Gene detail

Detail information of Am04G027920.1 Annotation

Gene ID	Annotation
Am04G027920.1	sucrose phosphate synthase 3F

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G027920.1	mRNA	Chr04	173849169	173854918	+

Sequences

CDS:

>Am04G027920.1
ATGGCTGGGAATGAGTGGATCAATGGGTACCTTGAGGCAATACTATCCACCGGAGCTGCTACTGCCACCGTTGATGAACAGCAAAGGGCAATGGCAACTCCAAGAGAAACTGATCTTCATTTCAATCCAACAAAGTACTTTGTAGAAGAAGTGGTAACAAGTGTTGATGAGTCTGATCTTCATCGTACTTGGCTTAAGGTTGTTGCAACTCGTAACACGAAAGAGCGTAGCTCAAGGCTTGAGAACATGTGCTGGCGTATTTGGCATCTTGCTCGTAAGAAGAAACAGGTGGAAGGTGAAGAGCTTCAGAGATTGGCAAAGAGAAGATGGGAAATAGAACAAGGAAGAAGGGATGCAACAGAGGATTTGTCTGAAGAGTTATCAGAAGGTGAAAAAGGAGATGGTATTGCTGAGATTATACAAATTGAAACTCCAAAGAAAAAACTTCCTAGACCGATGTCTAGCTTGGAATTGTGGTCTGATGACAAAAAGGAAAAGAAACTTTATATTATCCTCTTAAGTTTGCATGGATTGGTGAGAGGAGAAAACATGGAGCTTGGTAGAGATTCTGATACTGGTGGACAGATTAAATATGTGGTAGAACTTGCTCGGGCACTTGCGAAAATGCCAGGAGTGTATAGAGTAGATCTCTTCACACGCCAAATTTCATCTCCTGAAGTTGATTGGAGCTATGGAGAACCTACAGAAATGCTAACTACAGGCCAAGATGATGATGATGATGATGATGATGATAATGATAATGATGACAGCACTGGGGAGAGCAGAGGTGCATATATCATAAGAATACCGTTTGGTCCGCGCGATAAATATCTCGAGAAAGAACTTCTTTGGCCACATATTCAAGAATTTGTGGATGGAGCCTTAGCTCACATTCTCAACATGTCAAAAGTATTAGGTGAACAAGTTGGAAAGGGTCATCCTGTATGGCCATATGTGATTCATGGACACTATGCTGATGCTGGAGATAGTGCTGCTCTTCTTTCAGGTGCTTTGAATGTACCAATGGTTCTCACAGGTCATTCACTTGGAAGAAGCAAACTTGAACAGCTTCTTAAACAAGGGCGCCAATCAAGGGAGGATATCAATTCAACATATAAGATAATGAGGAGGATTGAAGCTGAAGAACTTTCATTAGATGCTGCAGAACTTGTTATTACTAGTACTAGACAAGAAATCGATGAGCAATGGGGACTTTATGATGGTTTTGATGTCAAGCTTGAGAAAGTTTTGCGCGCTCGTGATAGACGCGGTGTCAACTGTCACGGTCGATACATGCCAAGGATGGCGGTTATACCTCCTGGTATGGATTTTAGCAATGTTGTGGCACAAGCAGATGGCCCTGAAGTAGATGGAGATCTCTCACAGCTTACTGCTGATGGGTCTTCAAAAGCTATACCTGCAATTTGGTCAGATGTGATGCGTTTCTTCACAAATCCTCACAAGCCTATGATCTTAGCCTTATCAAGGCCAGATCCAAAGAAAAACATAACCACTTTGTTAAAAGCTTTTGGAGAATGCCGTTCCCTAAGAGAACTAGCTAATCTTACGCTTATAATGGGAAATAGAGATGATATAGAAGAGATGTCTTCTGGGAATGCTAGTGTGCTCACAACTGTGTTGAAATTGATTGATAAGTATGACCTATATGGACATGTGGCATACCCTAAACATCACAGGCAATCTGATGTTCCTGAGATATATAGATTTGCTGCTAAAACAAAGGGGGTTTTCATAAATCCAGCTTTAGTGGAACCTTTTGGTCTTACTTTGATTGAGGCTTCTGCACATGGATTGCCAATGGTGGCCACTAAAAATGGGGGACCAGTTGATATTCATCGGGCCCTCAACAATGGTTTACTTGTGGACCCTCATGATCATCAAGCAATTGCTGATGCATTGCTCAAGTTGTTATCAGAGAAAAACCTCTGGCATGAGTGCAGGAAAAATGGTTGGAAGAACATACACCTTTTCTCGTGGCCTGAACATTGTCGTACTTATTTAACGCGCGTGGCTGCGTGCCGGATGAGGTATCCACAATGGCAAAATGATACACCAGAAGATGATGTAGCTGATGAAGAATCTTTCAATGATTCACTGAAAGATGTGCAGGACATGTCACTTAGGCTCTCAATTGATGGTGATTTAGCAGCAGCAAGTGGTCTTGGTGATGTACAAGACCAAGTAAAACGTCTCCTAAGCAAGATAAGAAAATCAGATTCTGGTTCAAATTCAAATAGTGAGAACATGCTACTTGACAATGTAGCCAACAAATTTCCTTTATTGAGGAGAAGGCGCAGGTTGATTGTTATAGCACTTGATTCCTATGACAACAATGGAGATCCTGATAAGAAGTTAATAGAGATAGTTCAAAGGATATTTAAAGCTGTTCAACTAGACCCTCTAACAGCAAGAGTTTCAGGATTTGCTTTGTCAACTGCTATGACAATCCAAGAAACAGTGCAGTTTTTATCATCAGGAAATATTCAAGTAAATGAGTTTGATGCTTTAATTTGTAGTAGTGGGAGTGAAGTTTACTACCCTGGTGTTAACTCAGAAGAAGGAAAGCTTTTGCCTGATCCAGATTATGAGGTGCATATAGACTATCGTTGGGGTGTTGAAGGTCTAAAGAATACTATTTGTAAACTTATGAATGCTTCTGAAGGTGGAGAAAATTCTGATAAAACTTCTAGTCCTATTGAGGAAGATGTGAAATCAAGCAATGCACATTGCATTGCATACAAATTGAAGGATCTTAGTAAGGCAAAGAAAGTTGATGACTTGAGACAGAAGCTTAGGATGAGAGGTCTACGTTGTCATCCTATGTACTGCAAGGGGTCTTCTAGAATTCATGTTATTCCCCTTCTTGCATCTAGAGCTCAGGCCCTCAGGTATCTGTTTGTTCGTTGGAGATTGAATGTTGCAAACATGTATGTGATCCTTGGAGAAAGTGGGGACACAGATTATGAGGAAATGATATCTGGAACTCACAAGACTATAATAATAAAGGGTGTGGTGTCAAAGGGTTCAGAAGAATTGCTTAGAGGTCCAGGAAGCTACCAAAGAGATGATGTTGTCCCAAATGAGAGTCCTCTTGTTGCATACATCAGTGAAACAACAGAGGAAATAATTGCTAATGCTTTGAAGCAACTTTCAAAATCTGAATGA

