| Gene ID | Annotation |
|---|---|
| Am04G023860.1 | zinc finger (C3HC4-type RING finger) family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G023860.1 | mRNA | Chr04 | 156665889 | 156667082 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF06547.15 | DUF1117 | 222 | 333 | 3.10E-14 |
| PF13639.9 | zf-RING_2 | 157 | 199 | 3.30E-09 |
| PF14369.9 | zinc_ribbon_9 | 3 | 27 | 4.80E-07 |
| PF12678.10 | zf-rbx1 | 154 | 199 | 1.80E-06 |
| PF13923.9 | zf-C3HC4_2 | 158 | 198 | 7.00E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| GO term | Description | Category |
|---|---|---|
| GO:0061630 | ubiquitin protein ligase activity | Molecular Function |
| GO:0016567 | protein ubiquitination | Biological Process |
| GO:0005737 | cytoplasm | Cellular Component |
| GO:0046872 | metal ion binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR010543 | Domain of unknown function DUF1117 |
| trEMBL term | Description |
|---|---|
| G7KGS3 | _ |
| SwissProt term | Description |
|---|---|
| RDUF1_ARATH | E3 ubiquitin-protein ligase RDUF1 |
| KO | Description | Enzyme |
|---|---|---|
| K11982 | E3 ubiquitin-protein ligase RNF115/126 | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G46620 | zinc finger (C3HC4-type RING finger) family protein |
| Medicago sativa L. | MsG0380015344.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g01940.1 | zinc finger, RING-type, putative, expressed |
| Cucumis sativus L. | Csa011682 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000370s00022658.1 | _ |
| Codonopsis lanceolata | Cl_chr03_41420T | _ |
| Arachis hypogaea L. | AH13G41360.1 | Uncharacterized protein like |