Gene detail

Detail information of Am04G020790.1 Annotation

Gene ID	Annotation
Am04G020790.1	myb domain protein 119

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G020790.1	mRNA	Chr04	132139581	132141467	-

Sequences

CDS:

>Am04G020790.1
ATGGTAAGAGGAGGAAGTCATGGTGATAATGACGTTGAAATATTTGGGTATGAAAATATAAATGCCAACGACCCTTTCATTGACAAATTTTTATGGGGCCAAATGATTCACTACCCTCATCACCATCAACATGCAACAGAGAATGTTGCAAAGTGCAACAACAATGCAACTATTTTTAATGAAACCATGCAACTATTTCCTTACTCTGTTGGTTCAAACTTTTTTGTTGATGGGGTCTTAGCAAATGAAGAGGCTTTGAAGGGGTCAAACTCCACATTGAGTCTAAAGGAGATGCATGTTTTGGATGAAAACACAAAAGGGGTGAGAAAGAGAACAAAGAAAGAGTCTTCTGTTCATTTGATCAAAGGACAATGGACCAATGAAGAAGATAGGAAATTGATAAGGTTGGTGAAGCAATATGGTGAAGGAAAATGGACTCAAGTAGCTGAGAAGTTACAAGGAAGAGCTGGCAAACAGTGTAGAGAGCGATGGCATAATCATTTGCGTCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAAGATATTAGTAGCTACACATGCAAAGCTTGGAAACCGTTGGGCTGAGATTGCAAAGAGGATTCCAGGAAGAACAGAAAATGCTATAAAGAATCATTGGAATGCAACTAAAAGGAGACAAAACTCAAGGAGAAAAAACAAGAAAAAAATTGATCAATTTTCTAATGGAAAGCCAAAGTCTTCTATACTTGAAGACTATATCAAAACCAACACTCTTACAAATAACACCACCATTATTACTACAAACACCCCCACCATGTCCACTTTCTCCCATACAACACTCTCCCATGACCCTTCAGCAAATCAACTATACCCTTTGTTCCCTGAACTCTCAGAATCAATTTCCAGTGAGCTACTCTTCATGCAAGAAATTTTCAATGAGAATAATCAGCAATCGCTGCAGGTTAATGTTGAAGACTCTAATAACAACTCCAAAATGTCTTCAACATCATATTTGGATTTTGGTGAAACTAATGTTGATGATGTGAATGAGTGTGGGTCATTTGTTCTCCCTAGAGAGACTCCAAACACTAAGAAATACCTTTCTTATGATCTTTATCTCTCTCAGTTGTTGAATTTATAG

Protein:

Promoter(3k):

