Gene detail

Detail information of Am04G029310.1 Annotation

Gene ID	Annotation
Am04G029310.1	Mitochondrial transcription termination factor family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G029310.1	mRNA	Chr04	176864494	176867631	+

Sequences

CDS:

>Am04G029310.1
ATGGCTGCTATTTTCTCTCTCTATCCTTACAATCCTATCCTCTATGTTCCAACTGCAACTCCTTCATCTCATTCTCATGGTTCTGCCTATTCGTTCCGGAGACAGAGCAACTTTGCGGTGCTTTCAGCGCATTCCAATCCCAAAATTCTCAAAACTAATAGAAAGTCAGTTTATGGACGAGTCTTCTCGCCTTATGATACCGATGAAGATGAGGAAGAAATGGACGATGAAGACGAAGAAGAAGACGACGATGACGATGATGATGATGATGGGTTCTCTGATGAGGAATTTGCTGAGCCTGCTGACTTAGATGCTAAAGACAAGAAATCTAAGTCAAAGACACTTGCAGTTGCAGGTAGAAAACAAGAAAAGGAGTGGGGTGTGAGATCTCAATCTCATAGCAATGGACAAAGCAATAGAATGGCCAAAAGCCAGAGAGTGGCATCCTTGCGAGAAAATGATAGTGCGAAGTTTGATAAAAATTCAAAGGAGCAAAGATATCCACAGTTGTCAGAAGATATTGTTTTGGATGTGAACTGGTTACCACTTCTTGATTACTTAAGCACCTTTGGAATTAAGGAATCACAATTCCTACAAATGTATGAGAGGCACATGACATCGCTTCAAATTAATGTATGTTCTGCGCGGGAACGGATAGATTACTTGTTAAGTGTTGGAGTTAAACATAGAGATATTAAAAGAATCCTTTTGAGGCAGCCACAAATTATTGAGTATACAGTAGAGAACAATTTGAAGTCTCTTGTTGGTTTTTTGACAGGCTTGGGTATACCAGATTCGAAAATAGGGCAAATTATTGCTGCTGCTCCGTCTCTTTTTTCTTATAGCGTTGTGAATTCGTTAAAACCAACTGTTAGATATTTGATTGAGGAAGTTGGCATCAAGGAAAAAGATTTGGGTAAAGTCATTCAATTGAGTCCCCAAATTCTTGTCCAGCGTATTGATATTTCGTGGAATACTCGATATATGTTTCTTACGAAAGAGTTGGGTGCACCCAGAGAAAGCATTGTGAAGATGGTGACCAAACACCCTCAGCTTCTTCATTATAGCATAGATGATGGATTGCTGCCAAGAATAAATTTCCTAAGGAGCATAGGAATGAAAAATGCAGATATCTTGAAAGTCTTGACTAGCCTTACACAGGTGCTATCACTGTCCTTGGAGGCTAATCTAAAGCCAAAATATTTGTACTTGGTAAATGAACTTCACAATGAAGTGAAATCCTTGACCAAATACCCAATGTACCTTAGCTTATCTTTGGACCAGAGAATTCGTCCTCGTCATAAGTTTTTGGTTTCGCTAAAGAAAGCTCCTAAGGGACCATTTCCTCTTGGATCTCTAGTTCCAACTGATGAATCCTTTTGTCAACAATGGGCTGGAACTACTCTTGATAAATATGTGGCGTTTCGACAGAGATTATTGCTCAAAAAGTTTGCTGAGAAATATGAAAGAAAATTGTGA

Protein:

Promoter(3k):

