Gene detail

Detail information of Am04G026910.1 Annotation

Gene ID	Annotation
Am04G026910.1	chitin elicitor receptor kinase 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G026910.1	mRNA	Chr04	170848484	170852266	-

Sequences

CDS:

>Am04G026910.1
ATGAAGCTGAAAAACAACTTAGTATTGTTCTTTCTATTGCTGGAATGTACCTTCATTATCAAAGTAGAATCCAAATGTATGAAGGGTTGTGATTTAGCTTTAGCTTCCTACCGTGTCACACCTAAGTTTGTTCTCAAAAATATAACTGATTTTTTACATTCAAAGATTCTGTCAAGTTCTGATATTATAATCAGTTACAATAAAGACAAGATATCCAACATTGATAATTTACCAGCCTTTGATAGTATCAACATTCCATTCCCATGTGATTGTATTGAAGGTGAATTTCTTGGTCATGTATTTGAATACTCAGCTTCTGAAGCAGACACTTATGATTTGATTGCTAATACATATTATGCAAGTTTGACCACTGTTGACCTTCTGCAAAAGTTCAATAGCTATGATCCAAATCATATACCTTCTAATGCTAAGGTTAATGTTACTGTTAATTGTTCTTGTGGGAGTAGCTTAGTTTCAAAAGATTATGGCTTGTTTGTTACCTATCCACTTAGTTCTGTGGATACCCTTCAGAGTATTGCTAGCAAAACTAATCTTGATGCAAAGTTGCTACAAAGTTATAATCAAGGTGTCAATTTCAGCAAAGGAAGTGGGATAGTCTTCATTCCAGGAAAAGATCAAAATGGAGATTATGTTCCCTTGTATCATAGAGCAGCAGGTTTAGCTAAGGGTCCAGCTTTTGGCATATCTATAGCAGGAATATGTGGACTATTGTTATTAGTATTCTGCATATATGTTAAATACTTCCAGAAGAAAGAAAGAGAGAAAGATAAACTTCCAGAAACTTCTAAAGCGCTTTCAACTCAAGATGCTTCAGGTAGTGGAGAATATGAAACTTCAGGATCAACAAGTGGTACTGGTACTGCTAGTGCTTCAGGCCTTACAGGCATTATGGTAGCAAAGTCAACAGAGTTTTCATATCAGGAACTAGCTAAGGCTACAAATAACTTCAGCATTGATAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGAACTTAGAGGCGAGAAAACAGCAATTAAGAAGATGGATGTACAAGCTTCAACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACACGTTCATCACTTGAATCTGGTGCGGTTGATTGGATATTGCGTCGAGGGATCACTATTCCTTGTATATGAACACATTGACAATGGAAACTTAGGTCAATATTTGCATGGTAAAGGTACAGAACCATTACCATGGTTTAGCAGAGTGCATATTGCTCTAGATTCAGCAAGAGGCCTTGAATATATTCATGAGCATACTGTGCCTGTGTATATCCATCGTGATGTAAAATCAGCAAATATTTTGATAGACAAAAATTTCAGAGGAAAGGTTGCAGATTTTGGTTTGACCAAACTTATTGAAGTTGGTAACTCAACACTCCACACTCGTCTTGTGGGAACTTTTGGATACATGCCACCAGAATATGCTCAATATGGTGACGTTTCTCCAAAAATAGATGTGTATGCTTTTGGGGTTGTTCTTTTTGAACTAATTTCTGCAAAGAATGCTGTTCTTAAGACAGGTGAATCTGTTGCTGAATCAAAGGGCCTTGTAGCCTTGTTTGAAGAAGCACTTAATCAGAGTGATCCATTAGAAGGTCTTCGCAAACTGGTGGATCCTAGGCTTGGAGATAACTATCCAATTGATTCAGTTCTAAAGATGGCACAACTTGGGAGAGCATGTACAAGAGACAATCCATTACTAAGACCAAGTATGAGATCTATAGTTGTTGCTCTTATGACACTCTCATCAACTGCTGAGGATTGTGATGAAGACTCTTCCTATGAAAATCAAACTCTCATAAATCTACTCTCAGTTAGATGA

