Gene detail

Detail information of Am04G019540.1 Annotation

Gene ID	Annotation
Am04G019540.1	K-box region and MADS-box transcription factor family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G019540.1	mRNA	Chr04	124708981	124715757	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM04G019540.1
TAGCTACCACTTCCTGGTGTCGAAATATTGATCTTTCTTCTTGAATTTGCTAAGTCAAACCTTGTTGACTGCATTTAATTTTAGTCTGTCGAAAATGCAGGCTAACACCAACCCATTCTTTTCTTAAAGAGACGTTCTTTTCTTAAAGAGATATTTGATGATTAGTTTGTTATTGTTGGTAGTGATTGAGTTGATTAAATAGATAGTTGATAGTTGATGAATAGATAGTTGAAGATAGTTTTTTTTGATAAGCAATGTTAGTGGGGGTGGGGGAATGTTAGTTTCCGGTAGAGCCGTCAATTTGGCCCATATGGGCCGGCCCAGCCCCAGCCCCACGTGGCCCTAGGGCCAAAAGGCCCATGGGCCAAAAAGCCCACATTTCATAAGCCCACATGGCCCCAAGCCCCAGTGGGCCAGGGCCAGCCCCAAGGCCCTTAATTTTTTGTTTAATTTTGTGGATAGTTGTGATCCATCCGATATATTTTTTAAATCCATTGGATAATTATAAAAATACTTTTTAACAAAAAAAATAAATTTCAGTTTTTCATTTTTTTTCAAATTCAGAAACTAAATATATATATATATATATATATATATATATATATATATATTCAAGAAAAAAACATATACTAGGTAATTTTGATTTGTTGAATCACATAAAAGGATATGGTCCATATACTAGGTAATTTTGATTTGTTGAATCACATAAAAGGATATGGTCCTATTAGAGAGACAAATGCAGTTTTATTTTATACGGACCTACCATGATTGGTTGTTTGTAGAGTCCCCTACTCCCTAGCCTTGTCTTTGTCCAATGCTCATAGTCACATGAGCTAACCCTGCTCACATTTTCTGCTTGTATATTATACAAGAATGGTTTTCCACCTTGGTTTGTTATTTTGCTACGTTTGGACACGTACTTACATTAGTTTGCAGAATGACATTTTTCCATCCCAAATGAATGCAGGGGATCACAATCCCAAATTGGACTAGTAATTTCTAATTTTGCACTACTAATAATTAATTTATATTATTGTAAGATAAGATTGCTCACAAGTTATCTCCGAGCGCCGCCGTGGGCGTTGCCGGAGCGCCGCCTCCGGCCGCCATGGGGTCGCCGAAGCGCCGTCGTGGGGTAGCCGGAACTCCGCTATGGGGCTGCCGGAGAGCCGCCCTGGGGCTGCCGGAGAGCCGCCCTGGGGCTGCCGGAGAGCCGCCCGGCACCACCTCCGTATTTAAATATAAATATATATTTATATTTATATATATATATATATATATATATATATATATATATATATATATATTATAACTATTATATTATATATAACTATATATATATTATATATATTATATATATTATATTTATACATTTACAGATATTAAAAATATAAATAAAAAAATCTGAAGTATAAAAATATATTAAAATGATGTTTAAAAGTATTTTTTTAGTAAAAGATTTTTTATGTTTTAAAAATATAAAGGAGGTGGTAGTGATGGTGGTGGTGGTGAGAAGAAAAAGGAGGTGGTGGTGGTGAGAAGAAAAATGAGGTGGTGATGGTGGTGGTGAGAGTGATGGAGAAGAGGAATGGGGTAAAAGAATGAAAGAGAGGTGTAAGTAGTAGAAAAAAAATGATCAAAAAAAATTGGGGGCCAACCCACAAAGCCCTGGCCCCAACCCATTAAAAAATTTAAAATGTGGGTTGGGGCTAAAAAAAGCCCCATTAATAGGGGGCTGAAATATTTGGGGCTAAATTAGGGGGCCAATGGGGTTGGGCTTGGGGCTTGGGGCCAAATTGACACTTCTAGTTTCCGGAATTTGAACCCGAGACCTCATTCTTGCACTTTTTTTGGTGCACTCCTTCGATATCTCTTAGCTCGCCAACTGAGCTACCTACTTGGGGTAGTTAAAGATAGTTGATGATTAGTGTTTTGATTAAATAGATATTAGATAGATAAAAAAACATGAAATGTGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAATTGAGAAAAATAAGAGTGAGAGAGATGTAAAACAGTAAGTTTTAAATTTGAGATAAAAATATTTAATAGTGATGTGAGAAGGTGGGATCCAAAAAATAAAAAGTGTGATAGAAAAATTATAAATTTCCAAATTTATCCTAAAAAAGCAAAAACTTAAATGTCTAATTTAGTAATTTCACCAAACATATTCTTTTCTTAAAGAGATATTCGATTCGATTGTTGATATTTGATTGTTGTACCACTTTTTTCTCTCGTAGTGCTCTATGAATTTTGGTGTGGTCGAATAAACAATCCAACGGCAACCGATCATGTCATTGTACGGAAGCTACTAATCTTTTCAAAAGAAAGTCATTGTACGGTATATATATTTATGCTTTTTGACTATTATTGGACTTGTATTAATGCCAGCCAACAAAATATCTGACAGTGGCCTTTGGGCCCTCTCTTTCACCAAAAACAAAAAAAACAAAATATCTGACAAAATCGAAGATATCTTTTGTAGTAATAAAGAAGTACGGTCACGTTCCTTTATTTGGAAAGAAATCCCCCTTTCCTTTCCTAAAAAATTCAGCCTCACCATTCTAATCAGGTTCTTCTCCTTCTTTCCCTCTCCTTTTCTCTCTCTTTTTCATCATCACTTTGTTTAATTAGTTCAAAACCAACAAAATCATAAAAAAATCCATTCAAAATCGTAAACCAATAAGCTTCTTTTTAGTGTTTTACTTTTTAGGTTTTCTCATGTTAATTTTCCTATTGGCCAGATCTGAAACTTTCTCATTAGGGGTTTTCGCTAGTTCTTATAATTCTACTGAAACGTATAAACATATGTGCCATATGAAGGGGGGTGTATAATGAAAAAATGATTATGAACTTTGATGAATGTTTTTCTTACAGAAATTATTATTATTATTAATAGTAGTTGAAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00319.21	SRF-TF	10	57	1.30E-25
PF01486.20	K-box	88	169	1.10E-14

Gene family

Gene family	Subfamily
Transcription Factors Family	Others
Epigenetic Regulators	FLCP9

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0046983	protein dimerization activity	Molecular Function
GO:0000987	cis-regulatory region sequence-specific DNA binding	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function

InterPro

InterPro term	Description
IPR036879	Transcription factor, MADS-box superfamily
IPR002100	Transcription factor, MADS-box
IPR002487	Transcription factor, K-box
IPR033896	MADS MEF2-like

trEMBL

trEMBL term	Description
G7KBL2	_

SwissProt

SwissProt term	Description
SVP_ARATH	MADS-box protein SVP

KEGG

KO	Description	Enzyme
K09264	MADS-box transcription factor, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G22540	K-box region and MADS-box transcription factor family protein
Medicago sativa L.	MsG0580025651.01.T01	_
Oryza sativa L.	LOC_Os03g08754.1	OsMADS47 - MADS-box family gene with MIKCc type-box, expressed
Cucumis sativus L.	Csa003859	_
Glycyrrhiza uralensis Fisch.	Glyur000294s00011862.2	_
Codonopsis lanceolata	Cl_chr01_00390T	_
Arachis hypogaea L.	AH17G16710.1	MADS-box protein SVP like

Expression pattern