAAAAAACAACTTAAACTGATGGTTTTTAATCTGTTTAAGTTTCAACTGGTTTTCTTTTTATTATAACTTTAAGTGCTTTTTTCTTATTTATCATTGTATTTTTTGTTTGATCTTTTCATAGTTTGGTTCTTCGAATCAATTATTAAATTTTAGGCAAAAATGCACCAAAGATACTTTAAGTTATTTAATTGAAACGAATTGGAGCTTTCAGTTCTTTTACCACTTAGGTCCTCTAAATTACACCATTAGCCATTTTTTCATTTTCAGTTCTAAGCGAGCCCAGTTGGCACGAACAAGCCTGACGTGTTTGTGACAGAGACGATGTGGCTTCCTACGTGGTCATATTCTTCCCTTAATTACTTCATTGTTTCCTCTTCCTCGTGAACCCGAGAAAAAGTCGCAGAATCCTCAAAAACAAAACACTAAATGGCGGGTCTATGAAGTTCTTTTCTCCTCACTCCCCACTCTTCAATTCCATTAATTACCACCCTTTTCTAATATTAGAATATGTACGCATGTTGATCATCTCCTTCCTCCTCCAAAGAATTTTTCTAGAATTTACAAGTACCGAATGAGTTTGGTTCGGTTGGTGGAACAAAAACAGCGGGCCAAACACTAGAAAAAAATTGAATAGATCCGATAAATATTGATTTTTTGCAGTTTTCACTTTGAGTTGGTTCGGTTTTGAACACTCCTAAATCTTGGGCAACAAGAGAGCTTTTGTTTGAAGATAAAGTGTTGGGGAACGCAGAGATGAAGATGAAGTGTTTGTGTTTTTATGGTTGAAGATGAAGATTAGGTTTAAAACATGGGATTTTCATGGTTTAGGGTTTGTGTTTCTGGATTTGAAGTTGAAGATGAAGATGACAAGAGCCCTAACTTAGTAAAGACTAAATTGTAGACTTGGACCAAATTGTTACACGAAAGTAGTCTTAAAAGACTAAATTGTTACAAAACAGAAGACACATAGGCTCTATCACAGTTACATCAGCGCGTTAGTGCCAACTGAGATTGTTTGAGGCAGAAATTGAAAAAATGACTAACGGTGTACACGTTATTATGTAAATTGCATTTTTGTCAAGGAAATAATTTATTCAAATGAGCAAATTCTTAGTAACGCGGAAATGAAGTCATCATAATAATAAATTCTTGTAAAAAAAAGTCATAATAATCAATTATGGATAAAATAGAAACATGGGATCCACTTCCAGTTCCACTTCCACTGAATCAGAGAAGCTTTCCGAAGACTCAGCAACAGCAGAGTTTTACTTGAAAGGTGAAAGCTTTCCTCGCACAACATGAATTACATTCATTATTATTGCTGTTGTTACATGTCTTTCTTTCATAATCTATAAACTTTACTTGATTGGAATTAATACCGCTTATTTTTGTTGTTTAAAGTTGAATTTCCCTTTGCTTATTTGTAATTCATCGCTCCTTACCTGTGAACTTTGGAATTTCTGATGTTGAATTTGTATTGCACTATTGCTATTTCTAGGATTATTATTTTTTATCATTGCTATTTCAGAGGATCTAATGCTCCTTCAAATGATGAATATCCTGTGCTCAACTCAGATCCACCTTATTAATTCAGTTATCCCAAAATTAATGCATCACATCACTAATATCTTGATAAATAAATACTTCTATTTTTATTATCAAACCCCAGTTGTTTGTGCAATTCTGTGTTACTGCTTTTGGGAACTGTTTTTCTTTGGATGGATGCTCATGATTGGGGGAGAATACTTATGAGAATGAAATTTCATTGAGGTGAATGGACAAACTGAAGTCAAAGAGCAAAGGAATTAGAATTTACTTCAAAGCTATGTTGTTTGTGCAATTGAAGCAGTAATACTCATGAATTTCAGACTGAGAACTTAATTAGAATTTGAAATATTATGGAATTGAAGCAGGAAAACTGAGCTGTGTTTTGCAAATTGAGTTTGCTCTATGATTTTTTTGATCTATTATTGTGCTACTTTTAATGCCTATTACTTATTGTGCTTGCAAAGTCATCGTTCTGCTCTACATCTCAAAGAAATATGCAGCTATTATTCCCTTTTCTTCAATTAAAGACATGGAATTGGGATATCCATGTGGCTTATATATGATTATTCAAACAATTTCATTTTGGTTTGCAGTTGAAGTAGAACTTGAATTGACTACCAGTGCCTATTCTACTTTATGTTTGAATATACTTTGTTGTTTTTTCTTTGAAGCCCATCTGATAAATTTGTAATTTGCTCCTTACGATTAATACTTTCATGGCTAGTTTGCGTGTCAATATGCATATATTTTCCATCAATTTTTGACTGACGTGGCTAGTTTCGAGTTTTTTGCATCTGAATCAGGACTGTGCTGATTCCGCCTTTCTAAATTTATCTTC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07885.19	Ion_trans_2	73	153	1.30E-33
PF07885.19	Ion_trans_2	194	265	1.30E-33

Gene family

Gene family	Subfamily
Transporter family	VIC

Gene Ontology

GO term	Description	Category
GO:0022840	leak channel activity	Molecular Function
GO:0022843	voltage-gated monoatomic cation channel activity	Molecular Function
GO:0005886	plasma membrane	Cellular Component
GO:0005509	calcium ion binding	Molecular Function
GO:0016301	kinase activity	Molecular Function

InterPro

InterPro term	Description
IPR003280	Two pore domain potassium channel
IPR013099	Potassium channel domain
IPR011992	EF-hand domain pair
IPR018247	EF-Hand 1, calcium-binding site

trEMBL

trEMBL term	Description
G7K4P7	_

SwissProt

SwissProt term	Description
KCO1_ARATH	Two-pore potassium channel 1

KEGG

KO	Description	Enzyme
K05389	potassium channel subfamily K, other eukaryote

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G55630	Outward rectifying potassium channel protein
Medicago sativa L.	MsG0580029960.01.T01	_
Oryza sativa L.	LOC_Os03g54100.2	potassium channel protein, putative, expressed
Cucumis sativus L.	Csa021984	_
Glycyrrhiza uralensis Fisch.	Glyur000092s00007509.1	_
Codonopsis lanceolata	Cl_C00004_unscaffolded_00450T	_
Arachis hypogaea L.	AH00G03890.1	Two-pore potassium channel 1 like

Expression pattern