Gene detail

Detail information of Am04G021160.1 Annotation

Gene ID	Annotation
Am04G021160.1	ubiquitin activating enzyme 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G021160.1	mRNA	Chr04	134277761	134284883	-

Sequences

CDS:

>Am04G021160.1
ATGCTTCCTAGAAAGAGAGCTTGTGAAGGAGTGGTTGTAGAAGACGAGACTGAAAACAACAACAACAACGCAGGTGTTGGTGCAGCTTCGATTCACAAAAAAACTCGGATCGGCTGCGTTGCTGCTTGCTCAGGTGAATCGACGGTGAACGACAGTGACCGGAGCTTCATTAGCGGCGGCGAAGGTAACAGCAACAGCAACAACAGCGCCGGGAATTCAATTGGAGGATCGTTACCTATGGCTTTGGGGGATTCGAAACCAATGGAAATTGATGAGGATCTACACAGCCGTCAGCTCGCTGTGTATGGCCGTGAGACTATGAGGAGGCTCTTTGCGTCTAATGTCCTTATTTCTGGGATGCAGGGACTTGGTGTTGAGATTGCGAAGAATCTTATTCTTGCTGGTGTCAAATCTGTAACCTTGCATGATGAAGGGAATGTGGAGTTATGGGATTTGTCCAGTAATTTTGTGTTTTCAGAAAATGACCTCGGTAAGAACAGGGCAGTGGCTTCTGTTAGTAAGTTACAGGAACTCAATAATGCAGTGCTTGTGGTAAGTTTGACAACTAAACTGACAAAAGAGCAACTTTCCAATTTCCAGGCTGTTGTTTTTACTGAAGCTAGTCTTGAGAAAGCCGTTGAGTTCAATGATTACTGCCACAGTCATCAGCCTCCTATTGCTTTTATTAAAACTGAAGTTAGAGGCCTTTTTGGTTCCGTGTTTTGTGATTTTGGGCCAGAGTTCACTGTTTTTGATGTTGATGGAGAGGAACCCCATACTGGTATAATTGCATCTGTCAGCAATGACAACCCTGCTCTAGTATCTTGTGTTGATGATGAGAGGCTTGAGTTTCAGGATGGAGACCTTGTTGTCTTCTCAGAAGTTCATGGTATGAAAGAGTTGAATGATGGAAAGCCAAGAAAGATTAAAAATGCTAGAGCATATTCATTTACTCTTGAAGAAGACACAACAAACTATGGTAGTTATGAAAAAGGTGGTATTGTCACACAGGTCAAACAACCAAAGGTTTTGAACTTCAAACCACTCAAGGAAGCACTCAGTGATCCCGGTGATTTTCTTCTAAGCGATTTTTCTAAGTTTGATCGCCCACCTCTACTGCATTTAGCATTCCAGGCTTTAGATAAGTTCATTTCTGAGATAGGTCGCTTCCCTGTTACTGGTTCAGAGGATGATGCACAGAAATTAATTTCTATTGCCAGTAATATTAATGGAAACTTAGGTGATGGACGATTGGAAGATGTAAACCCACAACTTCTACGGCAGTTTTCCTTTGGTGCTAGGGCAGTATTGAACCCTATGGCAGCCATGTTTGGTGGAATTGTAGGACAAGAGGTTATGAAGGCATGCTCTGGGAAGTTTCATCCACTTTTTCAGTTTTTCTACTTCGACTCCATCGAATCACTTCCTACAGAACCATTGGATCCGAATGATTTAAAACCAATAAATAGTCGTTATGATGCCCAGATTTCAGTTTTTGGACAAAAGTTGCAGAAGAAATTAGAGGATGCTAAAGTGTTTGTTGTTGGATCTGGTGCACTAGGATGTGAGTTTTTAAAAAATCTTGCCCTAATGGGAGTTTCTTGTGGAGCTCAAGGGAAGCTGACAGTTACCGATGATGATGTCATAGAAAAGAGTAACTTAAGTAGGCAGTTTCTCTTCCGTGATTGGAATATTGGCCAGGCTAAATCTACAGTTGCCGCTTCAGCTGCTGCATCTATAAACCCTAGTTTCAATATTGAAGCTTTGCAAAATCGTGTTGGCTCAGAAACTGAAAATGTGTTTCATGATACCTTTTGGGAAAACTTGAGTGTCGTTATTAATGCACTAGACAATGTGAATGCAAGACTATATGTTGATCAAAGATGCTTGTATTTCCAGAAGCCACTTCTTGAATCTGGAACCCTTGGAGCGAAATGCAACACCCAGATGGTCATTCCCCACCTAACAGAAAACTACGGTGCTTCAAGAGATCCACCTGAGAAACAAGCACCAATGTGTACTGTGCACTCATTTCCACACAACATTGACCACTGCTTGACATGGGCTCGATCAGAGTTTGAGGGTTTGCTTGAGAAAACTCCGGCTGAAGTAAATGCATATTTATCTAACCCCAGTGAATATACTAAGGCAATGAGGAATGCTGGTGATGCTCAAGCAAGGGATAACTTGGAGCGTGTTCTTGAGTGCTTGGACAAGGAGAAGTGTGGGACTTTCGAAGATTGTATTACTTGGGCTAGGCTAAAGTTTGAAGATTATTTTGCTAACCGAGTGAAGCAGTTAACTTATACTTTTCCTGAAGATGCTGCAACTAGTACTGGAGCTCCTTTTTGGTCTGCACCAAAGCGATTCCCTCGTCCACTGCAGTTCTCCACCTCTGATCCGGGTCATCTTCAGTTTCTGTTGGCAGGTTCTATACTAAGAGCAGAAACATTTGGTATCCCTATCCCTGACTGGGCGAAGAACCCTACAAAGTTGGCTGAAGTTGCTGATAAAATGATAGTACCCGACTTCCAGCCCAAGAAGGACGTGAAAATAGTGACAGATGAGAAGGCCACCAGTCTCTCAGCTGCTTCTGTGGATGATGCAGCTGTTATTGATGATCTAATCCTCAAGTTAGAGAGGTGCCGATCAAATCTGCAACCTGGGTTCAGGATGAAGCCAATCCAGTTTGAGAAGGATGATGATACAAACTACCATATGGACGTGATAGCTGGCCTAGCCAACATGAGGGCACGCAATTACAGCATTCCTGAGGTTGACAAGCTGAAGGCCAAGTTTATTGCGGGACGAATTATTCCAGCAATTGCAACCTCAACTGCTATGGCCACTGGGCTTGTCTGCCTGGAATTATATAAAGTTTTGGCAGGAGGGCACAAGGTTGAGGACTATCGAAACACATTTGCCAACTTAGCACTGCCTCTCTTTTCCATGGCTGAGCCAGTTCCAGCAAAGATCATCAAGCATCAAGATTTGAGTTGGACGGTTTGGGACAGATGGATTATAAAAGACAATCCTACTCTCAGGGAGCTTCTTGAGTGGCTGAGGGCAAAGGGTTTGAATGCTTATAGTATTTCTTGTGGAAGTTGTCTGCTCTATAACAGCATGTTTCCTAGACACAAAGAGCGAATGGACAGGAAAGTTGTTGATTTAGCAAGGGAAGTAGCCAAGATGGACATTCCTGCATATCGTCGTCACTTGGACGTTGTTGTGGCATGTGAGGATGATGATGATAATGACATTGATATTCCTCAAGTATCCATTTATTTCCGTTAG

Protein:

>Am04G021160.1
MLPRKRACEGVVVEDETENNNNNAGVGAASIHKKTRIGCVAACSGESTVNDSDRSFISGGEGNSNSNNSAGNSIGGSLPMALGDSKPMEIDEDLHSRQLAVYGRETMRRLFASNVLISGMQGLGVEIAKNLILAGVKSVTLHDEGNVELWDLSSNFVFSENDLGKNRAVASVSKLQELNNAVLVVSLTTKLTKEQLSNFQAVVFTEASLEKAVEFNDYCHSHQPPIAFIKTEVRGLFGSVFCDFGPEFTVFDVDGEEPHTGIIASVSNDNPALVSCVDDERLEFQDGDLVVFSEVHGMKELNDGKPRKIKNARAYSFTLEEDTTNYGSYEKGGIVTQVKQPKVLNFKPLKEALSDPGDFLLSDFSKFDRPPLLHLAFQALDKFISEIGRFPVTGSEDDAQKLISIASNINGNLGDGRLEDVNPQLLRQFSFGARAVLNPMAAMFGGIVGQEVMKACSGKFHPLFQFFYFDSIESLPTEPLDPNDLKPINSRYDAQISVFGQKLQKKLEDAKVFVVGSGALGCEFLKNLALMGVSCGAQGKLTVTDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAASINPSFNIEALQNRVGSETENVFHDTFWENLSVVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPSEYTKAMRNAGDAQARDNLERVLECLDKEKCGTFEDCITWARLKFEDYFANRVKQLTYTFPEDAATSTGAPFWSAPKRFPRPLQFSTSDPGHLQFLLAGSILRAETFGIPIPDWAKNPTKLAEVADKMIVPDFQPKKDVKIVTDEKATSLSAASVDDAAVIDDLILKLERCRSNLQPGFRMKPIQFEKDDDTNYHMDVIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLAGGHKVEDYRNTFANLALPLFSMAEPVPAKIIKHQDLSWTVWDRWIIKDNPTLRELLEWLRAKGLNAYSISCGSCLLYNSMFPRHKERMDRKVVDLAREVAKMDIPAYRRHLDVVVACEDDDDNDIDIPQVSIYFR*

