Gene detail

Detail information of Am04G029180.1 Annotation

Gene ID	Annotation
Am04G029180.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G029180.1	mRNA	Chr04	176679675	176683267	-

Sequences

CDS:

>Am04G029180.1
ATGCAGGACACAAAAGATTTTGCAGTGTTTCTAAAGAAGCTGGTTTGTTTTTCTGTCCTTGTTTTCTTTCTAAGGTTCTGTAATGGAGGTGAGTTATCAGAATCTGAATCTTTCTTCAATTTCCTAAGAGCTGTTGATCCCAAAAATGTACTTAACATTACATCATTATCATTACATCCATGTTTGGTCAAGTTGAGTGGTGTAAGATGCAATTCAAATGCTACCAATATTATAGAGATAAACCTTGAAAACTTGAATCTTAGTGGCATATTTGATGCAGATTCCTTATGCAGACTTCAAAAACTGAGAGTGGTTAATTTAGCTAAGAATAACATTAGAGGAACTATTCCAAATTCAATTCTGAAATGTAAAGGTTTGGTGCATCTTAATGTTACCAACAACCAATTGAGTGGTAGGTTACCAAAGGCTTTAACAAGACTCAAATATCATAAGAATTTGGATATATCTAACAATAATTTTTCTGATATCATCCATAGTAAACAAGAACATAGGAATCTATATACTATCACAAATGAGATAGAAACAACACAACCAACTCCAGCTCCTTTAGGCGACAATACCAAGAAACCGGGATATTCGAAAATTGAAATTTGTGTTGGGTTAGTTTTGGGGACTGTATTACTTTTCTCATCATTATACATTGTGTTCAAGAAGTCACCAAAATTTGTAGCAGAGATACAAGGAGGGAAAAACCATTTTGTGTCTCCTATAAAAAAGCTTACTACAACTGAAGTGAAATCAAAAGGAGGAGGTTCAGAACTTGTATTCTTTGTTAAAGATCATGAAAAGTTCACACTAGATGATTTACTTGGGGCTAAAGCTGATTTGAGAAGTGAAAACTTCTGTAGCAGTCTTTACAAGGTGAAACTTGAGAATAATGTACAGTATGCTGTTAAAAGGTTAAAGAATTCGCAGGTATCTTGTGATGAATTTGAAGAAACATTAAGACAGATTAGCAAAGTCAAACATCCAAATATCCTTCCCCTTGTTGGTTACCGGTGTTCTAGTGAAGAAAAACTTATCATATACAAATATCATAGCAATGGAAGTTTGCTTAATCTTTTAAATGATTATATAGCAGGAAGAAAGGAATTTCCATGGAAACTGCGTCTAAATATAGCATGTGGGATAGCAAGAGGTTTGACTTTTATGTATAAGAAGTTGGATGGAGAGGAGGTAATTCCTCATGGGAATCTGAAGCTATCAAATATCCTTCTTGATGAAAAAAATGAACCAATAATAAGTGAACATGGTTTATCAAAATTATTTGATCCAAATAGAGGTTTCCCCTTTGCCTCTCAAGGATATACAGCACCTGAGAAGAGTTTAACAGAAAAAGGTGATGTTTATAGCTTTGGAGTGATTCTACTAGAACTTCTAACAGGTAAAAGCATTGAAGTGAGTAGAATAGATCTTGCGAGATGGGTGAGATCTATGGTTAAAGAGGAATGGACAGGAGAAGTGTTTGATAAGGAAGTTAGAGAAAATGAACTTCAAGGAGCATTTCCTTTGTTGAATATAGCTCTCATGTGTGCTTCACGTTCACAAGAAAATAGACCAACTATGGGAGAGATTTTGGAGACAATAGATGAGGTAATGGATGCACATGAAAAACAACAAGAGCTTTCTGCTGCTAAATGTTGTCCTAATGGTTCCAATCAAGAATTCTATTCAATGGTAGAAAACTAG

