Gene detail

Detail information of Am04G024860.1 Annotation

Gene ID	Annotation
Am04G024860.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G024860.1	mRNA	Chr04	163167806	163173544	+

Sequences

CDS:

>Am04G024860.1
ATGAGGGCGAGGGGAGAGAGTGACATTGGCTGTGAGGGTGGTCATGCATGTGGTGGAGAGATCGCCGGAGACCGTGACGGCGGTGGTGGTGTTTGCCGGCGGTGTGACCTTGCAAGGTGTTGGTTATGGAGGTTCTCTATGGTTGTTGTGGTGTTTGGTGGTTGTTGTAGTGGTTATTGTTGTAGTGGGTTTGAGGTTGTGAAGGGAGAGGAGAAATCGTGGAGTGAAATCAGAGTAGTGGAGACCGTTGCTGCAACCAGAGCAACAGCTGCAGGGTGGTGCCTGAAAAGCATTTTTGTCTCAACCAAAATGGAGAATAAAACAAAGAGCAAAGGGAAAAAGGCTTGTGTTACTTCACAAATCATGTACGTGATGCCAACAACAACTCTTGCTTTGAGTTCAGAGACCGATAAGCTTTCTTTGCTTTCTTTGAAGGAAAAGCTTACCAATGGCGTGCTCGATTCTTTGCCATCATGGAATGAGTCTCTTCATTTTTGTGAATGGGAGGGTGTTACATGCGGTTATCGCCACATGAGAGTCTCTGTTTTGCATTTGGAAAATAAGACTTTGGGTGGCACTCTTGGACCGACTCTGGGAAATTTAACATTTGTCAGAAAGCTCGTACTTTACAACCTCAACTTGTATGGCGGAATTCCAAGACAAGTTGGTCGTTTGAAGCGGTTGCAACATCTTGACTTACAGAGAAACAATCTAGAGGGGGAGATTCCAATGGAGCTCACCAACTGCACAAATCTCAAGGTAATTTACTTGGATTCCAATAAACTTAGTGGAAAAGTTCCCTCCTGGTTTGGATCGATGAGCCAGCTTACCGAGTTTGCTAGTGGAGCCAATTATTTAGTTGGTACAATCCCACCCTCCTTGGGAAATATTTCATCACTGCAGTCCTTAGACCTTGTAGAAAATCAATTGGTAGGAAGCATACCTTATAGTTTGGGTAGTTTGTCAAATTTGAAATGGTTGGATTTGGGTCAAAATAATTTGTCAGGTGTAGTCCCTAATTCTCTTTACAACCTATCAAATATTCGAGTCTTTGCTCTTGCAGTAAACCAGTTATTTGGAAGTCTTCCATCAAATATCCATCTTGTTTTCCCCAATCTTCAAGAATTCCTCATAACACAAAACCACATCACTGGATCTTTCCCTTCTTCCATATCCAATCTCACCGAATTGCAAAAATTTGATATAAGCTCAAATGGTTTTAATGGGCAAATACCTCCTACTTTGGGAAGCCTAAACAAACTTAGTTGGTTTAACATTGGTAATAATAATTTTGGCAGTGAAAGAGCACATGATTTGGATTTTCTTTCCTCACTAACCAATTGTTCTCTGTTGGAAACACTACTTTTAGATGAAAATAGATTTGGTGGTGTATTGCCGAATCTTATAGGAAACTTCTCTATCCATCTCAGTTCGCTTGATATGTCAAGGAATCGAATATATGGAGTGATACCTGAAAGAGTTGGAGAACTAGTCGGTTTACTTGACTTTGATGTGATGGAGAACTTCCTTGAGGGAACAATTCCAAGTTCAATTGGAAAGCTTAAGAATCTAGGGAGATTATCCTTACATGAAAACAAATTATCTGGTAATATTCCTACTGCTATTGGTAATCTTACTATGTTGTCTGAACTTTATCTGTACATCAATAAACTAGAAGGAACCATTCCATCTTCTCTCAGATATTGCACACAGTTGCAGATATTTAGTATTTTTGACAACAACTTGAGTGGTGATATACCCAATCAAACACTTGGCTATCTTGAACGTTTAGTAAATGTTGATTTGAGCAATAACTTCTTGACTGGTTCCCTTCCTTCAGAGTTTGGTAACTTGAAACAACTTTCCTTTTTTTCGCTACAAGAAAACAAGTTGTCTGGTGAAATTCCCAAGGAAGTTGCTGCTTGTTTGGCAATAACAGTGTTTCAGCTGGGTATAAACTATTTCTATGGAGATATACCTTCTTTCTTGGGATCTTTAAAATCCTTGGAAATTTTAGACCTTTCGAAAAATAACTTCTCCGGCACAATCCCCATTGATCTAGAAAATTTGACATTTTTGAATACTTTAAACCTGTCTTTTAACCATCTACGTGGCATGGTTCCCACAGGAGGTGTATTTAGAAAAGTCACTTCAATTTCACTAATTGGAAACAAGGGTCTTTGTGGGGGGATACCTCAATTGATGTTCCCTGCATGCATTGTGCTGCCCTCCAAGAAACACAAGAGATCTCTTCCTCTTAAAAGTAAACTCATCATCATCATCATTGTAATTGTAATTGTCGGGGTTGTGATCTCTTTGGTAGCATTTACTAGCATCTATTTTCTCTTGAGAAAGCCCAAAAAGTTGCCTTCTTCACCATCTCTACAAAATGAGCACTTGAGGGTTACTTATGGAGTGCTACATGAAGCAACCAATGGATTTTCTTCATCAAATTTAGTTCTAAATCTTGAAACACGTGGGGCTGCTAAGAGTTTCACGGCTGAATGCAATGCTTTGGGAAGAATGAAGCATCGAAACCTGCTAAACATCTTGACTTGTTGTTCAAGTGTTGATTATAAAGGTGAGGATTTCAAGGCTATTGTTTTTAAATTCATGTCTAATGGGAGTCTAGAAAACCTGTTGTACGACTGTGAACAATTTGGGTCTCGAAATGTAAATATCTACCTTAGAGAAAGGGTAAACATTGCTCTTGATGTAGCTCATTCATTGGATTATCTTCATAATGATTCTGAGCAAGCTTTAGTTCACTGTGATGTTAAGCCAAGCAATGTTGTTCTTGATGATGACTTTGTTGCCCACTTAGGAGACTTTGGCCTAGCCAGGCTCATTCATGGAGCCTTCGGGAATTCCAGTAAAGATCAAGTCAGTTCCTCCGCAATTAAGGGAACTATCGGATACGTTCCCCCAGAGTATGGAGCAGGCGGCTCTATATCACCAGAAGGAGATATCTACAGCTATGGAATTCTTTTGTTAGAGATGCTCACCAGAAAGAGACCAACAAATAGCATGTTTGGTGAAAATCTAAGTCTACACAAGTTCTGTGAGATGGCTATTCCAGAAGGAATCCTTGATATAGTAGATTCACACTTAGTCACACAATATGTTGAAAATCATATAGGGGTTGTGCAAAGAAACATAAAGGAGTGTCTGATGTCCTTTGTGAGAATTGGAGTTGCATGTTCTGAAGAATTGCCTGCTCATCGAATGTGCATGAAAGATATTATTGTCAAGTTAAATGAAATTAAAAAGAAGCTGCCTAGTTAG

