Gene detail

Detail information of Am04G020010.1 Annotation

Gene ID	Annotation
Am04G020010.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G020010.1	mRNA	Chr04	127253510	127256022	-

Sequences

CDS:

>Am04G020010.1
ATGAAGTTCCAATCCTTAATTGTTCCATTTATTCAACTAAGCTTCATACTATCATCACTCTTTGGCTTGATTATAGCTGACTTCAACTCTGACAAAAAAGCTCTCCTTGAGTTTTCTTCAAGTGTCCTACATTCTCCAAGATTGAACTGGAATAACTCTATTCCAATTTGCTCTTCATGGACTGGTGTGACTTGTAACTCAAATGAAACTCATGTTATTAGTATCCATCTTCCAGGAATTGGATTCAAAGGCTCCATTCCAAACAACACCTTAGGAAAACTTGATTCACTTCGAATTCTTAGCCTTCATTCCAATGAACTTAGTGGAAATCTTCCTTCTGATATTCTCTCTATTCCTTCACTTCAATATGTAAACCTTCAACACAATAACTTCACAGGCCTAATCCCTTCTTCGGTGTCCACTAAACTCATTGCACTAGATCTTTCCTTTAACTCTTTCTCTGGAAGAATCCCATCTAAATTTCAGAATCTCAAAAGACTAAAATATTTGAATTTGAGCTACAATAACTTGAATGGTTCAGTTCCAATTTCCATTAATCAATTTCCCTATACTTCTTTTGTTGGTAATTCTCTCTTATGTGGTCCACCTCTCAATCAATGTTCTGCAGTTTTTCCTTCTCCTATTCACCAACCACTCACTCCATCAGCTAGACAAAATCAAAAGGCTACAACTTCAAAGAAATTCTTTGGGGTAGCTTCTATACTTGCTTTAGCAGTTGGGGGATTTGCTTTTCTATTTCTCCTAGTTTTGGTTATCTTTGTATGTTTCTTGAAGAGGAAAAAGAGTAACATATTGAAAGGAAAGGCAAATTGTGCTGGAAAGACTGAGATTTCTAAGAGTTTTGGAAGTGGGGTGCTAGAGGCTGAAAGGAATAAGTTGTTTTTCTTTGAAGGTTGTTCTTATAGCTTTGACCATGAAGATTTGTTGAAGGCTTCAGCTGAAGTTCTTGGAAAGGGAAGTTACGGAACAACATATAAGGTTACACTAGAGGAGGGAATAACAGTGGTAGTTAAAAGGTTGAGGGAAGTTGTGGTTAGAAAAAAGGAATTTGAACAAGAGATGGAGTTTGTAGGAAGAATTGGCCAACATTCTAATGTCATCTCCCTTCAAGCTTATTACTATTCTAAAGATGAGAAACTTCTAGTTTATAACTACATTTCAGGAGGTAGCTTGTTTTCATTGTTGCATGGAAACAGAAGTGCAGGAGGAACTCCACTAGTTTGGGATTCAAGAATGAAGATTGCACTAGGAACTGCAAATGGAATAGCTTCCATCCATAAAAAGGGGGGTCCAAAATTTGTTCATGGAAACATAAAGTCATCAAATGTACTCATAACACAAGAACATGATGGTTGCATCACTGATGTTGGACTAACTCCACTAATGAACACTCCATCAACAATGTCTCGAGCCAACAGTTACCAAGCTCCGGAAGTGGCTGAGTCGAGAAATATCATGACCCAGAAGAGTGATGTTTACAGTTTTGGAGTACTCCTTCTTGAAATGCTTACAGGGAAGATACCATTTGGATATCATGGTTATGATCATGACATAGTTGATCTTCCAAGGTGGGTGAGATCTGTGGTTCATGAGGAATGGACAGCTGAAGTTTTTGATGAGGAGTTGATGAGAGGAGAATATGTTGAAGAGGAAATGGTGCAGATGCTTCAGATTGCACTTGCTTGTGTTTCAAAGGTGGCAGATAATAGACCAACAATGGATGAAGTTGTTGGAAATATAGTGGAGATTAGATACCATGAGTTGAAGAACCGTACATCCTCTGAGTCTGAATCTAATTTACATACACCATGA

