Gene detail

Detail information of Am04G023700.1 Annotation

Gene ID	Annotation
Am04G023700.1	LOB domain-containing protein 33

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G023700.1	mRNA	Chr04	155785803	155786715	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM04G023700.1
GATTCTGGTGAAATAGGCCCACAAATGTCAGAATGAACCAGCTCCAATTTCCTTGAGGCTCTCCATTTGCTTTGCTTAGACATGGCATCCCTATGCTGCTTCCCAACAAGACACTCAGTACATGGCTTCACTGGTTCCTTGAGAGCGGGTATGCCTTCCACCATTCCCTTTTGCTTGAGCAGCATCAGACCATTATGACTGAGATGCCCATATCTTCTATGCCACAAGTCACCCAAGTCATCACTAGAGATCTGCATACAGTTTGCAATAACAGAAGATCCAATGATGGTGAACATCCTGTTATTTGCCATTTTGGATGTAATTATTAGACCCTTTTCCTTATGATAGACTTTACACATATCATCTTCAAAGACAACCTTCAATCCTCCTTGTTGCAATTGACCTATGCTCAACAAGTTGTTCTTCAATTCAGGAATCCAATACACTCCTATAATTACACACACACGCCCTTCAATCTTCAACTTGATGCTACCCTTCCCCCATCACATGTAGCCTCATATTGTTTCCTAATTTCACTGTCTCCCTAAATTCTTCATTTAGATCAAAGAACCAGTCTTTGCAACCACACATGTGGTTGCTACAGCCAGAGTCAAGGAACCAGAGCTCACCATTTGGTCCAATCTTCACTAATTGCTTGCTGTCAGCATATGCCATGAGCAACATTTCCTCTTCTTCATCAAAGCCAGCATAGTTGGCAATCTTTTCTTCAAGATCATGGCACTCATTCCTGTAATGTCCCATTTTGCCACACTTGTAACATTCTATGTGCTCCTTTGACATTTGTCTACCCCTTCCTCTGCCAGAACTTCTTCCTCTACCTCTTCCACCACTTCTACTAGGAGCAGACACTTTCAAGGCCTATTTTTCCTCTTTCTGTTGCCCTTTCATGCGTTGTTCCTCAACCAGCAAGCTACTTTGAAGGTCATCGATGGATAAGCTTTCTGTGTCACGCGATTGAACAATTGAGCAAACCACATAGTTGTAGCTTAGAGTCATTGACCTGAGAATCTTTTCAACCACTACGGTCTCAGTTATCTTTTCATCGTGAGCCTTCATCTTGTTTACAATTGCAAGAGTTCTTGAGAAAAACTCGTTTATTGTCTCGCCTTCCTTCATAGTCAAGATCTCAAATTCTCTTCTCAAGACTTGAAGTTGAGCCTTCTTTACCTTCGAAGATCCCTGGAACTTCTGTTTGAGCGAATCCCAAATGTCCTTTGAAGAATCCATCTTCAAAATTGTCTCCAATATGCTACGATCAAGCGCTTGAAGTAGGTAATTCGTCGCTTTCAGGTCCTTCAACTTCGCTTCGTCTTCAACCTTTCTCAGTTCTTGCGATGCATTCGCCTCCACCGTTGGAACACCGTTTACCACTACTGCCCAGTACTCCTTTGATCGAAGTAAGTTCTCCATTAAGATCGCCCAATGGTCATAGTGGCCATCGAAGCGAGGAATCGCCGGTGAAACGAAGGCGCCGTGTTCCTTTTCTGTCATCGCCGTCGTCGGAATCTGTGGTTCACGGTGGTGTGACAGGTCCCATTCTTGGAGCTCTGATACCAATTGTAACTAATTCTGTTATTAATTGGTAAAAATGCTGTTAGCTTTCATTAATTGAGAAAAGCTATTTATTACAACTGAGTTTAGTCACTTAGTGACTTGGGCCTCCATCAAGGATCTGAAATACAAAAGCATAAATGAATTTGCTTACAGTTCCTTCCTAACCCTCAATTTTTCTCACCTCATCCAAGTGATACCTTTTGTTTTGCTACGACTAGATCCCTACCAAAAAGAATTTATCATTCGTTCCATCTCCTCCCCTAAAGAATTGAGCAAGAGAAAAGTACTCATGCAGTATGTGGGGATAGTTTGTGTTTGTGCTACTGATTTCACCCTAATTTCCTTTCCCACTTTTGAAAGATGTTTCCTTTCCTACTGGTATGTCATGTTTCTTATCTCCTATGTAACTGATGTTTTATATTCATGTTAGTTTGATCTTATTATAATTCATTTATTATAGCAATATAGTTGATTCATGTTGTAACTTATCATGATGATATTCAAAGAATCTAACAAGCAGTGCTTGAAGAGATAACAATGATGGTGATTGATGCAGATAGAGAAAGACAATTTCATCGTTAAACTCGAAAGCCCAAAGTTCTTCATCCACTAGCTCATAGCTCTCCCTTCTCATGCATGTCCATATAAGTCAATGTCAAAAAAAGTTCACAGTTTTGAAGTGACAGAAACCAGAAAGTCATACAATTGTGAATGGCACTGTCTCCCAACTCCTGCAGCTTGCACCTTTCTTAATCTCTTCCTAGTATCACAGAGAAAATAAGTTCAATGCACATGTGACTCTTGCTTATTATGAGCTTGTATTATTAATCTCTTTTTATTGGGTGAAAGAGACAGAAATGAACATCAAAAGAACTACAGGGATAAGCCTAATACACCTAAGAGTCTAAGACCAAAGTTTAAGTGGCCAACAACTAAACCTGAATTATGGTGGGAGTATTATAATATGGTTAATATGTAAACTAGACATAGACTAAGTGGCAGATATAAATGTGATATTAAATTATATCAAGATAAATGGCCGCAATGAGTCATGAACTCTAAGCTAAGAAAAATAGATTAGGTAAAGCATGCATTATAGTTCAAAACTTATAAACTGATTATAGTAAAAACTTTTTCTTATCCCCACCAACAAATGATGATGATGATTGGGTATTCAATAACAGTCCCATGAGAGAAACAACTTTATGAATAAGGCACAAAAGAGGAAATTATTTCCTTAATTGACAATGACAATGTAGGCCACAAAAGAGACCCAAAAGAACATACTCTAAAGTAAAATGAAGTGTGAAAGAGAATATCCTCAGGTGATGGCTATAAAACTTTAGAATTCTCAAACTCTCTTTAGGCATAATTGTACTACAACTACATACATCATTGACAAAACACCCCTAAAAACTTAAGACA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03195.17	LOB	7	103	1.40E-34

Gene family

Gene family	Subfamily
Transcription Factors Family	Others

Gene Ontology

GO term	Description	Category
GO:0009755	hormone-mediated signaling pathway	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0045893	positive regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR004883	Lateral organ boundaries, LOB

trEMBL

trEMBL term	Description
A0AAN9Q4B9	_

SwissProt

SwissProt term	Description
LBD33_ARATH	LOB domain-containing protein 33

KEGG

KO	Description	Enzyme
K13945	LOB domain-containing protein 29

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G06080	LOB domain-containing protein 33
Medicago sativa L.	MsG0580029034.01.T01	_
Oryza sativa L.	LOC_Os03g05510.1	DUF260 domain containing protein, putative, expressed
Cucumis sativus L.	Csa017697	_
Glycyrrhiza uralensis Fisch.	Glyur000169s00018351.1	_
Codonopsis lanceolata	Cl_chr03_41310T	_
Arachis hypogaea L.	AH13G41300.1	LOB domain-containing protein 33 like

Expression pattern