Protein:

>Am04G024860.1
MRARGESDIGCEGGHACGGEIAGDRDGGGGVCRRCDLARCWLWRFSMVVVVFGGCCSGYCCSGFEVVKGEEKSWSEIRVVETVAATRATAAGWCLKSIFVSTKMENKTKSKGKKACVTSQIMYVMPTTTLALSSETDKLSLLSLKEKLTNGVLDSLPSWNESLHFCEWEGVTCGYRHMRVSVLHLENKTLGGTLGPTLGNLTFVRKLVLYNLNLYGGIPRQVGRLKRLQHLDLQRNNLEGEIPMELTNCTNLKVIYLDSNKLSGKVPSWFGSMSQLTEFASGANYLVGTIPPSLGNISSLQSLDLVENQLVGSIPYSLGSLSNLKWLDLGQNNLSGVVPNSLYNLSNIRVFALAVNQLFGSLPSNIHLVFPNLQEFLITQNHITGSFPSSISNLTELQKFDISSNGFNGQIPPTLGSLNKLSWFNIGNNNFGSERAHDLDFLSSLTNCSLLETLLLDENRFGGVLPNLIGNFSIHLSSLDMSRNRIYGVIPERVGELVGLLDFDVMENFLEGTIPSSIGKLKNLGRLSLHENKLSGNIPTAIGNLTMLSELYLYINKLEGTIPSSLRYCTQLQIFSIFDNNLSGDIPNQTLGYLERLVNVDLSNNFLTGSLPSEFGNLKQLSFFSLQENKLSGEIPKEVAACLAITVFQLGINYFYGDIPSFLGSLKSLEILDLSKNNFSGTIPIDLENLTFLNTLNLSFNHLRGMVPTGGVFRKVTSISLIGNKGLCGGIPQLMFPACIVLPSKKHKRSLPLKSKLIIIIIVIVIVGVVISLVAFTSIYFLLRKPKKLPSSPSLQNEHLRVTYGVLHEATNGFSSSNLVLNLETRGAAKSFTAECNALGRMKHRNLLNILTCCSSVDYKGEDFKAIVFKFMSNGSLENLLYDCEQFGSRNVNIYLRERVNIALDVAHSLDYLHNDSEQALVHCDVKPSNVVLDDDFVAHLGDFGLARLIHGAFGNSSKDQVSSSAIKGTIGYVPPEYGAGGSISPEGDIYSYGILLLEMLTRKRPTNSMFGENLSLHKFCEMAIPEGILDIVDSHLVTQYVENHIGVVQRNIKECLMSFVRIGVACSEELPAHRMCMKDIIVKLNEIKKKLPS*

