| Gene ID | Annotation |
|---|---|
| Am04G027490.1 | chromatin remodeling 5 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G027490.1 | mRNA | Chr04 | 172641340 | 172662953 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00176.26 | SNF2-rel_dom | 637 | 906 | 5.20E-68 |
| PF00271.34 | Helicase_C | 935 | 1048 | 1.00E-21 |
| PF00385.27 | Chromo | 528 | 581 | 4.90E-20 |
| PF13907.9 | DUF4208 | 1529 | 1621 | 2.10E-15 |
| PF04851.18 | ResIII | 617 | 784 | 2.20E-09 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Others |
| Epigenetic Regulators | CHR5 |
| Transcription Factors Family | SNF2 |
| GO term | Description | Category |
|---|---|---|
| GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process |
| GO:0005524 | ATP binding | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| GO:0016787 | hydrolase activity | Molecular Function |
| GO:0003677 | DNA binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR000330 | SNF2, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR016197 | Chromo-like domain superfamily |
| IPR025260 | Chromodomain-helicase-DNA-binding protein 1-like, C-terminal domain |
| IPR000953 | Chromo/chromo shadow domain |
| IPR023780 | Chromo domain |
| trEMBL term | Description |
|---|---|
| A0A396HYL6 | _ |
| SwissProt term | Description |
|---|---|
| CHR5_ARATH | Protein CHROMATIN REMODELING 5 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G13370 | chromatin remodeling 5 |
| Medicago sativa L. | MsG0580029639.01.T01 | _ |
| Oryza sativa L. | ChrUn.fgenesh.mRNA.85 | expressed protein |
| Cucumis sativus L. | Csa007794 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000141s00009830.1 | _ |
| Codonopsis lanceolata | Cl_chr06_01590T | _ |
| Arachis hypogaea L. | AH07G04820.1 | Protein CHROMATIN REMODELING 5 like |