Protein:

>Am04G027920.1
MAGNEWINGYLEAILSTGAATATVDEQQRAMATPRETDLHFNPTKYFVEEVVTSVDESDLHRTWLKVVATRNTKERSSRLENMCWRIWHLARKKKQVEGEELQRLAKRRWEIEQGRRDATEDLSEELSEGEKGDGIAEIIQIETPKKKLPRPMSSLELWSDDKKEKKLYIILLSLHGLVRGENMELGRDSDTGGQIKYVVELARALAKMPGVYRVDLFTRQISSPEVDWSYGEPTEMLTTGQDDDDDDDDDNDNDDSTGESRGAYIIRIPFGPRDKYLEKELLWPHIQEFVDGALAHILNMSKVLGEQVGKGHPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRSKLEQLLKQGRQSREDINSTYKIMRRIEAEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARDRRGVNCHGRYMPRMAVIPPGMDFSNVVAQADGPEVDGDLSQLTADGSSKAIPAIWSDVMRFFTNPHKPMILALSRPDPKKNITTLLKAFGECRSLRELANLTLIMGNRDDIEEMSSGNASVLTTVLKLIDKYDLYGHVAYPKHHRQSDVPEIYRFAAKTKGVFINPALVEPFGLTLIEASAHGLPMVATKNGGPVDIHRALNNGLLVDPHDHQAIADALLKLLSEKNLWHECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRYPQWQNDTPEDDVADEESFNDSLKDVQDMSLRLSIDGDLAAASGLGDVQDQVKRLLSKIRKSDSGSNSNSENMLLDNVANKFPLLRRRRRLIVIALDSYDNNGDPDKKLIEIVQRIFKAVQLDPLTARVSGFALSTAMTIQETVQFLSSGNIQVNEFDALICSSGSEVYYPGVNSEEGKLLPDPDYEVHIDYRWGVEGLKNTICKLMNASEGGENSDKTSSPIEEDVKSSNAHCIAYKLKDLSKAKKVDDLRQKLRMRGLRCHPMYCKGSSRIHVIPLLASRAQALRYLFVRWRLNVANMYVILGESGDTDYEEMISGTHKTIIIKGVVSKGSEELLRGPGSYQRDDVVPNESPLVAYISETTEEIIANALKQLSKSE*

