| Gene ID | Annotation |
|---|---|
| Am04G028960.1 | Small nuclear ribonucleoprotein family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G028960.1 | mRNA | Chr04 | 175878665 | 175882410 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01423.25 | LSM | 9 | 84 | 2.10E-18 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0005686 | U2 snRNP | Cellular Component |
| GO:0005685 | U1 snRNP | Cellular Component |
| GO:0071013 | catalytic step 2 spliceosome | Cellular Component |
| GO:0046540 | U4/U6 x U5 tri-snRNP complex | Cellular Component |
| GO:0005737 | cytoplasm | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR017131 | Small ribonucleoprotein associated, SmB/SmN |
| IPR001163 | Sm domain, eukaryotic/archaea-type |
| IPR047575 | Sm domain |
| IPR010920 | LSM domain superfamily |
| trEMBL term | Description |
|---|---|
| A0A9D5B7A1 | _ |
| SwissProt term | Description |
|---|---|
| RSMB_DROME | Small nuclear ribonucleoprotein-associated protein B |
| KO | Description | Enzyme |
|---|---|---|
| K11086 | small nuclear ribonucleoprotein B and B' |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G44500 | Small nuclear ribonucleoprotein family protein |
| Medicago sativa L. | MsG0580029754.01.T01 | _ |
| Oryza sativa L. | LOC_Os07g07220.1 | LSM domain containing protein, expressed |
| Cucumis sativus L. | Csa000767 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000145s00010131.1 | _ |
| Codonopsis lanceolata | Cl_chr01_52150T | _ |
| Arachis hypogaea L. | AH17G02630.1 | Small nuclear ribonucleoprotein-associated protein B' like |