| Gene ID | Annotation |
|---|---|
| Am04G027670.1 | helicase in vascular tissue and tapetum |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G027670.1 | mRNA | Chr04 | 173239845 | 173247913 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF04408.26 | HA2 | 741 | 814 | 1.80E-15 |
| PF00271.34 | Helicase_C | 548 | 676 | 1.80E-14 |
| PF01424.25 | R3H | 28 | 85 | 1.10E-09 |
| PF00270.32 | DEAD | 196 | 354 | 1.40E-09 |
| PF07717.19 | OB_NTP_bind | 901 | 989 | 2.00E-09 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0005886 | plasma membrane | Cellular Component |
| GO:0140098 | catalytic activity, acting on RNA | Molecular Function |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0005524 | ATP binding | Molecular Function |
| GO:0016787 | hydrolase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR036867 | R3H domain superfamily |
| IPR001374 | R3H domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR007502 | Helicase-associated domain |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR011709 | DEAD-box helicase, OB fold |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR036770 | Ankyrin repeat-containing domain superfamily |
| trEMBL term | Description |
|---|---|
| A0A4D6MNS3 | _ |
| SwissProt term | Description |
|---|---|
| HVT1_ARATH | DExH-box ATP-dependent RNA helicase DExH6 |
| KO | Description | Enzyme |
|---|---|---|
| K14442 | ATP-dependent RNA helicase DHX36 | [EC: 5.6.2.6] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G30800 | helicase in vascular tissue and tapetum |
| Medicago sativa L. | MsG0580029660.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g17432.1 | pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed |
| Cucumis sativus L. | Csa017781 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000141s00009807.1 | _ |
| Codonopsis lanceolata | Cl_C02293_unscaffolded_00030T | _ |
| Arachis hypogaea L. | AH17G03480.1 | Uncharacterized protein like |