Gene detail

Detail information of Am04G020880.1 Annotation

Gene ID	Annotation
Am04G020880.1	pleiotropic drug resistance 3

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G020880.1	mRNA	Chr04	132375065	132388135	+

Sequences

CDS:

>Am04G020880.1
ATGGCAGCTTCTGACGGAAGCGAGTATTTTGAAATAGGTTCGGGTCGAAGTGAGAGTTTCGTGAGAGCGTCGAACGCCGATACGGTAGAGGAAGACGAAGAGGAGCTTCAGTGGGCGGCGCTTTCTCGTTTACCGTCGCAGTTACGCATCAACTACGCTGTTCTCCGCGCCTCCTCTTCTCGTCGCACACCTCCGCAAGCAAGCGGTGGTGATAACTTAGTCGACGTCAGAAAGCTGAACCGCTACCACCGTGAGCTTGTCGTCAAGAAAGCACTAGCCACTAATGATCAAGATAACTACCGTCTTCTCTCCGGCATCAAAGAACGCCTCGACAGGGTTGGAATTGAAATACCGAAGATTGAAGTTAGGTTCAAAAACTTGACTGTTAGTGCCGACGTACAAATCGGTTCTAGAGCTCTGCCAACCCTAATCAATTACACTCGCGACGCCATTGAGAATATCCTAACGAAATTGAAGATATTTCGACCTAAACGGCATTCCCTTACCATTTTGGACAATGTCAGTGGCGTCATCAAACCTGGAAGGATGACTTTGCTCCTTGGACCTCCAGGATCGGGAAAATCCACCTTACTCACGGCTCTCGCGGGAAAGCTTGATAGCAACCTGAAGAAAACTGGTAGTATAACATACAATGGCCATGACATAGATGAGTTTTATGTTAAAAGGACTTCTGCATATATTAGTCAAACAGATAATCACATTGCAGAACTGACAGTGCGAGAAACTCTGGACTTTGCTGCTAGATGTCAAGGTGCACAAGAAGGTTTTGCAGCATATACGAAAGATCTGGGCAGCCTAGAGAATGAAATGGGCATACGGCCTAGTCCTGAAATTGACGCATTTATGAAGGCATCATCTGTCGGGGGTAAAAAGCACAGTGTGAACACTGACTACATCTTGAAAGTTCTTGGTCTCGATATATGTTCAGACACAATAGTTGGTAACGATATGCTTAGGGGAGTTTCCGGTGGCCAAAGAAAAAGAGTTACATCAGGAGAAATGATTGTTGGTCCCAGAAAAACATTATTTATGGATGAAATATCAACCGGACTTGATAGCTCTACTACATACCAGATAGTAAATTGCATAAAGAATTTTGTTCATCAGATGGAGGCTACAGTACTCATGGCTCTTCTTCAGCCAGCTCCTGAAACATTTGAGCTATTTGACGATCTGGTGCTTCTGTCGGAAGGGCATGTGGTATATGAAGGACCCCGAGAAGATGTACTTGAATTTTTTGAGTCAATAGGTTTTCAACTTCCACCACGGAAGGGGATTGCAGACTTCCTTCAGGAGGTGACCTCTAAAAAGGACCAAGCCCAATACTGGGCTGATCCTTCAAAACCATATGAGTTTGTCTCAGTTCGTGAGATTGCAGAAGCCTTTAAAAATTCTAGATTTGGAAGGTATATGGACTCCTTGCAGACTCATCCGTATGATAAATCAAACTGTCATCCTTCAGCTTTGGCTAGAAAAAAATATGCTGTGTCAAAATTGGAGATCACTAAAGCCTGCTTTCAACGAGAAATCCTTTTGATCAAAAGGCATAGTTTTCTTTATATTTTCCGAACGTTCCAGGTTGCTTTTGTTGGATTCGTCACTTGTACAGTATTCCTGCGAACAAGGCTGCATCCTACTGATGAGGCTTACGGAAACCTCTATCTTTCTGCTCTGTTTTTTGGGCTCGTTCACATGATGTTTAATGGCTTTTCTGAGCTGCCTCTTATGATAACTCGGCTACCAGTATTTTACAAGCAAAGAGATAATTTATTCTATCCTGCATGGGCATGGTCTTTTACCAGTTGGATTCTCCGTGTACCATACTCCGTTATTGAGGCTCTTATATGGACTCTTGTTGTGTATTATTCCGTTGGATTTGCCCCTTCAGGTGGAAGGTTTTTTCGATACATGTTTCTACTTTTTGTAGTGCACCAAATGGCACTAGGTCTCTTCAGGATGATGGCTTCTATTGCACGAGATATGGTTCTTGCCAATACATTTGGATCAGCTGCTTTGCTGATTATATTCTTGCTGGGAGGATTTATCGTTCCTAAAGGAATGATTAAACCTTGGTGGATTTGGGGATACTGGTTGTCACCCCTTACCTATGGACAGCGTGCTCTTACAGTGAATGAATTTACTGCTACCAGATGGATGAAGAAATCAGCAATTGGGGACAACACAGTTGGTTACAACATCCTCCATTCACACAGCCTACCAAGTGATGGTTACTGGTATTGGGCTGGTGTTGGAATTTTAATAATCTATGCACTTTTTTTCAATAACATGGTCACGCTGGCCTTGGCCTATTTGAATCTTAGCAACCAGGGCTATGAATTGAGAACCAGTTCCCAGTCTACAAGAAACAACAATTCTACTGAAGGAATGATTCTTCCATTTCAACCGTTGACAATGACATTCCATAATGTCAATTATTATGTCGATATGCCGAAGGAAATAAGAAAGCAAGGCATACCTGAAACAAGGCTGCAACTCTTATCAGATGTGAACGGAGTTTTCTCACCTGGTGTGCTTACAGCATTAGTGGGGTCTAGTGGGGCTGGAAAGACCACTTTAATGGATGTACTTGCTGGCAGGAAAACTGGAGGGTATATCGAAGGAGACATCAAAATATCTGGTTACCCAAAAGAGCAACGCACATTTGCCAGAATATCAGGATATGTTGAACAAAATGATATACATTCTCCTCAAGTAACGATTGAGGAGTCGCTGTGGTTTTCTTCATCTCTACGCCTTCCAAAGGAGATTAGTGTTGATAAAAGACGTGAATTTGTTGAACAAGTAATGAAACTAGTTGAGCTTGATACTTTGAGGCACGCTTTGGTTGGTATGCCAGGTAGTTCTGGCTTATCAACAGAGCAGAGGAAGCGATTAACAATTGCAGTGGAGCTGGTAGCAAACCCTTCCATTATTTTTATGGACGAGCCTACATCTGGACTTGACGCACGTGCAGCAGCTATTGTCATGCGAACTGTTCGTAACACTGTTGACACTGGAAGAACCGTGGTTTGCACCATACATCAACCAAGTATTGATATTTTTGAAGCATTTGATGAATTACTTCTTATGAAACGTGGGGGACGAGTGATATATGGGGGAAAGCTTGGTGTGCAGTCGCAGATCATGATAGACTATTTTCAGAGAATCAACGGAATCCCCCCTATTCCTAGTGGATACAATCCAGCTACGTGGGTGTTAGAGGTCACTACACCAGCTGTTGAAGAGAGACTTGATGCAGATTTTGCAGAAATTTACAAGAATTCGGATCAATACAGGGGGGTGGAAGCTTCTATATTGGAATTTGAACATCCTCCTGCTGGCTCAGTACCACTGAAGTTTGACACCATGTATTCACAAAACCTATTGTCCCAACTTTATCTATGTATATGGAAGCAAAATCTCGTGTACTGGAGAAGTCCATCATATAATGCCATGAGGATATTTTTCACCACAATTAGTGCTTTGATATTTGGTACCGTATTTTGGGATGTTGGTTCAAAAAGGACATCAACTCAAGAGCTGTTTGTGGTTATGGGAGCTCTTTATTCCGCATGCTTGTTTCTTGGTGTAAACAATGCTTCTTCTGTACAACCGATTGTTTCAATAGAAAGGACAGTATTCTATAGAGAGAAAGCAGCAGGAATGTACTCTCCCATTGCATATGCGGCAGCCCAGGGACTTGTAGAGTTACCATACATTGCTGTTCAGACCATAGTATTTGGTGTATTAACATATTTTATGGTGGATTTTGAGAGGACGGCAGGAAAGTTTTTTCTCTATCTTGTGTTCATGTTCCTAACCTTTACCTACTTCACCTATTACGGCATGATGGCTGTTGGTCTTACACCTTCTCAACAGCTAGCAGCTGTTATTTCTTCAGCATTTTACTCCCTTTGGAATCTTCTTTCAGGTTTCCTAATCCCAAAAGCGAATATTCCGGTATGGTGGATTTGGTTCTATTATATCTGCCCTGTTCAATGGACGTTACGAGGTATCATCACGTCTCAACTTGGTGATGTGGAATCCAAAATTGTGGGACCTGGATTCGAAGGCACTGTTAAAGAGTATTTATCTGCTACTCTTGGATATGATCAGAAAATGAATGGAATTTCGTCCGTGGGGCTTTCAGTGATAGTGCTTATTGCATTTATTCTTCTATTCTTTGGTAGTTTTGCTATTTTAGTTGCTGCGAAATACATGGGGATAGTGCTTGAGCCTTCAGAAGATGATCATAGCACGATGATCCGAGAAAGCATCAGCTACGCCGGTTTGAAGGATAAAGTGGAGCTCAAAGTTCAAGTGGTTGGTGATGACCGTGAGGTCACTAGTATCACTTATCGCAAACCGGAGCGCAGAGACGATGGCCGCATTTACTTCTCGTCCATGAGGATTAGGACGGATGACGATGTACAAAGCATGTTGAACATCCATGACATGCTTCAGAAGCGTAGGTCGTTGGAGCTGTACGTGGAGCATCATGTCGGAGCGTCCATGGGATTTTACGTTGTTTTTATCCAGTAG

