| Gene ID | Annotation |
|---|---|
| Am04G027400.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G027400.1 | mRNA | Chr04 | 172397112 | 172400819 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 190 | 237 | 2.80E-167 |
| PF13041.9 | PPR_2 | 259 | 307 | 2.80E-167 |
| PF13041.9 | PPR_2 | 293 | 337 | 2.80E-167 |
| PF13041.9 | PPR_2 | 398 | 446 | 2.80E-167 |
| PF13041.9 | PPR_2 | 434 | 482 | 2.80E-167 |
| PF13041.9 | PPR_2 | 472 | 517 | 2.80E-167 |
| PF13041.9 | PPR_2 | 503 | 552 | 2.80E-167 |
| PF13041.9 | PPR_2 | 540 | 577 | 2.80E-167 |
| PF13041.9 | PPR_2 | 573 | 620 | 2.80E-167 |
| PF13041.9 | PPR_2 | 608 | 649 | 2.80E-167 |
| PF13041.9 | PPR_2 | 643 | 691 | 2.80E-167 |
| PF13041.9 | PPR_2 | 682 | 715 | 2.80E-167 |
| PF12854.10 | PPR_1 | 220 | 252 | 1.10E-151 |
| PF12854.10 | PPR_1 | 254 | 286 | 1.10E-151 |
| PF12854.10 | PPR_1 | 289 | 321 | 1.10E-151 |
| PF12854.10 | PPR_1 | 395 | 427 | 1.10E-151 |
| PF12854.10 | PPR_1 | 429 | 462 | 1.10E-151 |
| PF12854.10 | PPR_1 | 464 | 497 | 1.10E-151 |
| PF12854.10 | PPR_1 | 500 | 531 | 1.10E-151 |
| PF12854.10 | PPR_1 | 535 | 567 | 1.10E-151 |
| PF12854.10 | PPR_1 | 605 | 636 | 1.10E-151 |
| PF12854.10 | PPR_1 | 639 | 672 | 1.10E-151 |
| PF12854.10 | PPR_1 | 674 | 706 | 1.10E-151 |
| PF01535.23 | PPR | 261 | 291 | 3.60E-128 |
| PF01535.23 | PPR | 296 | 325 | 3.60E-128 |
| PF01535.23 | PPR | 401 | 431 | 3.60E-128 |
| PF01535.23 | PPR | 436 | 466 | 3.60E-128 |
| PF01535.23 | PPR | 472 | 497 | 3.60E-128 |
| PF01535.23 | PPR | 506 | 535 | 3.60E-128 |
| PF01535.23 | PPR | 541 | 571 | 3.60E-128 |
| PF01535.23 | PPR | 646 | 676 | 3.60E-128 |
| PF01535.23 | PPR | 681 | 711 | 3.60E-128 |
| PF13812.9 | PPR_3 | 248 | 303 | 7.50E-82 |
| PF13812.9 | PPR_3 | 317 | 376 | 7.50E-82 |
| PF13812.9 | PPR_3 | 388 | 443 | 7.50E-82 |
| PF13812.9 | PPR_3 | 457 | 513 | 7.50E-82 |
| PF13812.9 | PPR_3 | 527 | 585 | 7.50E-82 |
| PF13812.9 | PPR_3 | 598 | 655 | 7.50E-82 |
| PF13812.9 | PPR_3 | 667 | 713 | 7.50E-82 |
| PF17177.7 | PPR_long | 208 | 339 | 6.60E-43 |
| PF17177.7 | PPR_long | 411 | 540 | 6.60E-43 |
| PF17177.7 | PPR_long | 596 | 688 | 6.60E-43 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
| GO term | Description | Category |
|---|---|---|
| GO:0009507 | chloroplast | Cellular Component |
| GO:0031930 | mitochondria-nucleus signaling pathway | Biological Process |
| GO:0140053 | mitochondrial gene expression | Biological Process |
| GO:0005739 | mitochondrion | Cellular Component |
| GO:0004519 | endonuclease activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A1S2XLP5 | _ |
| SwissProt term | Description |
|---|---|
| PP360_ARATH | Pentatricopeptide repeat-containing protein At5g01110 |
| KO | Description | Enzyme |
|---|---|---|
| K17710 | pentatricopeptide repeat domain-containing protein 1 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G01110 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0580029650.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g06910.1 | PPR repeat containing protein, expressed |
| Cucumis sativus L. | Csa006503 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000141s00009842.1 | _ |
| Codonopsis lanceolata | Cl_chr01_60910T | _ |
| Arachis hypogaea L. | AH17G03790.3 | Pentatricopeptide repeat-containing protein At5g01110 like |