| Gene ID | Annotation |
|---|---|
| Am04G020130.1 | RING/U-box superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G020130.1 | mRNA | Chr04 | 128689564 | 128696912 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13920.9 | zf-C3HC4_3 | 433 | 476 | 2.10E-10 |
| PF13639.9 | zf-RING_2 | 434 | 473 | 1.30E-09 |
| PF00097.28 | zf-C3HC4 | 435 | 472 | 5.80E-09 |
| PF13445.9 | zf-RING_UBOX | 435 | 470 | 9.70E-09 |
| PF13923.9 | zf-C3HC4_2 | 435 | 472 | 1.10E-08 |
| PF14634.9 | zf-RING_5 | 435 | 473 | 2.60E-08 |
| PF14447.9 | Prok-RING_4 | 435 | 476 | 5.60E-07 |
| PF12678.10 | zf-rbx1 | 433 | 473 | 1.20E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| GO term | Description | Category |
|---|---|---|
| GO:0061630 | ubiquitin protein ligase activity | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0016301 | kinase activity | Molecular Function |
| GO:0016874 | ligase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR017907 | Zinc finger, RING-type, conserved site |
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR044235 | RING finger and transmembrane domain-containing protein 1/2 |
| trEMBL term | Description |
|---|---|
| A0A1S3DZ28 | _ |
| SwissProt term | Description |
|---|---|
| RNFT2_HUMAN | E3 ubiquitin-protein ligase RNFT2 |
| KO | Description | Enzyme |
|---|---|---|
| K22379 | E3 ubiquitin-protein ligase RNFT1 | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G01960 | RING/U-box superfamily protein |
| Medicago sativa L. | MsG0580028185.01.T01 | _ |
| Oryza sativa L. | LOC_Os01g07390.1 | zinc finger, C3HC4 type family protein, expressed |
| Cucumis sativus L. | Csa016067 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001611s00032565.1 | _ |
| Codonopsis lanceolata | Cl_chr03_45460T | _ |
| Arachis hypogaea L. | AH17G15330.1 | RING finger and transmembrane domain-containing protein 2 like |