Gene detail

Detail information of Am04G025180.1 Annotation

Gene ID	Annotation
Am04G025180.1	Ankyrin repeat family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G025180.1	mRNA	Chr04	165120587	165124497	+

Sequences

CDS:

>Am04G025180.1
ATGGAGAAACTAGTGGAAGTGTGCGAACCAGCAGAGGTTCGGATAGACTTTACATTGAACTGCAAATGCCGAGCCACAATACGTCTCAAGTCTCTAAACCCAACCACACCAATAGCTTTCAAGATCCAAACCTCATCACCAAACAAATTCCTAGTTAACCCACCTAGTGGACTCATTCCTCCTTTATCCTTCGCCACTTTCCAAGTCATCCTCAGACCTCAGTCCCATATCCCCCACTCTTACCCTCGTTCCCCCTCCGACCGTTTCCTCATCAAAACCGCTGAGTTCTTTCCCAACTCGTCCGCTTCCACTCACCCTCATTCTATTAACTCTTGGTTCGCAACTCGTCCCTTCGGTTTCTCTACTCATGATATTAAACTTAAAGTCGCTTTTGTTGGTCGTATTCTCTTACACGACGCTGTTTCTCGTGGTGATTTAGACGCTGTTAGAGGACTGATTAAACGACAGCGTTCTGTTCTCTCGGTTTTGTCTCCCATTGAGTCTGAGTCCCTCCTACGAGTCGCTACTGAGTTGGTTAACCCGGATGACATGGTTCACCTTCTGCTTGAAGCTGGGTTGAGAATTCAGGAGCCTGTTGGATTCGATAACTTCAAACTCCCTGAGGATTTATGCGTGGCACACGGCGACATCGCTCGTGACGAAGAAGGACAGGTGGAAGATGGAGAAGCGATACTAGAGGTTGCGAGGCAAGGAAACACGGGGGAACTAGAGTATTTATTGCGAAGAGGTGCAAGCGTGAATTACCGTGATCAATATGGGTTAACAGCGCTTCATGCTGCAGCTTTTAAAGGGCACAAGGATATAGTGTTGATGCTTAGTGAAGCAGGATTCGATTTGGAATTGGAGGACGAGGAAGGTCATGTGCCCTTGCATATGGCTGTAGAGAGTGGTGATATAGAGACTGTTCGGGTTTTTGTTGATATGGGTGTGAACCTTAATGTTATGAATAAGAGAGGTGTTACGCCTTTGTATATGGCTAGAGTTTGGGGATATGAGGATGTTTGTCAGCTGCTTATTAGTAGGGGAGCATTGTCCAATCTTCCTCTTACTTCAGCTTAA

Protein:

Promoter(3k):