Promoter(3k):

>AM04G021160.1
AGTTTCTTAAATAGTAAGCTAGTTGTTTAAGTGGATGTTACTATGCTACAAATTAGAACTCAAATTAGGTTCCACAACTTATTATACTTTGGTATGTTTACCGGTTAGCAAGCTAGACATAAAGTAAGTGGTTTGATGAGGATAACTAAGCTGGCACGTTGGAGTTGGCTGCTGGCACAACTGGTAGTGATGAACTAGTTTTCCATTGTTAAGAAAGAACTAAGAAATCCAATGGTGAACTACATAATAGTTGGTTGGTTCTTAAATGTACGAACGTGAAAGGAACCTCTCGCTGGAGGTGCTCTAAAATTCCTTAAAAAATTCTAGAAAATAAATTAATTATCATTTAATTTTTTATGCTCAATATTTTTAATAAAATTTTATTTCATATATGCATTTGATTTGCAAAAAAATTGAGGGACTAGACAACACAAAATTCATTAATATTCCATGTTTGATTTGAAAAAGGATCATGTTGACATGAGGAAGCAAGTGATGAAGTACAACACAGAACTTTATATTCCTATCTTCACCATATAGAGCCTTCAAAGCCCAATTAGCCCGATATTTAGGACATGTTCGACTCTAAAAATAGAGGCCAAAAACAACCTCAACTTTTGTCCTGATCAAATAAATGGGCTCAGGTCGAGCTAGCCCAATTTTCTTGAGTTTATTTAGTGTGTGTTTGTTTATTGCTCAGCGACGAAATGCTGCATTCACATTTCATGTTACTTTTATTTTTTTTTTGTAACCAATGCTTTTGTGCAAACAAGGTTTTCTTTTGTTGTTGTTGTAACCATCAATCTCGTTGAATGAAGCCTTTATTGTAGATTGCGAAAGACTTGAGTGAATCAAAGTTGATTTGTATTAAAATAAAATAATCTATTATTGTCAAAATAAATTGTGTACTTGATTTGTTTATTTTTTTTGTGGTCAAGGCTGTATTGATTTCATTAAACTTCAATTGATGAATTGAAAACAAAAAAAGGAAAGCAAAAGATCCAGCACTAGATCTACTTGTAGAAAGAAACCACGCATGCACCCATATGCAAGGGAAGATGAAAACCGGGTCCACAAAAAACCACACTACACAATGCGAACATGCAGCACCGAGGCCAAAACCCAAAGAGGGAGGTGTTGACAATCCAGGGAGATCGCACCACGCAGAGCTTGAGGGGGATTGATCAGTCGTTTGCCGAATAGGGAGCCAGAGCTCGCAAGGGCTGCTCACCCACGTAAATCCACATAGTACCCCTACATATCCCATTGCATTTACCTGATTATAAGCAACATATGAGTTAACCTTGATGAAAGGGGACGAGGTGGTCTCCAAAATTTAGGAAAGACTATTCCAGGCTTGCTAGGGGTCATGACCCAAGAAGTCATAGTAGTATTACTGGAGAATTCACTGCATTGATGTTTAATTTGAAACATAGCCTCCAAAGGGTTAGGACACTTTCTGTTGAAGGTAGCCTCATTTCTCATTTTCCAAATGATCCAAAAGGAATAAAAAATCCAAGAGATCCTATGGGCAATATAGGAAGATTCTCCCTAGTGTTCAGAACATCATCAAGCCATAATTGTATACTAGAAAGCCCTATGTTAGATGGAGGGGATATGTAATCAAAACCACTATGGCTCAATTCAAGGACAAGGTAAAAATAGGTGCTCCATAGTTTCATCCTCATACATGCAGATAGGGCCGGTGGGGGACTGTGCAGTTTTCTTTCTATATAAAGCGTTCCTAATAGGGAGAGCATTATGAGAAATTTTCCATATGAATTGCTTCACCTTTCATGGGACTAAGGCCTTCCATATCCCTTTTCTTAATTTGCATTGGGAAAGAGACAGAGGTAGAGGGAGTAAGGGCAAGGGTGGGTGGAGGTTTGCTTATGTAGTCTTGTATACCCAAATTTAATAGTATAATTGAAAATTGTTATTGCAAAAAATATAATAGTATTATTCGTGTTTGGTCTAATGGATTGATGTTATGAAAATAGGTGTTGGTGCAGCTTCAATTCACAACATTTGTGAAAATCGAAGCAGGCGATCAGGGTATTATATTTTTTTGCACCAACACTGAGTTTTCTTGTGAATATAACAATATTATTCGTATTATAGTCTTCGTATACTTATTTATTATAACTTTAAATATAAAATATAAAATTTACGAAAATAGAAATGATTTTTTTTATAAATATTTTCATTATAACTTTTTATTCCTAAAGCGTATGTTTCTTAATATTTTGAAATATTAATTATTTATTCTCAGCTGTGCTTACTGTGCAATGTCTACAACAGTACACAGTCGATCAATTCCATGTTGATGTTGTCTTAAACAGCAACGTGGCATGTACTCATCCGAAGCAATCGCACCTTTTGTCCACACCATACACCACCACCACACACCTACTCTCTCTCTCAGACAGAGAAGAAAGAAATGGTAATTGGTAGCGAATAAATGAAAATGAACAGAAGGAAAATCCAATGCACTAAAATGGAGCTCCCAAAGCCCTAGGTATTATTAGTAGAAAAAATAGAAGTTGAAGTGTTGAACACACTTTTATGCAAAAATCCAAAAATACCCCTCTCTCATTTCTCTTATAACCAAACCCTTTCTCTCTCATCACAGAACCCAAAAGAAAACCAAACTTTCTCTCTCATTCTCCTATTCTCGCCTCCCCAATCAGATTCCATTCCTTCCTTCTCCTGAGTTTCAATCGGTACGTTTCTTCCCTTCAATTCCATCTCCTTTCTAGATTCATCTTCCCTTTCTATTATTTTCTTCCTTCATCGTTCACTATTCGAATCACTTGCGAATTAGGGTTTCTATTTTACCCTTTTTGATTATTTGGTTTAATGTTTTCGAATCTTTTTCCCGATCATGATTCTAACTTGATTTCTTTTGCTTTTGATTTTATTTTTGTGTTTGCTTTTTCTGTTGCGTTGATAATCTCGATGGTGCGAATTTCTCGCGTGTTCAGCAGTTTACTGCACTAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00899.24	ThiF	95	474	2.70E-109
PF00899.24	ThiF	492	988	2.70E-109
PF10585.12	UBA_E1_SCCH	679	932	6.40E-84
PF16190.8	E1_FCCH	269	339	2.40E-27
PF16191.8	E1_4HB	340	410	2.60E-24
PF09358.13	E1_UFD	1003	1092	1.20E-22

