Gene detail

Detail information of Am04G025100.1 Annotation

Gene ID	Annotation
Am04G025100.1	myb domain protein 73

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G025100.1	mRNA	Chr04	164848206	164849283	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM04G025100.1
TACATGGAACAATGGATGTATTCGTTTTGGTTATTCGAGAGATTAATAAAATTTGAGAGAAGAAAAAACGAATAATATAAAACAAACTTTAATTCTGGTTTGTAAGGCTAGATATCCAATACCTTAATAATCTGTCATAATTATTTAGAAGACTGATAAATGTACTGAGCTTTCCAAATCAGCCCAAAATGTTGTTTTTCATGGTGTGATTGTCTACCATATTTGTACTTATCTGTACTCAACCAATGGTAAGCACTGATACAGCGTTTACGTAAGGCTTTTCTATTGAAGAACTATTGTTTATTAATTGATTAATTAATTAGAGAGAAAGCTTTTTATATGAAAAGTTGAGAGACATTTTCTCCTTACGAGATGAGAAAGACATGTTTTTTTAAAAGTTAAAATATCGCTTTCATTAACTAAAAACAGAGTCATTACAAAGCGAAGAGTGATTGACCAATTCAGAAAGATTCTTGATGGAGATTCTAAAGAAAATTTCAATTTTTAAATTCACTCGTGAGATTTCCTAATTTTCTTTTTCCAGGATATTCAACATTTTCCTCTAACAAAATGGTTTGTCTCTTATGAACATCTTCATATTCATCTGAATATTTCTGCATCATACTAGTATAATCTAAATGTTGTAACTTGTAAGTAGAGTCAACCAAATGAGCCCATGGCCGTTCAAACCCGCCTTATTTTATAAGTGAGTCGAACCAGCAAATATGAGCCCAGAATTTTTTTGGCCCAACTCGACCTAGACTGAAAATTTATTGACCCACAATGGACTGGCCCAACCCACGGGCCTGATATTTTTACATATTTTTACAAATTAGCACTTCTACTTTTCAATTTTATAAAATTGACCCGTTTTACTTTCAATTTCAGGCCCGTTTCACTTTTGATTTTCAACTTGTATTTGACAATTCATTTCACTTACTCATTCAGATTTCATATGATTGCATTAAAAATCTAATAAAATTAAAAATGGTGAGAAAAGATGCTTTGACATGACGGTCTTAAAGTGGATCTTATGTTTTTATATTTCTTTTGTTTCGTAATAAGAATATTTTTTGTGATATAAATAACTATTATGTTATTATGTAATGAGATAATCAGAGCAATTTATACTTAAAGAACTATCATTTTTTTATTTAGTTATTAGTTTTGGGATGAGAAACTATATTTATTATGATGAGTTCTTACACATATCTCGTTTAATTATTATATTTTATATGCCAAATCATTCCAAATGCTACTATATATTTCGTGTAAGTTTATTTTTTGCAACAAAACAAGTTTACGTTTACTTTATGCAACATAGTTTAATATGTGTCGAAAATAAAATTCGGCAAGCCCAAATTTTTGGCCCATGGGCCAGTCCATTTGGCCTGCAACTCGGATAGGGCTTGGCCGAGCCAATGAATTAACACACATAAATAACAAGGACTAAAAACAAAATAAATATAATACTCTTTTTTTTATAGGTAAGGTTAGTGGGGGTTCAGGGGAAATGTTATTTTTCGGGGTTTGAACTCAAGACTTCCTTCTTGGACTACTTTGGTGCACTCATTCGGTATCCATTAGCTAACCAACTGAGCTACATACTTGGAATCAGTGTTTTGAAATCCGAACCGGACATTAAACCGGTGAAGCCTCCGGGTCATGGCTCAATCGCTTAAAACCACTTAAACCCGGATAAAACCGCTAAAATAATCAAACCGTTGAAGATGTCGGGTCATGGTTTAACCGGATCAACCGCTCGGTTGGTTCGGTTTTCAAAACACTGCTTGGAATAATAAATATAATACTTGAAAAAGACTATATTTAGGAGGTACGAAATATATATTTAATTATTTTATAAATAAAAATCTGAATCTATGATTTAAACTTTAAAAACTCGTTTAATATTGTCACCAGAAGAAAACTCCTTTAATATCGAGCCAGTATCATATGCATGTCCAACTGCCATGACAATTTCCATTTACAAAAATCAGTATTCCCTCAAAGTTTTTCAGCCAAAAATAGCTAAAAACTACGTTACAATACCATTTAATCAAGTTTTGTATAACTAACCTACTTTTTCACACTTTTTAGGCCATTGACTAAAAACTGTAAAAAAAACACGATTGGTTATTGGCTTAAAAAACTTGATTAATTGGTGTTGTAACGTGGTTTTTAGCTATTTTTTGTTGGAAAAGTTTTGCCGAATATCGTTACTCTACAAAAATAAACCATCTCTTCCTTCGTGTAGTACCATTTACTCATGCAATTCCTTCTCTTCTCCCCACCCACCCCCTAACTACATATCACCACACTTCAATAACTGATAGCCGTTACAACTTCATCTTCCTTTTGACTTCCCATCACTCCATCGGTTTGTTAGTTGGTTAGTTCGCTTCCTCAAGATTATGATTATACACTAAACAAACCATACAACAAAACTATTATATAAAGTCTAAAATATATTAATATCATTCTAGATACTGAATACTCCACCCTAACTAACTCCTAATCCTAGTCATCATCACAAAGCAAACTTAACTAATTGGTCAAAAGCTTCTCGGAAAAGACGTTATTTGAGTCAGTTAGATAAATGTGGAAGTTATAACTTCCTCCATTATAAATCATAACCCACTAAAATAATTAAAAAACAATTAAATATATAAACCCACCCATAAACTTCCACCTACCTAAGTCCAAACGAAAAAACTCCCAACTCCTAAATATCAGAAAATTTTTTAAAAGGAATTCATAACAAGAAGAAGAAGAAGTTGAGGAACAGAAACAAACACGTTGTAAACCAGAGATAAAACGGTTTAAAGCTTTTAAGGTTCAATATTCTCATCTCCAACTTTCAATTACAGTTAATTTGTTAAATATTTTATATTCTATATTCAATATAAACAGAAAAAACAAAGCCATTCAATTAACACACATAACATTTTCTTTTCTTTCTGGCATTTTCACAAACAGGTAAAAGAAGAGATTCAATTGGAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	17	63	2.50E-32
PF00249.34	Myb_DNA-binding	71	113	2.50E-32
PF13921.9	Myb_DNA-bind_6	20	78	1.10E-24
PF13921.9	Myb_DNA-bind_6	72	119	1.10E-24

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Molecular Function
GO:0006357	regulation of transcription by RNA polymerase II	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A1S2XMN2	_

SwissProt

SwissProt term	Description
MYB73_ARATH	Transcription factor MYB73

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G37260	myb domain protein 73
Medicago sativa L.	MsG0580029215.01.T01	_
Oryza sativa L.	LOC_Os09g01960.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa018305	_
Glycyrrhiza uralensis Fisch.	Glyur000023s00004890.1	_
Codonopsis lanceolata	Cl_chr03_49600T	_
Arachis hypogaea L.	AH07G08040.1	Transcription factor MYB44 like

Expression pattern