>AM04G025180.1
GGTTCAAATACGCCAAGTTCCATCCTTAATAACCGGCTTACGCAGAAGAAAAATTGATTTTGTGATAAAACGTGTAAAGCGCTACACTTATCAGTGTGTTTTGAGGTACTTTAGTGTTTGGAAAAATTCGGCAAACCCGCACGTGCTTCAGAAGACTATCACAATTTCTCAATAGAAAAGTTGTTAAATCAATAGGGAAATAATTATAAAGTTGAATTTAAAATAATCGAGAGATTCCAAATAGTAATTTTATTTTTTTCTAAAAAAAACTTTATTTTTGTTTTAATTTAAACTGAAATTGCATAAGCGATCATTTTATTTCTATTTTAAAATTAAAACTCGATATATGTCACTAATATTATTTCATCACATAATTTTATCTGAGTTAGATTTGCTTTTTTAGTTTTTTTACATAAAATTCTTCAATAATACACTGTATATCAAATAGTTTAAGTACCTAACAAATTAAAATTGAAATATACATAATATTATCTAATTTTTCATAAAAATAGGAAAATGCTTAGTATGACGAAGGATATTTGAACTAAAACGCACGAAAGAAGCTTACACCGTTTGATTCCTTTCTGTTTCCTCTTAATCCTTTTCTCTCTTTTATCTTATATATATGCTAGCCGTTGATTTATTGTTCTTTCAAATTCTTGCTGACATCTTTCGTGAGATATAGCAGTTTTCATAAGAATATCACGTGCATTGCACGAGTAAGATCTAGTGGTAAGTTAAACATGAATAATACCCACCCTGTGATGTGACAAAGATTACAAACTCTATCTACTCAAAACTTCAAAGGAAAGGAGTGAAGGACCTTCATCACATTTTTTATCCTCTAGAGATAAGAGTATCCACCTCCACCCTGATTCCTGTCTTCTTTCTTCTATTCAGACTCTTGTTTCTGCAAATGTACCCTAAATCCCCAAATCCCTAAACCCTCAAATCGTGTGCTCTGTTCTCCCCACAATCGTTTTGTTACTACTCAATCCACATAATCGATTTGATTCTCTGTTCAATCTTTCCTTTCAGTGGCAATCGACGAACACGAGACAACCCTTAAGCGCGCATAGTTCATTTTCAACCCTTGTGCAAGCTCAGGTATTCGTTCATTTTGCTGCAATCTTCGATTTTCCTCTTCATTTTCTGCAAGCTAATTCGATTTTCCTTTTCGTTTCTGCAACCCCTGTAGGTTGATTTGCTAGTTGTAGCTTTTTGCTTGTTAGTAGCTTAGGATTCTATGTCGCCATATATTGTGGCTTCCATTTCTTGCGCATGTCTGTTTAAGGAAAGTTTTCAGCTTCAGCTTTGTTTCTGCAATTGTTTGTTTCACGTTGAGGTGCTGGAAATGAGGGTTTGAAAGGTTGGAGTGAAGGTGGAGGTGGTTAGAAGGAGCAACTTGTTTGTGTTGGAAGTATATTTTTTTTATAGTTAAACGATTTTTCACACTTTCCCTCGCTTGACATTGAACTTTTTAAGGGGCATATGATGAATCTCAATTTGACAAATGGGTAATTTGCGTCTGAGCTAATCATTGATGCTGTCACCTTGGAGACCTGATGTCCATAGCCTTATTTCATTGTATCATCGTTTTCTTAATGTTTTTTCTCTCTCAAGAATTATAATTTTTTATGTTTTGTTGATTTCTTTTACTCACAAATATGTTAATTCATAAAATAATCTAAATATTAAGTCATGAAATGAAGAATTGGTGTTCTAATCATCATATTATTCATAACAAGTAATAAAATTAGGTCTGAATAAGTCGATGTTACAAGACATTCAAATACAGAACTATCAATGTTCATTTCCTATAAGAACATTGATATTTCCCAACTTAATCATAGATTTAGCAAATGATGTAAAGAAAAGTTTTTCATTTGATGCATAAGCCCAAGCATACTCCCTATTCGTTTCGTTTAAGTCCTGTCTGATCAAAACATTATCAGATCCTAACAATCCCTTTCCCTCAAGAATGTTTATGAAATAGTTATTATCAAACCTTTTTGGTGTTTGAAAATCAAGGGGCGCAAATTCATTGTCCCTTCTTGTAACAGGGCATATAGACCTTAGGATTCTTCTGAAAGTCGTGTATCGTTTGTAGTGATCATAGCCATAGTAATATTCTTGTTTTGCTTCATAGATCCTCTGCCTAAAGCTTAGGCATCTTGCCCTTCCTATAGTCTGGCTACCTGTTTTTCTTCATATAATCATATAGTTTTTCATCAAATACTAAATCAATTTCTAGGAATAGATAATGAAAATATACCTGATAGAACCACCAAGTCTTTGATGTCGAGACCCTGTTTAAAATTATTGATTAGAGTCTCTAAAAATGAATTTGGAGCAGGGATGAATAGGTTACCACCACTGAAACTTTATTTCAGAGAGTCTTTCCTCCCCATCAAGACATCCCAGCCTGGTCCTCCTCTCTTCAAAACAAACATTTTGGGTAATTTGGTTCTGAATTTTAATATAGCAAATCATTTTGTTACCATCTTCAACGGTTTGTACTTATAGCCTTTAGTTGTTATTCTATGTTACTCTTTTATTTGATTGCAAGTTTGCCTTTGGGTATTTTAAATGGGAAGCAATGTGATTTTCTTTGTTGTCATAAGAATGCTGATTCTGATTGCTTTTTGAAATATGGGTTTTAGGTCGCTAAATTTATGAGATTATGAGTGCATCTTCTAGGAACTATCGAAGTTGTGCTAGCTAAGCAAATTGCTTCAAAAAGATGCATTATTGCTACAGCAGTTCCGTTTAAATCTGCTAATCAAGTTGTTTCTCAGTTTGGAAGAACTGTTGAAGTATATCAATCTTGCTTACTGAAACTTTCCTTATCGTTGATCTTCACTTGCAATTTCTGTTATGCAATATGTGGTGAAGATTGAAAAACCATTGAACTAAAGCAATCTTTAAACTATCATTTTAATTTTTAACTTGTGGTTTCTTTGTCACGGCATGAAACCATACAGAAAACAGTGTTTGTAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF12796.10	Ank_2	229	290	2.70E-22
PF12796.10	Ank_2	292	350	2.70E-22
PF13637.9	Ank_4	232	279	9.30E-21
PF13637.9	Ank_4	296	346	9.30E-21
PF13857.9	Ank_5	246	300	1.80E-14
PF00635.29	Motile_Sperm	24	99	7.60E-12

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0016301	kinase activity	Molecular Function
GO:0005737	cytoplasm	Cellular Component
GO:0016773	phosphotransferase activity, alcohol group as acceptor	Molecular Function
GO:0005634	nucleus	Cellular Component
GO:0140096	catalytic activity, acting on a protein	Molecular Function

InterPro

InterPro term	Description
IPR008962	PapD-like superfamily
IPR000535	Major sperm protein (MSP) domain
IPR013783	Immunoglobulin-like fold
IPR036770	Ankyrin repeat-containing domain superfamily
IPR002110	Ankyrin repeat

trEMBL

trEMBL term	Description
A0A1S2XNG3	_

SwissProt

SwissProt term	Description
VPY_MEDTR	Protein VAPYRIN

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G03430	Ankyrin repeat family protein
Medicago sativa L.	MsG0880044731.01.T01	_
Oryza sativa L.	LOC_Os01g61330.1	ankyrin homolog precursor, putative, expressed
Cucumis sativus L.	Csa002689	_
Glycyrrhiza uralensis Fisch.	Glyur000023s00004871.1	_
Codonopsis lanceolata	Cl_chr01_57420T	_
Arachis hypogaea L.	AH07G07820.1	Death-associated protein kinase 1 like

Expression pattern