Protein:

Promoter(3k):

>AM04G020010.1
CTAATATTTTTAATTTTAAATTTAATATTATTTTTATTTTTATTTATGTTTTTAATATATATATATTTCAATAGATTTAAAATTTTTATATTTTAAAATGTATTTTAGAAAGGTAAATAAAAAATTTATTTTCTAATTCTATCCTACTGGTTTCTAACCTAGCTGAAGCTCAGGATAAATTTTTTAACTACAGAGGTAAGATAGGATAAGTCACAAGATTAAGTTATCATATCCTCCTCAACAAACACTAGGCTGACATAGGATATGATAGACTTATCATATCTTGTCTCCTTATCCTAACCACCAAACGGCCTATGCTTTTATCCTTTGACGTTAGGCTAATTTCAACTATAATTAGCCGGTGGATATTAATGTACTTACCGAACACATCTAAGTAGCTAACAACATTGACAAATAATTTACATTTTAAGGAAAAATCAATGTAAAATTTGTAGACTCGTAAACTCGAAGTAAAATCGAGAGTTTGCCAATTTTATTAGAGTTTTCTTGAACTCGTACGAGTTTACGAAAAAGATAGTTTACCTGCAAGTTGACTCGGTTTTTTGTTCTAGACTCGTAAGAGTTAACTCGAGAATTTAACAACTATGACAATGACGTACACTCTTATTGGCTCTACCTATATAATCTCGCCTTCAACCCTGAAGCACATACGAAAAGGAATTTGAAATATTCTAATGCACATATTGTGAATATCCAAGGAAATCCAAACAAGAGCTGAGCCAAAGAATAGGCTTCATTCTTTACTCTTTCTAAAACTATTTTACTTGTAAAATCTAAACATTATTTTGTAAAGCTCTCGTTAAGAGAAGATACATCTTTATTTCAAACTTATTTGAAAACGTATATATTTCCCAGTTGTGGCAATTCCTTAAAGGCCTTATTGTATTTGATCGTTCTAAGAAGTTAACACTTAAGTAAATGTTGGTAGAAAAACTCTTAAGGTTGTAACTTTTGAAAATAGTGAAATCCTTCAAGGATATAAAAAGGACTATACTAGCTACTGATAGTGAACCGTATTATATCTTTATATCTTTTATATTTCTGCATTTACAATACTTGATTTCTTAAAACTACTTTGTTTAAACAACATTGAAAAACAAGTTTGCTAAAAGATTTTAAAAATACCAATACAAACTCCCATTTTTTGTGTTTTTTTCCACATTCACATTATCAAATTATTTGTGCTATTATTACACTTTTTTACGCCATTATTTCACTGTTTAGCATTCTAAAATTGTGGTGTGATAAGTTGACTTTGTTCTATAATTTATTATGCTCTTATTAATTTTTATTATATATATATATCGATATATATTAATTTTAATAATATACTTTTTTATTAAAATATATGTATATATTACTAAGTTAAAGAAATTTGGCGCCCCCATAAATTTGGGCATGGGAACTAGTATTATCAATTAATTTGCGTGTGTGATGGTACTTGTTGATCTATCTAAAAAAAGGAACCCATATTAGTCTCATGTACGCAAAGATGGTTAGAGTGTGTTCTCATCTTATCTCCTGGGCTCTGTTTAGTAAAAAGTAGCGGATAGCGGATAAGCTAGCAGATAGTGGGTAGCTGATGAGCAAGTGGATCGCAATCACGTGTTTGGTAAAACTAGCGGTTAAACCAACTAGTAAATGTAAAACGATATAAAACAAATAAAGACTTGAAATTGTTTAGTTTAATTTAAAGAGGGTAGAGAAGAAATTTAAGAAAAATAATGAGCGTAAAAAGGACAAATACGCTAGCGTTTCAAAAAAAACGCTACTTGAAGTAGCGTTTTTAAAAATGCTAAACGCTAGTACTTACCGAACACATCTATTCATCATCTGCTAGTTAAATCCGATATCCGCTGGCGGATGAGACTTCCTAGTTAAATCCCAAACATAGCCTTAACATAGCCTTCATTTGTAAAAGGCTGGGCACGCCCTGTGCTCCGTTTAATACAAAATTGCTTATCTAAAAAAAAAATATTGGTGAAGCAAATCTCACATAATACATTGCATATTCTTGTGTAACCACGCTCCTCTATTTCAAACGTTAGGCTTTAGAGTCATGAAACCTATGCTTTTATCCTTTGACGTTTGGCTAATTTCAACTATAATTAGCCGGTGGATATTAATGTAATGGTACTCGTTAGTTAAGACAGAAGGCTTTGTTGGTTAACACAATCATTATTGCTGCCATTGTAGTTAAGTAGGAAAGTGAATTAATTAACCTCTTTGTGTGTCAATTAATATCTTTTGACAAGATTAGAAATCAGATTCTTATATTGCATATAAAATTGTAACGCTCAGTATTATGCCACCGACTCCAACAGTCTTACATTAACCTCTTTATCTATTCCATAGTTTCATGTCATTTGTTATGTGCTTAAAAACTTTAGGCCTACTTCACTCATTTCAATTGACTCTCATTTTAGTGAAAAGAGGGAAATTTTTAGCTTTGTAATACTTTTCTTCTTGTATTGGATTGTATTGTATATAGTGTCTTCAAAGCCTCAAACTAATTTCATATAAAGGTAACCTCTCCCACTTCCTCTAAATTCAAAGTTTGAATTTTATACTTGCAGTCACCAACTTAAATTGTTTTATATAACATTGAAAATACATGGCTTTAACAGATCTGCATGCTAGCATTGAAAATTATTCAAAGTGCATTTTTTTTGACATTTGTATGTTTGAATGATGCTTTGTTTTCCTGACTTCATTGGACCTAATGATTAGGAGAATATTGCAGCCTACTTTTGCAAATAATGCTACTTCTTTTCTTTTTAAAGTACAAAAGACAATCAAACTTCAGCTTTTTCTTTTTTGAGTTGTGTTCTTTCTTGGATTCTGAGACTGTTAATTATCATCAGCTAACAATTTGCCATAAATAATTTTCTAAATCCAAACCAGGAAAGGATGAAGAAAATTTGAAGTTAGAACTTGGAATTACAACTTACCAACATTTTTGGCACCAAAGAAGTATCC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	321	584	1.50E-35
PF07714.20	PK_Tyr_Ser-Thr	321	585	1.90E-32
PF13855.9	LRR_8	143	182	3.90E-11
PF08263.15	LRRNT_2	29	66	4.00E-09

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.9.3:RLK-Pelle_LRR-III

Gene Ontology

GO term	Description	Category
GO:0016020	membrane	Cellular Component
GO:0050832	defense response to fungus	Biological Process
GO:0005524	ATP binding	Molecular Function
GO:0004888	transmembrane signaling receptor activity	Molecular Function
GO:0003723	RNA binding	Molecular Function

InterPro

InterPro term	Description
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0A6A5NNL7	_

SwissProt

SwissProt term	Description
Y5830_ARATH	Probable inactive receptor kinase At5g58300

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G58300	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0580028176.01.T01	_
Oryza sativa L.	LOC_Os01g60330.1	inactive receptor kinase At2g26730 precursor, putative, expressed
Cucumis sativus L.	Csa007654	_
Glycyrrhiza uralensis Fisch.	Glyur001804s00033609.1	_
Codonopsis lanceolata	Cl_chr06_31450T	_
Arachis hypogaea L.	AH17G15520.3	Probable inactive receptor kinase At5g58300 like

Expression pattern