Detail information of Am04G029470.1 Annotation
Gene IDAnnotation
Am04G029470.1 _
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am04G029470.1mRNAChr04177225156177227997+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF06246.15Isy112829.80E-90
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0071020post-spliceosomal complexCellular Component
GO:0071014post-mRNA release spliceosomal complexCellular Component
GO:0000389mRNA 3'-splice site recognitionBiological Process
GO:0000974Prp19 complexCellular Component
GO:0071013catalytic step 2 spliceosomeCellular Component

InterPro
InterPro termDescription
IPR037200Pre-mRNA-splicing factor Isy1 superfamily
IPR009360Pre-mRNA-splicing factor Isy1
IPR029012Helix hairpin bin domain superfamily

trEMBL
trEMBL termDescription
A0A2Z6MTK3 _

SwissProt
SwissProt termDescription
ISY1_MOUSEPre-mRNA-splicing factor ISY1 homolog

KEGG
KODescriptionEnzyme
K12870pre-mRNA-splicing factor ISY1

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT3G18790 _
Medicago sativa L.MsG0580029952.01.T01 _
Oryza sativa L.LOC_Os02g39050.1pre-mRNA-splicing factor ISY1, putative, expressed
Cucumis sativus L. _ _
Glycyrrhiza uralensis Fisch.Glyur000022s00002005.1 _
Codonopsis lanceolataCl_chr01_20280T _
Arachis hypogaea L.AH20G34110.1Pre-mRNA-splicing factor ISY1 homolog like

Expression pattern