>AM04G020790.1
GGTATTTCCGGAATGTTTTTTTTTGAAATTTCGTTTTAATTAATTTTTTTTTGCTTTTTCAGTGGCAACCAGAACAGGAAACATAGAGCGAGGTGAGCATTCAGGAGCGGGAGGAGATGAGCAGAGTCCTTCTTGCAGTAGGAGTAGGTTCCGATTGAGACTAGACAGGCCGGACACGCGTCTGAGCGTCAGAGACGTGTCCGAGAGCGAGAGCAGCAGCAGGAGACTGAGTCAGACGCCATGCATGTAGATGACCAGGCTGAGGCTGGGGTTACTCAGCATGATGATGAGGCTGCTGAGCAGGTTTTGTTACACCGGTTGCATGTCCACTGCGTCCAGAGACTACTACAGACGGAACAGGTAATACTTTTAATAATTTGTTTATTTTTTAACAATTAATTACTTTTAATAATTTATTATTACTTTTATTTTTTACAGGACCGTGGTAAGATTAAAGTTGCTTCTCATGGGGGGAAGATACTGAAGATGAGACCTCAGCAACACCACCCACATATTGCAGGATGGTTGCAGCAGGCCCATCTGTTTGAGCTGGACATCACACCTCTCGGCAACATCAACCACGAGCTCATATCAGCTTTTGTGGAGAGGTGGCATTCTGAGACAAGCTCATTCCACATGCCGTGGGGGGGAGATGACCGTGACGTTGGACGACGTGTCCGCGTTGCTCCACTTGCCGCTCACCGGCACACCGTTGGCGCATCGGCCACATTTTGACACTGCCGATGCTATTCGGGCTAGAGTTGACCTACTGGGCATTGACCACACAGCCTGTTGGGCAGAGTGTCAGTTCAACAGGGGACCGGCATTCCGATTTTCTTTCTTGATGGCCGCATACACACAGAACATGGAGTGCGGCCATCTTGATCAGGCGGCACGGTGCTATCTGCTACACTTGTTGGGCAGCACTATTTTTGCCGACAAGAGTCACACATCTGTCCCTGTCAAGTGGGTGACTCTTATTTCGGACTTTTCCCTGACCAGTGGGCTTGGGGTCCAGCTGCTCTAGCTATTCTCTACGAGCAGCTGAATGATGCTTGTTACTGGGAGACGTCGCAGATTGGCAGATACGCTTCTCTGCTGCAGGTAACTAAATTATTTTTAATTACTTTTATTTATATAATTACTTATTTTTTTTTATTATTTTAGTGCTGGATATATGAGTATTTCCCCACCATCGTGGTGCGGAAAGACTTCGGTGACAATCAACTTCCACGTTGCAGCAGGTGGGCGAACAAGAAGTGCGATAGTATCAAGCTTCCGGAGTTTCGGCAGCTGCTGGATGACTTGCAGAGGGAGCAGGTCATATGGAGCCCCTGAGACGACCACAGACAGTACCTCCGGTTTCACAACATTTCATTATTCAGAGGTTGGCTGCTGTGGGGGGATGTGGCGGTGCCTTATATGCCAGACAGTGTCCGTTGGCAGTTTGGATATGTCCAGCAGATTCCTGATCCACCTATTTCGGGCCAACGTCCATCTCCGGAGGTCATAGTACAGCAGCTGATGTTCTATCAGTCCCCAGCGCGGGCTTTCAGGGACAGTGGTCGACGGACACCCGTCCAGGGTGCTTGTGATGACGAGTATACCTACCATGGTACTTCCAGGTGTCCATTCCCCGCCTGACTCCGGCTCCGCCTTCACCTCCAGCTCCGGCTTCGCCTCTAGAGGATGTTGGTCCACTTCCCTATGAGTCCAGGGAGAGTGTAGCTAGGCATGTCCAAGATGCCTATGATAGTCTTTTGGCAGTTGACGGCATTCCTGGGGATGTCTATGATAGTCTGTTGGCTGCTTTACAGCTTTTGGACATTTAGTTGTATTATTTTTTGTATTTTTATTGTATTAATACTGATTATTATTGTTTATTTGTTTTACCAAGTTTCGTTACATTTAATTATTTCGCGTAATTTGATTTCAAGTTCGGTTACAATTATTTTGCGCGTTTTTAAATAAAAATTTTTTTTTTACAAATTTCCGGAAATACACATATTTCAGGAAGGCAGAAATATGGGTTTTCCAGAAATACCTCAGAAAAAGGTATTTCCAGAAATATGTATATTTCCAGAAATTTGTAAAAAAAAAAAAAAAATTTACGGGTATTTTGGGGATTTAGCGTAAAAAGGGGGTATGTGGTTCAAGGGGGGTAAAAAAAAACACCCACAACTTTTTAACCATCATTAAAAATGTTTGTTGAGATAGGTCGACATTTTTGTTGTGGAATACTTAGCAATTGAGTAATTACTCCCTCCGTAGCAAAAATGAGTTAACGAAAGATGACATATATAGTCCAAATTTTGTACTATATACATTTGTTGCCCCATTTTTGCTTATTATATTATGTTACGGAGGGAGTATTACCTACAAAAGAATAAATAACGGGATATGATTTTTCATCTAATTATTTGAAATGTTTATAACTCTATGCATGAACCTTTTTTTGATAAAAATTCTATGCATAACATAAAAGTCACAATATGTGTTTTTTTTACAAAGAATATGTATGTGGGTTTCTGCTTTAAAAACTATACGAAACCATTCATATAAGAAATTTTTTTAAAAAAAATGTATTAAATATATATATAATAATGACCCATAACTGAAAATTAAGTCTAATTTATGTCAATGTATTCAAGTATTCCATTAGGATGATATTAAGGAATAATTCAATTTCAACTAAATATAAAATAAAATTAATAAAAATTAAAACTTACATTTACAAATAGTTAATACTAATATGATTAATAATATCCCTTAATTCCTCCTCATTGCCTTTTGGTCAAATTTATGTTCAGGAACGTTACAACATTCCTAACCCTTGGATATATATCATATAATCAATGGCTACTTATCCAGGTGGCTTATTACGTGGCTTGGAATAAGCTTGTTTGTCAACCATTTTATATCTAATAAAACAAGAACATTAATCCTCCCTATAAACTTGTCCTTGCACATATGATTCCCTTCTCCTCTCTCATTGAAAAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	122	168	3.80E-33
PF00249.34	Myb_DNA-binding	174	216	3.80E-33
PF13921.9	Myb_DNA-bind_6	125	183	2.40E-25
PF13921.9	Myb_DNA-bind_6	177	223	2.40E-25

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Molecular Function
GO:0006357	regulation of transcription by RNA polymerase II	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
G7K6C7	_

SwissProt

SwissProt term	Description
MY119_ARATH	Transcription factor MYB119

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G58850	myb domain protein 119
Medicago sativa L.	MsG0580028022.01.T01	_
Oryza sativa L.	LOC_Os06g06740.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa005208	_
Glycyrrhiza uralensis Fisch.	Glyur000817s00031374.1	_
Codonopsis lanceolata	Cl_C15344_unscaffolded_00010T	_
Arachis hypogaea L.	AH12G25870.1	Uncharacterized protein like

Expression pattern