Protein:

>Am04G020880.1
MAASDGSEYFEIGSGRSESFVRASNADTVEEDEEELQWAALSRLPSQLRINYAVLRASSSRRTPPQASGGDNLVDVRKLNRYHRELVVKKALATNDQDNYRLLSGIKERLDRVGIEIPKIEVRFKNLTVSADVQIGSRALPTLINYTRDAIENILTKLKIFRPKRHSLTILDNVSGVIKPGRMTLLLGPPGSGKSTLLTALAGKLDSNLKKTGSITYNGHDIDEFYVKRTSAYISQTDNHIAELTVRETLDFAARCQGAQEGFAAYTKDLGSLENEMGIRPSPEIDAFMKASSVGGKKHSVNTDYILKVLGLDICSDTIVGNDMLRGVSGGQRKRVTSGEMIVGPRKTLFMDEISTGLDSSTTYQIVNCIKNFVHQMEATVLMALLQPAPETFELFDDLVLLSEGHVVYEGPREDVLEFFESIGFQLPPRKGIADFLQEVTSKKDQAQYWADPSKPYEFVSVREIAEAFKNSRFGRYMDSLQTHPYDKSNCHPSALARKKYAVSKLEITKACFQREILLIKRHSFLYIFRTFQVAFVGFVTCTVFLRTRLHPTDEAYGNLYLSALFFGLVHMMFNGFSELPLMITRLPVFYKQRDNLFYPAWAWSFTSWILRVPYSVIEALIWTLVVYYSVGFAPSGGRFFRYMFLLFVVHQMALGLFRMMASIARDMVLANTFGSAALLIIFLLGGFIVPKGMIKPWWIWGYWLSPLTYGQRALTVNEFTATRWMKKSAIGDNTVGYNILHSHSLPSDGYWYWAGVGILIIYALFFNNMVTLALAYLNLSNQGYELRTSSQSTRNNNSTEGMILPFQPLTMTFHNVNYYVDMPKEIRKQGIPETRLQLLSDVNGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQRTFARISGYVEQNDIHSPQVTIEESLWFSSSLRLPKEISVDKRREFVEQVMKLVELDTLRHALVGMPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLGVQSQIMIDYFQRINGIPPIPSGYNPATWVLEVTTPAVEERLDADFAEIYKNSDQYRGVEASILEFEHPPAGSVPLKFDTMYSQNLLSQLYLCIWKQNLVYWRSPSYNAMRIFFTTISALIFGTVFWDVGSKRTSTQELFVVMGALYSACLFLGVNNASSVQPIVSIERTVFYREKAAGMYSPIAYAAAQGLVELPYIAVQTIVFGVLTYFMVDFERTAGKFFLYLVFMFLTFTYFTYYGMMAVGLTPSQQLAAVISSAFYSLWNLLSGFLIPKANIPVWWIWFYYICPVQWTLRGIITSQLGDVESKIVGPGFEGTVKEYLSATLGYDQKMNGISSVGLSVIVLIAFILLFFGSFAILVAAKYMGIVLEPSEDDHSTMIRESISYAGLKDKVELKVQVVGDDREVTSITYRKPERRDDGRIYFSSMRIRTDDDVQSMLNIHDMLQKRRSLELYVEHHVGASMGFYVVFIQ*