Protein:

Promoter(3k):

>AM04G026910.1
GGGTACTTTCATTTTTTCCTTTTTCATGTTTTAAGGAGTTTGTTTTCGTGTACTTTGGGGTTCAAAAGAATTTTAACCGTTCAAATATGCAAAATTTGTTCCTCAATAACCGATTTGTTTAAAGAATATAGTAACTTTGTAATAAAATACGTAAAGTGCAATGCTAAACAGTGTGTTTTGGGGTATTTTGTTGGTCGATTTTTTTTAATTGTTTAAATAGGCAAAGTTTGTTCCTTAGTATCCAGTTTGGTGGAAAAAAACAATTTGATGACAAAATATGTAAAGTGCAATGCTAAGTAGTGTTTTCGGATGCTTTAGTGTTCGCAAAAAAATTCAACTATTCAAATATGCAAAGTTTGTGCCTCAATAACCGGTTTGGTGCAAAATAAATATAATATCCTGACAAAGTACGTAAAGTGTTATGCTAAGCAGTCTGTTTTGGGTACTTTAGTATTTGAAAAAAAAAATTAACCGTTCAAATACTCAAAGTTCATTCCTCAATAACCGATTTGTTGAAACATATAATAATTTTGTGATAAATACGTAAAGTGTGATGCTAAGCAGTGTGTTTTGGGGCACTTTATCGTTCGTAAAAGTTTTAACTATTCAAATACTCAAAATTCATTCCAAATTAATTTCGTGACACAGAGTCGTGCCACTCACCCTTTTAGTGATTCCACTACTTTAAAAAAATCAATTTATTTTTATACTCATTCTCTTTATATTTTTAAGGACCATATTTTTCTGAATCTTTTAAAAAAATAATTTATTTTTAAACTTCTTCTCCTTATCTTTCTGAACCCGAAATATTTATTAAATTCATTTAGTTGGGTCACTACCAATTCATTTATTGAATTCCTTTCTTCTTAGTATCTTTGGATAGCCAATTTCAATTTTATAATCTTTTTATTTAATTTATAGTAATAATTTAATTTTTATTCATAGATATTTGATTATGTAATTTATAAACCAATACCGTTACTATGGATTATGTGTATGGAACAGTTTGTTTGGATTATATCTATACACACTCTATTTTAGTTTTTAAGTTCGCAATTACATTTTTTTATTACACATTTTTTTAATTCATATTTACCTTTAATTTAAACAAGTTTTTTCATGCTGCAATTTAAGAAACAAATTTTACCCAACAACAATTTTATATTAACTAAAGTTTTTACCCCGTACAACGCACGGATCAATTTTAGTATATTGTTTCTTATATTTTTTTTTATAAACTCGGTATCCTCTGCTCGCAACTGCATAGACGAATCCCTCGAGCCGGATAAGATCACAATGAGCGGCAAAACTGTCTCTCAAAAGATTTAACACTGTTGCATGCTCAAGGCTAAATTCGAACTCAAGACCTTAGTTAAGCTGTAATAGACCCTATCATCTCATCCGAGTGGTCTTGGTCTTGGGTATATTAATATTGTTTCTTATATTTTGGATAGGAAGGAATAAAATGAAAAATGCATGGAATTAAGCAAGTGTTATTGTCTAGTGGATTCCTTTTTGATTTTTATGATGGTGAAAGTCAACGAAGAACAGCTGCACAGGCGTGTCTAAGAATATAAAATGCAAAAATGGGTGTTTGTTGGTGTTGTGAGAGGGCACAATACCAAGTTGTTGCACAGCAGCCGACAGGATTGGCATTTCTGATTCAATGTAAGGAATTTTCAATCGCCAAGATTCCCTCGTCCTTTTGCTTGCCATAAAAATTAATCATGTTATACACCAAATATATAGCCTCAATAAAGGAGTTGTTGCCTAAATAAATAAGGGGAAATAGACATTGACTTCCCTTAATTAAACACTTCTCCTCAATTAAACTACTCCATAAAAATAGAGAGAATTGTGTGTCCAGTATCATAATATCTTTCATTACCAAAATTTTGTTGTCTTAATTGTTGTCACTCTAGAATATAGAAAATATATCAAGATATTTGGATGAGATAGTTTGAGTTTTTTTTTCTGGTTTAACTAAGGTTTTGTGAAGCACTTAAATCTTTCCAAGGAGAATTTTGTCGCCAATTGTGGTCCTATCCGACTCAAGAGATTAGTCTCTGTAATTGCGCGTAGATGATACCCGGTTTAGAAAAAAAGAATACATAAAATATGAATTATTTTTTCAATCATACACTTATTATTAGTTCTCAACCTCCAACACATATCATTCTCTCTCTCTCTCTTAACCACCTAACTCCGATAATAAGGGTTTTTAGTTAAAAAAAAGTATGCCCTCCGTTTCAAAACTTTAGTACTTTTAATTTTTTTTTTCCAAAATAATAGTTCGAGTCATAGAGAGAGGAAGTGAGAAACACATTAATCCCCTTAAAAAAACAATAAAAGAAGAAATACATTTTACTTTTATGAATAGAGCTAATAGAAGAGAATATATTAGAAAGTGTAATGCTATCATTCTCTCTTAGGACTCGTTTGGATCAACTTATTTGGACTTATCTAGTGGCATAAGTACTTGTGAGACAGTTTGAGAGAGTTTATGAAAACAACTTATGACATATTCATAAGCCACTTTTAGCTAATTTTCATAAGCTCCCCAAGATAACTTCTGAAAACAGCTTATAACTTAAAAGTAGTTTAATACTATTTTATCCTTTATTCTAGAAACAACTCATGCATAAGCTCTTATATGATAAACGCTTATACCTTAAGTGCTTAATTAAGTTGTTTACTCAAACGGGCCTCGTAGTGATTTGAGCACATTCATTGGCATTTTAAGTAATTGAATTAATGACATGTCAACTCTAGTTATAGCATAACCTTCACTATGTTCCTCCACATCCTCCTCAAAATCGTCAAACATATCCGAACATGCGTGCTTGTTCTCTTCTGATAAGAGCCAAAACGTGTTCATATCAATTTTACATTCACAAACAAAAGTTGAGAGTTAAGTAGAGTCAGAGTCATAGTCACTTTCCACATAAAAATTCATCAGCATATTAATCAGAAGAGAAAGTGTGACATTAGTTTCTTTCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07714.20	PK_Tyr_Ser-Thr	324	535	6.80E-42
PF00069.28	Pkinase	324	589	2.40E-39