Promoter(3k):

>AM04G024860.1
CGCAAACTTTTCAAAAATAAAAAATACCAACACACAAATATTTTCTACCCAAGAACTACGTAGCTTTGATTTCTCCATCGCACCCGGAGATACGTAGGAGCGGGGGCTCACTCCTGTCAAGCGCAAAAAACTAAAATTTTTATTAAGTCTCCCTTTCCGATTTTTTTTGCAAATAATAAAAAGGGTAAATTAAAATGTTTTCTTTAAACTAATTTTTCTACACATTTAATTAAAAGGTAACCTTTTTAGGATGTTGCGGGGTGCTAGTACCTTCCCCGCACTTAATCGACCCCCGAACCCAAAAACAAAGGTTTTTTTCAATGTTTTCCTAAAAATAAATATTGATGGCGACTCCATTGTTCATTAAAAATAAATATTAATGTTTTCCTAAGGTTGAAACAGAATAATAATATTTACGAGTAAAATAAATAACTATTAAATGTGAAAGGGAAACAAACATAGAAAAAGTTAAAGTTTTAGCACAACTAACCATGTCAGGATTGACTCTCAAAAATGTCCCTAGTGAAGTCTCCAGCTGTAGCGACCGAAAAATCCGGAGGATCTCTCGCGTTCAATGAAGTCGCCAACAATGTTTAATTATAAGGGAAAACATTGAAAAATCCCTTTGAAAATGAAAATGGTCTTGAAAATCAGATTTCGAGTTCGGGAATCGATTATGCGTGGGGAAGGTATTAGCGCCCCACAGCATCCTTTCGAAAAAGGATACCTCTGATTAGTTGTGCAAACTATATTAACTTCAAAAATATTTATTTCCCTTTTATTATGAAATGAGTTGAAAAAGACTTAATAAAAAAATTATTCATTTTGAATTTTTATTGAGAGCCAGCAAAGAAACATTTTTGGAAAAGACTAAAAAAAGGTTTTTTATTATTGCACTTGACAGATGTGGGCCCCCATCTGCTCCTACGTATCTCCGGGTAGAGAATCAAAGGCTACATAGTTCTTGGGTAGAAAATATTTGTGTGTTGGTGTTTTTTATTATTTGAATGTTTTTGAAATTGGAGGGCGATCGTAATGATCAAGCAGATAAATCCAGAGTGGTCACTACTAATAGCCTATTTGAAATGTAAGGTGTTTGCAATACTCAAATGAGTTATACTCAGAGTGACCATTGCAAATAACCGGTTTGGGGTTGAGTGTTTGATTATTTGAAAATGTTTGCTTGAAAACATGATTTTCATAAAAACAGGATGAGATTGTGTGGAAATGAGTTGGATTCATTAGCTTGTAATATGTGTGAGCATGAGTTGGATTCATTGGTTTGACAAGAAAAACAAATACTAACTACAAAAGTGATTAATAAAAATGAAAGAGTACAAAAGTAGTGATTAATAAAAATGAAAGAGAGTATGATAAACACAAAATGGAGTGCAAATAGTATAATAAAGGCACATGAGAGATGATGTGAGGGATAATAAATACATAAATAAAAGGAAGGGGAGTGTTTAAATAAAATAGTATGGATGCAAATAGTAGAACCAAAAATAAAGGCCCAGGTTGTAAAACCAAAGTCCACAACAAGAGAAATGAGAGGGGTGCGAGAACAGATGTGGAAGTGCATTTCTAAGTGAGTTTAGATATATAAAAAAAATAGAAATAATAGTATATAGGCTTAATTGCACTTTTGGTCCCCCTATTATGACCATTTTTCGATTTTGGTCCCTGAACTTTTAATTTGACGATTTTGGTCCCCCTATTTTCCCAATTTGAAAAATTATAGTCCCCCACCCCAATTTTGACTCAGTTTGACTGAGTTATCCTACGTGGCAGCCCACGTGGACTGCCACGTAGGCACACCCCACCCCCACCCCCCCACCCCCACCCCTTCTTCTTCCTCGCTCTCCCTCCCCTCCCCCTTCACTGTTCCCCCTCCCCATCGGTCTCCCTCCCCCTTCACTGTTCCCCCTCCCCATCGGTCTCCCTCCCCCTTCACTGTTCCCCCTCCCCGTCGCTCTCGCTCTCCCTCCCCTCCCCGTCGCTCTCCCTCCCCCTCCTTCGCAGATCTCTCTCTCTCTCTCTCCCTCTCTCTGCGCGAAGATCTCCCCTCCTCCTCTCTCTCTCCCCTCCTCCTCTCTCTCTCTCCTCCTCCTCTCTCTCTCGCGTCGCTCTCGGTGAACCCCGTTGGGTTGGGGTGGGGTGGGATGGGGGTGGGTGGTGGGGTGGGTGGGGTGGGGTGGGATGGGGGTGGGGTGGGTGGTGGGGTGGGTGGGGTGGGGTGGGTCGGTGGTGGGGTGGCGTCGGTGGTGGGGGGTGGGGGTGGGGTCGGTGATGGTGGGGTGGGGGGGGTGGGGTGGGGTGGGGGGGTGGGGGGGTGGGGTGGGGGGGTGTGCCTACGTGGCAGTCCACGTGGGCTGCCACGTAGGATCAGTCAGTCAACTGAGTCAAAATTGGGGTGGGGGACCTTGATTTTTCAAATTGGGAAAATAGGGGGACCAAAATCGTCAAATTAAAAGTTCAGGGACCAAAATCGAAAAATGGTCATAATAGGGGGACCAAAAGTGCAATTAAGCCTAGTATATATAAAAACAAATGGTTTTGTCAAAAAAATAAAAAAATAAAATAAAAACAAATGATAGAAACAGTGGATAGGATGGGGGAGACACGCACGCACACCATCAGGGGAGTGGGTAGTTAAACAAAAATAAAATAAAAACAATAACAAGTTAAAAACAAAACACACACACCCTGTTAAAGGAAAACACACACTACTTGACCTAATTTGAAACACAGTACACACAGAAAAGGGAAAACGGCAGTAGCCGTGAGAGAGAGAGAGTTTTTTTTGTGGGTGAGAATGAAGAAGCAGAACAAAAATGAAAGAGAGAGGAAAAAGAAGAAGGAAGAGACGCTGGAGGGGCCCATGGTTATGGTGCCGGCGACGGCTTCGGTGGGAGGGGTGGTGACCGCGGTGGTGCTGGCGGTGGTGATGTGGGGGTTAATGGTGGTGTGTTGGCGAAGGTGGAGAGAGAGTGACAAGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF13855.9	LRR_8	299	358	1.00E-33
PF00069.28	Pkinase	829	1023	5.70E-28
PF07714.20	PK_Tyr_Ser-Thr	828	1029	5.90E-25
PF12799.10	LRR_4	226	262	2.20E-22
PF08263.15	LRRNT_2	135	173	3.20E-08

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.9.2:RLK-Pelle_LRR-XII-1

Gene Ontology

GO term	Description	Category
GO:0071944	cell periphery	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0006952	defense response	Biological Process
GO:0051707	response to other organism	Biological Process
GO:0038023	signaling receptor activity	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR003591	Leucine-rich repeat, typical subtype
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0A445H2J3	_

SwissProt

SwissProt term	Description
Y3475_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At3g47570

KEGG

KO	Description	Enzyme
K13420	LRR receptor-like serine/threonine-protein kinase FLS2	[EC: 2.7.11.1]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G47570	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0580029183.01.T01	_
Oryza sativa L.	LOC_Os11g07060.5	receptor protein kinase CLAVATA1 precursor, putative, expressed
Cucumis sativus L.	Csa005551	_
Glycyrrhiza uralensis Fisch.	Glyur000023s00004923.1	_
Codonopsis lanceolata	Cl_chr02_30670T	_
Arachis hypogaea L.	AH17G07620.1	Probable LRR receptor-like serine/threonine-protein kinase At3g47570 like

Expression pattern