Promoter(3k):

>AM04G020880.1
ATGCTGAAACTTCACTTTCCCCCTTCACTTTCGCGTTCCCTCTCTTCTCTTTTGCGTTTCCTCTCTTCTCTTTCACAGAAACCTTTTCAATAAACAATCTGAGAGTTTCGCCTTCCCTCTTCATTTTCCCTCTCCACTTTCGCTCTTCACTCAACTCTCAGTTGCTTTCACTGAAACCCTTTCGCTGAAACCCAGTCGTTGAATCTTCAACTTTCAAAACCCAATCGCTGAAACCCTTTCGCTGAATCGCTGAAACCTTCTTCGCTGAATCTTCAAAACCCAGTGGCTGAAATCACTGAATCGCAAAACCCTCTTCGCTGAAACCCTTTCACTCGCGAAACCCTATCACTCGCGAAACCCTATCACTCGCTGAAGCTCTTCCGAAGTTCTATTCACTCGCGAAACCCTTTCAATCGTTGACAGCGTCTCCTCCTCGCTGAAGCTCTGTTCTTCTCCCTCAAAGACTTTCGTTGTTCTGTTTCTGGAAGGATGAAGGAAAGGGTTCTGGTCTTTTGAGGAAAGGGTTATGTTCTTCTCCCTCAGTCGCAATTTCTCTTGCTTTTTGCGTCTCTGCATCTGAAGATTTTTGAGGTAATGTTCTCCATCTTTTAAATTTTCTGCAGTTTTGATTTTCTTCAGTTTTGATTTTGTGTTCTGTTTCTGCATCTTAAGTTTTTGATTATGTAATGTTATGTAATGATTATGTGTGTGATTCTGAATGTTATGTAATGATTATGTGATTCTGAATCTATCATTTTGTTTGTAAATCCTCATCTTGTTACAGTCAAGATTTGAAGAGGAAGGTTCGAATTGAAGAAAGGTCGGCAGCGTCGACGACGACTTCTTCGAGTTTCACAGTCAAGGTAATACCGTGTTTTGCTGAAACTATTATTTAAAAAAAAAACTCCTACAAATCACTCGAGTTAGGGAGGTTTATAACCCCCTCAAAAAAACCTCCACTAATTGTGGGGGTTAAAAACCCCCGCAGTAAAACCCCCGCTAACAGTACCGATACCAGCGTTTCCTTAAAACCCCCGCAAACAGATTGCGGCACTTGATTCTCCGGCGTTTTTTAAAACCCCCGCAGAATATGTTGCGGGGGTTTAAAACCCCCGCTAAACGACTTAAAAACCCCCGCAATCCGTTCCGTTTTTTGTAGTGGTTTATAACTAGAAATCAAGACTAATAAGGGCGAGTGTTTTGATGAAGGCTTTGTTGACTTGTGTCATAAAGAAAACTTTGTTAAAACCATGTTAAGTCCTAGACATAGGATAACATAGTCCTTAGGGTGATACAATGGGTACTATTAAGGCAGGAGTGAACTTATTTAGCAAGCCTAGACATAGGAAGCTTGTAACGAAACTCTGAAGAAAGTAGCTGAAAGGCACATACTGAGATGCAGCTGCACTCAATGCATCTGCACCACATAAACACACAAAACTCTCAAAAGTGAATTATTTAGTGAAGACATCTCAACTATCATTCTCAACTGATTTCCTCCATATTTTCTTGCACATTTACATTCTGTTTTCCTAAACATTAAACACCCAAAATTGTGAGTAATGTAGCTGCACTAGCTTATGCTTTCTAAACATACAAAAGTTTAACCAATCCCTGTGGGTTCGACCTTTCTCATCACTATATTACTTGTTTGTGACTGTGTATACTTGCACATCTTTTCACACACCAGTTACGAGCCCGGATCTCAGCAATCTCAGCTTCTAACTGGGTGTACTGTTGGCTTTCCTGCTGGTCGGCCTCGGCTTGCCGATTTAGAAACTAGACGAGCTGTTGAATAGCATCGACCGGTACCTGGACCGTCTGTGGGGGAAGTGGAAGTCGGTGCCGGACTCAGCTCCCAGGAACCATAGTCGTAGCCGAGCTTCGAGCATGCGTCGGGCTAAGGAGTAAGGTGACTGCCACTCCTTCTGGAGTCACCTGCTGCAGAACCGGTCCCTCAACGACACTCAGGATAGTCCTATGACGTAAGGTCGGAGCCATCGTTAATCAAGGAGATTGGAGAGGAACTAGAGTACAAGATTCTCCCACTGTGGTCGCCAATGTTCTGTACCGTATCTCGGAAGGTATGGACGATCCAGGATAGTTGGTAGTAGTAGGTCTTGATTAACTGAGCTCCATTGTGGAGTTCCGATCCTAGATGGAGTTCCGGTCTTGGATGGAGTTCGATCTTGGATGGAGTTCCGATCTTGGATGGAGTTCCGATCCTAGGTGGGGGGTACCTGCAAAGACACTCTGACGCTCAAGTTAGGAAGTGAATTGATTAGAGGTAAGAATATAGGAGAGAGTGTGTACCTTTGACATTGCATTGAATGCTTATTTATAGAGTAAAGGTGTGTTGACCTAATGAATCAGAGTCGTTTGATCTAGGGCCTAGATCTTAGCCGTTGATCAATGAGTTTGCTTTTGATAATGGGCCTCACTATTGATGATTGGGCTCAATCGTAACACTTGTACTTAATTAAACGACAATGTTCGGTGATAACTATTTTTCTTTTTTTTATGTAAATAATTATTTTTCTTGAATGTAGGTAGTAGTGGTAATTTGTGTAATTGTTCTAGAACAAATCATGAACAGCTGTTTTTTTACATGAATTCTAGAACAATTTTTGAGTATAAATACAAGCACGTGAGTAATGAGTCATCGAAGCTAGTTCACCATCAATAAAAGACGCATATCGAAAGAATAGGACAAAGTCACTCCAATAGTTAGCCATCTTGGGGCTAGCTGCAATCATTTAATTTGCATGCACACACACCATTTCCCCATAGCAATAACGAACTCGAGCGCGAAATTAGGAGGGCATTTCCGTCATCTCACTCACCAGCCTTCAACCACCTTCTTCAAGTAACTCAAAGTTCCTTCTCAAACACAGAAAATCTCTCTCTCCCATTCTCATTCTTCTTGACGCAAAACCCAAACTATAAAACCGTTACAGAGAGGCAAACACAGTTTCAAGGAGAAAACAGAGAGAGAGAGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01061.27	ABC2_membrane	510	720	6.00E-97
PF01061.27	ABC2_membrane	1138	1350	6.00E-97
PF00005.30	ABC_tran	171	354	1.70E-42
PF00005.30	ABC_tran	840	992	1.70E-42
PF08370.14	PDR_assoc	725	781	7.10E-18
PF19055.3	ABC2_membrane_7	387	437	1.50E-16
PF14510.9	ABC_trans_N	85	145	6.10E-11