Gene family

Gene family	Subfamily
Ubiquitin Family	ThiF

Gene Ontology

GO term	Description	Category
GO:1902494	catalytic complex	Cellular Component
GO:0006974	DNA damage response	Biological Process
GO:0019948	SUMO activating enzyme activity	Molecular Function
GO:0016925	protein sumoylation	Biological Process
GO:0004672	protein kinase activity	Molecular Function

InterPro

InterPro term	Description
IPR019572	Ubiquitin-activating enzyme, SCCH domain
IPR042063	Ubiquitin-activating enzyme E1, SCCH domain
IPR042449	Ubiquitin-activating enzyme E1, inactive adenylation domain, subdomain 1
IPR032420	Ubiquitin-activating enzyme E1, four-helix bundle
IPR042302	Ubiquitin-activating enzyme E1, FCCH domain superfamily
IPR032418	Ubiquitin-activating enzyme E1, FCCH domain
IPR033127	Ubiquitin-activating enzyme E1, Cys active site
IPR038252	Ubiquitin-activating enzyme E1, C-terminal domain superfamily
IPR018965	Ubiquitin-activating enzyme E1, C-terminal
IPR018074	Ubiquitin-activating enzyme E1, conserved site
IPR018075	Ubiquitin-activating enzyme E1
IPR035985	Ubiquitin-activating enzyme
IPR000011	Ubiquitin/SUMO-activating enzyme E1-like
IPR000594	THIF-type NAD/FAD binding fold
IPR045886	ThiF/MoeB/HesA family

trEMBL

trEMBL term	Description
A0A2K3NWV9	_

SwissProt

SwissProt term	Description
UBE12_ARATH	Ubiquitin-activating enzyme E1 2

KEGG

KO	Description	Enzyme
K03178	ubiquitin-activating enzyme E1	[EC: 6.2.1.45]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G06460	ubiquitin activating enzyme 2
Medicago sativa L.	MsG0580028473.01.T02	_
Oryza sativa L.	LOC_Os11g01510.2	ubiquitin-activating enzyme, putative, expressed
Cucumis sativus L.	Csa011643	_
Glycyrrhiza uralensis Fisch.	Glyur003567s00041497.1	_
Codonopsis lanceolata	Cl_chr06_30560T	_
Arachis hypogaea L.	AH07G13650.1	Ubiquitin-activating enzyme E1 2 like

Expression pattern