| Gene ID | Annotation |
|---|---|
| Am04G023280.1 | Pentatricopeptide repeat (PPR) superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G023280.1 | mRNA | Chr04 | 152515682 | 152518057 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 285 | 334 | 1.30E-108 |
| PF13041.9 | PPR_2 | 327 | 369 | 1.30E-108 |
| PF13041.9 | PPR_2 | 358 | 404 | 1.30E-108 |
| PF13041.9 | PPR_2 | 390 | 439 | 1.30E-108 |
| PF13041.9 | PPR_2 | 432 | 474 | 1.30E-108 |
| PF13041.9 | PPR_2 | 461 | 509 | 1.30E-108 |
| PF13041.9 | PPR_2 | 499 | 535 | 1.30E-108 |
| PF13041.9 | PPR_2 | 530 | 579 | 1.30E-108 |
| PF12854.10 | PPR_1 | 281 | 314 | 2.40E-107 |
| PF12854.10 | PPR_1 | 318 | 348 | 2.40E-107 |
| PF12854.10 | PPR_1 | 351 | 383 | 2.40E-107 |
| PF12854.10 | PPR_1 | 387 | 419 | 2.40E-107 |
| PF12854.10 | PPR_1 | 422 | 450 | 2.40E-107 |
| PF12854.10 | PPR_1 | 457 | 488 | 2.40E-107 |
| PF12854.10 | PPR_1 | 492 | 524 | 2.40E-107 |
| PF12854.10 | PPR_1 | 527 | 558 | 2.40E-107 |
| PF12854.10 | PPR_1 | 562 | 582 | 2.40E-107 |
| PF01535.23 | PPR | 323 | 353 | 6.80E-80 |
| PF01535.23 | PPR | 393 | 419 | 6.80E-80 |
| PF01535.23 | PPR | 428 | 458 | 6.80E-80 |
| PF01535.23 | PPR | 463 | 492 | 6.80E-80 |
| PF01535.23 | PPR | 499 | 527 | 6.80E-80 |
| PF01535.23 | PPR | 533 | 563 | 6.80E-80 |
| PF13812.9 | PPR_3 | 243 | 297 | 2.30E-50 |
| PF13812.9 | PPR_3 | 344 | 400 | 2.30E-50 |
| PF13812.9 | PPR_3 | 518 | 575 | 2.30E-50 |
| PF17177.7 | PPR_long | 335 | 433 | 1.40E-30 |
| PF17177.7 | PPR_long | 431 | 583 | 1.40E-30 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
| GO term | Description | Category |
|---|---|---|
| GO:0031930 | mitochondria-nucleus signaling pathway | Biological Process |
| GO:0008017 | microtubule binding | Molecular Function |
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0006397 | mRNA processing | Biological Process |
| GO:0007010 | cytoskeleton organization | Biological Process |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A9D4Y803 | _ |
| SwissProt term | Description |
|---|---|
| PPR26_ARATH | Putative pentatricopeptide repeat-containing protein At1g09680 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G09680 | Pentatricopeptide repeat (PPR) superfamily protein |
| Medicago sativa L. | MsG0580028915.01.T01 | _ |
| Oryza sativa L. | LOC_Os04g38930.1 | pentatricopeptide, putative, expressed |
| Cucumis sativus L. | Csa008695 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000147s00013852.1 | _ |
| Codonopsis lanceolata | Cl_chr01_60910T | _ |
| Arachis hypogaea L. | AH17G10040.1 | Putative pentatricopeptide repeat-containing protein At1g09680 like |