Promoter(3k):

>AM04G027920.1
GCCAAAAAACTATAGAGGATGCAAAATCCAAATTGAGCACTACAGAAAGTACTTCCACTAAAATCCAAGCACAGAGAAATTGTTAAACCCCCAACCACTAGAAGCTCTTATGCTTACACCATTCCCGAGGGAAATTTTAACCGTACTAAAACCATAGATGCTAGACATAAAAATTAGAGATGAATACACAAAATTAGACAAGTGAATAGAGTCACAGTCACCCAATAAACAGACTCCCAATCAGAAAACTCAAAGAAAAATTAAAGCTTGAATGCTATCAAAAAATTGTAAATAGATATTTATGTATCAAATCAACAGATATGAAAAATAAAAGAAAGGCTAAAAACAAGTGACATTACATCAAGTAATTCAAGAGCATAAACAAGAGGAGGAAAAATAAATTAAAAATTACACACAATGGAAGAGGGAAAATGGAGACAAAGGGAAAAGGGAAAGATCAGAACCAATTCATACCTGAGGAAAATAACAGACCCTTGCTGAATATGAGAAGACGTGAAGCGAGAGACACACCAACCACAAATCCACCTGGGTTCAAATTCCACTAATTAGGGTTTCAGAGGTTCAAATCACAACCATATGGTTCAAATCGCAGCCAGAGGTTCAATTCGTACCTGGGTTAGGGTTCAAGTCGCAATCAAAGAAGAAGAGTCGATCTAGAGAGAAAAAGAAGGTGCTTGGACCAGCGAAGCTCGGAATCGTTCCAAAGAGAAGCACCTCGAATTTCTGATGAAGAGGTTCTCACCTTGGACTTCTGATGAACAGATTCGCACCACGGAGAAGTTGTTAGGGTTCAAACATAAGGGTTCAAATAGTTAGGGTTTTGGTGACGATGGTGAGTGGTTGGTGGTGAGGGTTTTTTGAGTGCAGTGGTGAGGGTGAGTTGCGAGAGAGTGACTGTTTCGTGAGTGTGAGAGAGATGATAGGGGTGTCAAAACGGGCGGCCCGGCCCGGCCCGGCCCGTTAAGCGACATGCCCGCGAAAAAACGGGCGGCCCGGCCCGGCCCGTTAACCGAACGCGGGCCGAAAATTCATGCCCTGCCCGCGAAGTGGCGGGCTGGCGGGTTGGCGGGCTAGCGGGCTGGCGGGCTGGCCCGTCAATTTACACTGAATTTTAAAAAAAAAAAAAAAAAGCTAAACGGGCGGTTTGGCCCGCCACAGTATTTAGCCCGCGGGCTAGCGGGCGAAGCGGGCCGGGCAACGCGGGCCGGCGGGCATCAATTCCTTAGCCCTGCCCGCCTTATTTTGGTGGGCCAACGGGCCGGCCCGGCGGGCCAAGCCCGTTTTGACATCCCTAGAGATGGAGAGGCTTAGAGGGTGAATGTTTTGCGAGTGTGAGAGAGATGGAAATAGAGCAAGAGAACGCGAAGGGATGGAAAAAAATGGGACCTTTAGCATCGGTTGTTTATACAACCGATGCTAAATGTGTTAGAGATACGCATTTAACATCGGTTGTATAAACAACCGATGCTAAATGTCTGACGCAAGTACTTTTAACATCGGTTGTTTAAACAACCGATGCTAAATGTAGGCGCGAAAATTGAAATCTTCCATTTAATTGCAAAATTGCCACGGCTTCTACATTTAGCACCGGCTGTTCAAACAACCGATGCTAAATGGTGCTTTCTAAAGTTAATTTTCCACTAGTGAATATATGAAGGCTTGCAGGGAGCAGAGCTGTTAGATTTAGAGAGAGAAAATATTCTCTCTAAATCTGACGGTTCTGCTTGCTGCTGCACCATGGAAAGGCGGCAGAGGATACGTCCTCCTTTTTTAGTGGAGCCACATGAACCAATAATAGAGTGAGTATTGGAGAGAGCGTATAAAAGTGAATATTGATAGCATATTTTTTTTGGAATATGATTCATTGAACTATTTTGTAACAAACAAACGCATAGGTGTCAAAAAGTGACACAAATATGACTAATTAGTCCGTCTCCTTTCGCCGACTCTCCCTCAAATAGCAACCTCCTTTGTCTCATGTGTACTCTTAAACTAAAAATTGGTGCAATCAATGACTACTACACTACTTGTATTTCCAAAAAGGCATTTTGGTATAAAAGGCTTGAAAATAGTGAATGCAAAGATAAAGTTTGGTTGATGGTGGTTAGTTAATTGGTTACCACTTGGTGGGATGATGTCTCATTTGCCACATACTTCCACATCAAACACGGACGACTTATGCCTTTATTTTTAACCCATTTTGTTCAACATCATATATAGGCTTGGCTGTGACTGTGAGTGAGTGCTTGACAACACAGTGCTGGCAATTTTTGATGCACTCATGTAATTGAATTTAAAAGGCTATTTGCTAATATGCTATTATATCATTTAGTGAATTTGACAATAGATAACAAATTAACACAAACATATATTAGGAAGCAAGTGGAGTTGCTTTAAGTTGCACATTGTAGGCTGATGCAATGTAAAGAGTAGATATGCCTAACTGTTGTCATCCACAACCACAAATGAAGGCAAATGAATCATATAGTGATATGCGTTTCGAATTAAAGTGTGAGTGGTTAGTCTCATGTCGACTAGGAACGAGCTAAATAAATGATATATATGAGATGTGATTCACATACCTAAATGTCTTAAGATTTTAGGTAGAGATGCAGTGTTCAAGTCTCTTGATAGTCCTCATTATTAGTTCGTTGTTACTCCCGATGCTCCACCAGACTCCAATGAAGGTAGGAAAAGATCAACACTAGACTAGATAACAAAAAACAATCCTTCCCTCCCAAATCCTCAAACAAGACAAAAACCAACGTAATAGTAATATTATTATGTTAACTAACACAAAAGACAACAAAATTGAATGAAAGAATATGCGACCTATCATTCCATTCCATGTGGTTCTCCTTTTAACATGTCCATCTCCTCTCCTTGCTAGCCAAGCCATGTTCATGAATTCCCACGTAACATAACACTCTCTACATTCTAACTAAGACTGAGTACTTGTGTTTGAGTGATAACTGATCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00534.23	Glycos_transf_1	485	657	2.80E-27
PF13692.9	Glyco_trans_1_4	489	645	3.30E-15
PF05116.16	S6PP	811	1008	6.40E-14
PF00862.22	Sucrose_synth	170	443	6.80E-11
PF13579.9	Glyco_trans_4_4	193	400	1.20E-07