>AM04G029310.1
ATTGTTTCTCTTTTATGTTATTTTCTGATTTTTGAAGGCATTGCTGGTTTAGTTGTTACATATGGACTTAATTTAAACATCATACAAGCTTGGGTGATATGGAATCTTTGCAACTTGGAGAACAAAATTATATCAGTAGAACGAATACTTCAGTATACTTCCATTCCTAGTGAGCCTCCCCTTGTCGCAGAAGAGGAAAAACGGCCAGATCCTTCTTGGCCCTCATATGGCGAAGTCGACATACGGAACCTTCAGGTAGTTGGACTTATTTTTTTCTTCAAATGTTGTACAAAAGTTAGCTTAGGAATTAGCTTCTGAACAAAAAAGTTGTGCTTTGGATGTACATCTTAGCATAACTTTTGCAAAGTGTTTGTGATACATTTATAATTTTTTGTTGCCTAAATGATGAAGGTCCGATATGCTCCACATCTTCCACTCGTGTTACGTGGGCCTTACATGCACGTTTCATGGAGGAAAGAAAACCGGCATTGTTGGCAGAACAGGAAGTGGTAAAACAACTCTCATACAAGCACTTTTCCGACTTGTCGAACCTACAGCTGGGCAAGTTATCATCGACGGCATCAACAGCTCTTCAATCGGACTCCATGATTTGAGGTTTAGACTAAGCATTATTCGGCAGGATCCAACAATGTTTGAGGGAACTGTGAGAAGTAATCTGGACCCCCTTGAAGAATACACTGATGAACAAATATGGGAGGTGAGTTGGTTTTATTTGTTGGAAAAAATGCACTTTCCACTAGGTTCTATCCAAAAGATTAGACCTGTAATTGTTGTTCAAATACTCACTTACATTCTTTTAAGTAGGCCATTGATAAGTGTCAACTGGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTTGACTCTGCAGGTTTGTCTTCTAATTTTATTGAACACAACGATATAGGACTCCTACTGCTGAACTTGTTACTAATGTGGAAGTCGATGCTGTAGTTAGTGAGAATGGTGAGAATTGGAGCATGGGTCTCAGAGGCAATTGCTTTGCCTTGGTAGAGTGTTGCTTAAGAAAAGCAAGATTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACATCGACAGATAATTTGATTCAACAAACTCTTGCGCGGCATTTCTCAGACTCTACAGTCATTATCATTGCACTTCAAATAACTTCTGTTCTCGACAGCGATATGGTTCTGCTTCTTAATCAAGGTTAGGAAGGGATGTTATTCTTTTATTATTTTGTTGATTGTTTCAATTTCTGATCTAGTTGTATATTGTTGTAGGACTTATTGAGGAGTATGACTCCCCAACAAAATTGCTAGAGGATAAGTCATCATCTTTTGCTCAGCTTGTTGCTGAGTATACCACTAGATCCAATTCCAGATTTTAGAAATCTGTTGATTGGTGATTGAAATCTTACTGAATTAAGAGTTTCTTGATGGCGACGAAAATCTGGCGGGATACTAGCAGTATCTTATCAATGGTGTTTATAATTCTTGTCATTAAGTTAAGCATGTTTGATAGAAAAATGTAATTTATCGAATAAGGCTTTTGACGACATATATCAGTTTATCAGCTTCTTAGAAAACGCCCAAAATTATACTAATTTTGCTGGCATATATTCTTCTCACATTGAGTGGTTTAAAATTTTTCATCTTAACTAATTGATTATCTGTGAGGCCGTTCTGATTTGATCTTATGCACATAAAGGTTACAAAAAACTAGTAAGAATCCTTAACAGAGGAATTATCTGGCATATAGCTTTATTATATGTTGTTTACAATTGTGCTTGTGCAAGACATTGTTTCCAATTACCCAAACATAGAATCTGTGCAAAAATACAGTTGTAGATCATTGAAGTATAGTTGTACAATGTAGTGTACGATATTAACCAGAGAAGAATCTTTTCCAAGACTGCCATGGAAGAAATCCCCCTGAAACATTTAGCATTTGAAGGATTGTAAGGTAATCACAAATAACATGCCTTATAAAATATAGAAACAATTCAACAATGCAATAATTAATCATACCACATTGTGGGCAACGGAAATATTTCTTTTCCCTAAAAACAAGTCCTGACCCTCCACACTCCTCACATTTTTTTTGAGCCATCTGTAATAAGAATATGAATCAAAAGAACCAAATGAGAATATTTGTATTGGTATAAACCGGGTATCCTCTGCGTGCAACTACAGAGACTAATCTCTCGAGCCGGGTAGGACCACAATGAGTGGCAAAACTCTCCCTCAAGAAATGACAATAGCATAGCTCAAAGTTTATTCAGTTAAAATATATAGTGACTTACAATTCTCTTGCTAAATTCAATTCCAGCCACCACAAAAGGTGTAACCCCAGCTACAAAATCCAACACACAAAAAATCAAAACCCAAATAACTAAAACAACACAACAAACCCTTCAATTCATGTGATGCAATACTATTTATTACCTATAGTTCCAACCACAATTTGCCATGTGAGTTCCACTGGAGCTGGATCAAGTAGTACTGTAGTTACATCACTCACTGGAACTGCAGACACCCTTGTTCTTCTACTTCTTGTTGTTGATGTTGTTCTTGTTTTCTTAAACCCAAAATCACAAGTTTTTCTCACAGTTATTAAGGGACAATTCTGTGTAACTATGTTCTTAGTTAAGGAAGGCAAAGAACAACAAACTACTGCCTCCATGATAACTAATTAACTCAACAATTTGGTTCACCTTAGATCACATTCACAGTACCCAACTCAACCGTTATAAACAAGCCACGTATGCTTTTTTTCACACCACACACCCATATTATTTTTTATTTATTTTTTGACATTTATTTAATATTATTTTATTATTATATAAACGACGCCGTTGGAATTGGGGGTTATAAAAAAGTCAAAAAGTCAAAACAGAGAGAAGGAGATAAACCTCTCTGGTTCTATCTAACAGTACATAGATTCTTTTTTGGATTAGATTAGGGTTTTGGAGTATATTCTGTTGTGTTTCGAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02536.17	mTERF	166	440	4.90E-44

Gene family

Gene family	Subfamily
Transcription Factors Family	mTERF

Gene Ontology

GO term	Description	Category
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:1904821	chloroplast disassembly	Biological Process
GO:0010343	singlet oxygen-mediated programmed cell death	Biological Process
GO:0009651	response to salt stress	Biological Process
GO:0032501	multicellular organismal process	Biological Process

InterPro

InterPro term	Description
IPR003690	Transcription termination factor, mitochondrial/chloroplastic
IPR038538	MTERF superfamily, mitochondrial/chloroplastic

trEMBL

trEMBL term	Description
A0A1S3DZ10	_

SwissProt

SwissProt term	Description
MTEF9_ARATH	Transcription termination factor MTERF9, chloroplastic

KEGG

KO	Description	Enzyme
K15031	mitochondrial transcription termination factor family protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G55580	Mitochondrial transcription termination factor family protein
Medicago sativa L.	MsG0580029914.01.T01	_
Oryza sativa L.	LOC_Os07g39430.1	mTERF family protein, expressed
Cucumis sativus L.	Csa023444	_
Glycyrrhiza uralensis Fisch.	Glyur000092s00007533.3	_
Codonopsis lanceolata	Cl_chr04_28260T	_
Arachis hypogaea L.	AH17G02380.1	Uncharacterized protein like

Expression pattern