Protein:

Promoter(3k):

>AM04G029180.1
CTGATCTATAATATAGACAAGATACATCAATTATTCAATAAACTTAAAACTGCAAAATTTTATGATAATAGGGACTAGAGGGAGTAGTTTTTTGTTATGTTTTTTTTCCTTTCTTTTTGTCTCCGTTACATTGTAACAACGCCAAAAAAATCACTCCTAGTGAGGTATGAAATGAATGCCTATTGAATGACTTTGTGCTCGAATTTGACTTTGTGCTTCTCCTGATCTCTCCTCTTTGTTCTTTGAGTTTAGTATCTCTGGGAATAGGCGATCTTGACATGGCACTGATATTACATATCGTTCTTTGTTTGAAACCTTCAAAATGAGTGTTTTTTTTTTGGGAAAGTGCCAAATCTTGATTATACAATCAAGGCTAAATTATAGTTTTGGTCCCCCTATTTTCAAAAATTCAGACATTTGGTCCCCTTATTTTAAAACTCAGACATTTGGTCCCCCAATTTTAAAAAATCAAATACATTTAGTCCAAAGAGGGACCAAATGTCTTTGATTTTTTAAAATTGGGGGACCAATGTCTTTGATTTTTTAAAATTGAGGGACCAAATGTCTTTGATTATTAGCCATAAAAAACTGAAAATTCCCCTTGGGACTAAATGTCTTTGATTTTTTAAAATTGGGGGACCAAATGTCTGAGTTTTAAAATAGGGGGACCAAATGTCTGAATTTTTGAAAATAGGGGGACCAAAACTATAATTTAGCCTACAATCAATCATCGTATTAAATCCATGAAGAGGCGTTTTGAGAAACTTTGTTTTTGTGTTGCACACATGGTGAGGCGTTTTGAGACCAGTGGTGGACCTACCTTGTAGTGAGGGGGTTCAAAACCCCCTAAAAAAATTGCACTTACCACTCTATATAAATAGCCCAAATCCCTTGAAATTTTAATTTTGAACCCCCTGGAAATTTTAGATTGCACTAGTAGACCAAGTTTTGCACCCATTTGACACTGGCCTTAAAAAATTTGACACCCCTGACCCCGGGGGGGTCCGCCACTGTTTGAGACATGGCTCATATTAGCATTTAAGATTAGGCCCAATTGAGGAAATGAAATGTTTGTATTAGTATATTAAGGTTGAGAGTTACTTTATTGTCCCAAATCTTTGGACAATAAGGACTCAGGGCTCAAATCTAATTGTTTTTATTTTGTCCAACGTGGGATTTATTCAAGTCCAACACGAGGGCCTAGTTGATACTTATATTCTTTTGGGATTTTTTTTGGTACCCCCATCAGATGACAATCTACCCCATCGACCCTGCGAAAACACGTAATTGTCCTTCACAAAATTTAAAAAACCCGAACGTATCCTGATTTCAATTTTTTTTTTTGGAAATCGGATTTATATATCTGTGAGGTAAATCCAATTTCCACTAAAAATTTTAAAAAATTAAAAGCGGATTTATTTGAGATGGGGGGTAGATCCGCTTTTAAAAATAACAAAGTGGATTTACCTTAGGTGGGTAAATCCGATTTTGTTATTTTTAAAAGCGGATTTACCTTATATGGGGGTATATCCGCTTCTAAATAACAAAATCGGATTTACCCCCACTTAAGGTAAGTCCGCTTTGTTAACCTAATTAATAAATAAATAAATTATTTAAAAAATTAGATACGAATTTCGACCGTCTTTTGGTTCTGTTTAGTGTGTAGTTCGTTAACACGTGACGATGTTGTACGTCGAGCGAATAATTTAGGCTAAAAAATCGGTTTTCGGGCAACCTACTCAAATTGTAATGAAACCACAGCCATTAAATCGGAAAAAAAACAAGGATCAAGACTCCACAAGAAGTGACATATTTTAGGACAGCGGAGCTCAAAATCCCAAATTTCATCATTTACTATTTTTTATTAATTTTTTTAATTTTTCATAATTTTCAAAAAATCTAAAAAAATTTGCATAACCTTATTTTGGTTGTGTTAGATTTTTAGTGGTATTTTTATATTTTTTGGATTAGTTTTGACTCTTTAACGGATTTTTAGTAGCATTTTTATAACATTTTTTAAAAATTTAAATAAAAAACAATTATTTTTAATAACAAAATCGGATTTACTTTAGGTGGGCATGTACTCTTTTTATTTTTCCTTCAAAGGTCTATTTTTTCCGCGGTTTTTTATGGGCTTTGGTAACACATTAACATTTAAAATTGGACCCAATTTAGAGGTGCTTTTCGTACATTTCTTAGAAAATAGGTTCGTACCAAATAGCGGTACTGAAGTGCAAATGGACGATAAAGACACAAGGTAGATAAACAACTGTTGGGACATTTCAAAAGGTTTCCAATGGCAAGATGACCGGTGAAAGTATTCAATTTGAATTTCATTGCGTCCAGCAAATCTAGCCTTCTCAGAAGAATCGCTTATATATATATATATATATATATATATATATATATATTTTTTTTTTTTGGTATAAACTGGGTATCCTCTGCGCGCAACTGCAAAGACTAATCCTTTGAGACTAAAACCGCTTATATATTAGTATATTCTTGGTTGATATAATTCAGATTATGTTAGAATATATAATTAAATATTTTTTTGCATGGGTGAAAATGGAATGTCAATGGAAGTTTTTTATTTCCAATGATTGGCTGCTCATATATAAGTACATATGGCATGACAGATGCAAATGCTACTACTAGATAACCAGATATGTGACAACTATATTTACCAAAATATTATTCCAATATGCCAAATATTTTATGCTATAACAAATATAAAAGGGTATATATATATATATATATCCTTCATTCTTATGCTTGACACACGCAATTTTGTTTTATATCACACATTGGGACATAGAAGCACCGATGATAACAAGTATTACAAGATGGGAACAAAAACATCGAACGTAGATGTCTAGAAAAAGACATGTCCTTATCCAATACAATGCAAAAATTATAGTAACAAGCAAGACTAGCATAATTGATTCATTCATTCATTCATAAGGTACTCTTTAACAACACAAATAGAAGCTGAGTACAAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07714.20	PK_Tyr_Ser-Thr	295	535	2.70E-24
PF00069.28	Pkinase	292	534	3.80E-22

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.9.3:RLK-Pelle_LRR-III

Gene Ontology

GO term	Description	Category
GO:0016020	membrane	Cellular Component
GO:0098542	defense response to other organism	Biological Process
GO:0005524	ATP binding	Molecular Function
GO:0000165	MAPK cascade	Biological Process
GO:0004888	transmembrane signaling receptor activity	Molecular Function

InterPro

InterPro term	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR032675	Leucine-rich repeat domain superfamily

trEMBL

trEMBL term	Description
A0A371FD27	_

SwissProt

SwissProt term	Description
Y5332_ARATH	Probable inactive receptor kinase At5g53320

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G53320	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0580029900.01.T01	_
Oryza sativa L.	LOC_Os03g21510.1	inactive receptor kinase At2g26730 precursor, putative, expressed
Cucumis sativus L.	Csa021096	_
Glycyrrhiza uralensis Fisch.	Glyur000092s00007541.1	_
Codonopsis lanceolata	Cl_chr04_28940T	_
Arachis hypogaea L.	AH17G02300.1	Leucine-rich repeat receptor-like protein kinase PXC1 like

Expression pattern