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.1.3:RLK-Pelle_LysM
Carbohydrate-Active enzymes Family	CBM50

Gene Ontology

GO term	Description	Category
GO:0009609	response to symbiotic bacterium	Biological Process
GO:0046777	protein autophosphorylation	Biological Process
GO:0009877	nodulation	Biological Process
GO:0106310	protein serine kinase activity	Molecular Function
GO:0005515	protein binding	Molecular Function

InterPro

InterPro term	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR044812	LysM domain receptor kinase CERK1/LYK3-like

trEMBL

trEMBL term	Description
A0A1S2XLF0	_

SwissProt

SwissProt term	Description
LYK3_MEDTR	LysM domain receptor-like kinase 3

KEGG

KO	Description	Enzyme
K13429	chitin elicitor receptor kinase 1

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G21630	chitin elicitor receptor kinase 1
Medicago sativa L.	MsG0580029437.01.T01	_
Oryza sativa L.	LOC_Os08g42580.1	protein kinase domain containing protein, expressed
Cucumis sativus L.	Csa013548	_
Glycyrrhiza uralensis Fisch.	Glyur001567s00029710.1	_
Codonopsis lanceolata	Cl_chr04_19450T	_
Arachis hypogaea L.	AH07G06270.1	Uncharacterized protein like

Expression pattern