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT4

Gene Ontology

GO term	Description	Category
GO:0046524	sucrose-phosphate synthase activity	Molecular Function
GO:0005986	sucrose biosynthetic process	Biological Process
GO:0016157	sucrose synthase activity	Molecular Function

InterPro

InterPro term	Description
IPR012819	Sucrose-phosphate synthase, plant
IPR035659	Sucrose-phosphate synthase, C-terminal
IPR000368	Sucrose synthase
IPR006380	Sucrose phosphatase-like domain
IPR001296	Glycosyl transferase, family 1

trEMBL

trEMBL term	Description
A0A9D4Y766	_

SwissProt

SwissProt term	Description
SPSA3_ARATH	Probable sucrose-phosphate synthase 3

KEGG

KO	Description	Enzyme
K00696	sucrose-phosphate synthase	[EC: 2.4.1.14]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G04920	sucrose phosphate synthase 3F
Medicago sativa L.	MsG0080048363.01.T01	_
Oryza sativa L.	LOC_Os01g69030.3	sucrose-phosphate synthase, putative, expressed
Cucumis sativus L.	Csa006199	_
Glycyrrhiza uralensis Fisch.	Glyur000723s00020864.1	_
Codonopsis lanceolata	Cl_chr08_35210T	_
Arachis hypogaea L.	AH14G05960.1	Probable sucrose-phosphate synthase 3 like

Expression pattern