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0005524	ATP binding	Molecular Function
GO:0009738	abscisic acid-activated signaling pathway	Biological Process
GO:1901656	glycoside transport	Biological Process
GO:0015562	efflux transmembrane transporter activity	Molecular Function
GO:0140352	export from cell	Biological Process

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR013581	Plant PDR ABC transporter associated
IPR034003	ATP-binding cassette transporter, PDR-like subfamily G, domain 2
IPR034001	ATP-binding cassette transporter, PDR-like subfamily G, domain 1
IPR029481	ABC-transporter, N-terminal domain
IPR013525	ABC-2 type transporter
IPR003439	ABC transporter-like, ATP-binding domain
IPR043926	ABC transporter family G domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
G7KE48	_

SwissProt

SwissProt term	Description
AB31G_ARATH	ABC transporter G family member 31

KEGG

KO	Description	Enzyme
K08711	ATP-binding cassette, subfamily G (WHITE), member 2, PDR

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G29940	pleiotropic drug resistance 3
Medicago sativa L.	MsG0580028406.01.T01	_
Oryza sativa L.	LOC_Os01g42410.1	pleiotropic drug resistance protein, putative, expressed
Cucumis sativus L.	Csa011767	_
Glycyrrhiza uralensis Fisch.	Glyur000383s00019455.1	_
Codonopsis lanceolata	Cl_chr06_28580T	_
Arachis hypogaea L.	AH17G14160.1	ABC transporter G family member 31 like

Expression pattern