Gene detail

Detail information of Am04G018360.1 Annotation

Gene ID	Annotation
Am04G018360.1	AGAMOUS-like 104

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G018360.1	mRNA	Chr04	105283279	105286553	-

Sequences

CDS:

>Am04G018360.1
ATGGGTCGCGTTAAACTTGAGATAAAGAGAATAGACAACAACACAAATCGTCAAGTTACATTTTCAAAGCGTAGAAATGGACTCATCAAGAAAGCTTACGAGTTATCAATCCTTTGTGACATTGATATTGCCCTTATTATGTTTTCTCCATCAGGACGTGTTAGTCACTTTTCCGGTAGAAGAAGGATTGAGGATGTTTTTACGCGTTACATTAATCTTCCTGACCAAGAAAGAGATAACGCTGTAACTTTTCCTGAGCTACCTTATCGCAGGAATCTTCAGAACAAGGAGTTTTTGCTTAGGACGCTTCAGCAACTGAGGAGTGAAAATGACATAGCTCTACAGCTGGCCAACCCGGGAGACATTAACTCCGAGATTGAGGAACTCCAACAAGAAGTTAGTAGATTACAACAACAACTTCAAATGGCGGAGGAGCAAATAAGGATATTTGAACCCGACCCATTAAAGATTACATCTATGGGGGAGCTTGAAGCCACGGAAAAAACCCTTGTCGAAACCTTAACACGTGTCATGCAGAGAAAGGAAAATCTGCTAAACAGCCATCTATCTACGTATGATCCATCAGTTATTCCGGGAATGCCAACCTCTTTCGAAAATGTTGGTTGGCTGCAGGAAAGTAATCAGAGCCATCACCAGATTTTTGATGCATCAGCTCCTTTGGATCATCAACTCAGGGATTTGTCCTCCACGATGTACAATTCATTTCAACAAGGGACAAGTTCAAATCCTGATCACCAAGGTATGGGAGAGTGCCACGTGGCAAATCCAAACGATGGGAACCTAGCAGCATGGCCACAAGGATACACATTGTATCCCCATCATCATCAACAACAACATCAGCATCAACATCATCATATTCAACATGACATAGTGGGAACTCATCACCATCATCATCACGACATGCAAGATATGATGTCACATGGGCAAATGAACATGCCATTGCCAATCACTGCCTCACAATTGGAACCACCCAAAAATGAGTCTACAGATTATGATCAAAATAAACAAGCACAACATCATATTCATCAACAGCAGCAGCATCAGCATCATTCTCAATGA

Protein:

Promoter(3k):

>AM04G018360.1
TCTTGATCGTCTCACAAACAAGCAAAGAGTACGTCACCAAAGATGCCATGTTGTAGCTGTATCTCCCCAAAGTCAGGGATCTAATGGAGCATTTCTCGGAAGCTAACATTAAACATGTGCCTCGCAGGGAAAATGCACGAGCCGATGCTCTAGCAAAATTGGCAAGCACAAGGACAAATGGGTATCTTAGGACAGTCATTCAAGAAACTCTAGCGCAGCCGAGGGTCCAATTGAACGAACCAACTACCTCACTGGTATGTGCCATCGAAGAGGTGGCCACTTGGATAAACCCCATTACTGAGTATATACAGACTGACAACCTACCCTCTGAAGTCGTAGAAGCAACTCAAATCATAAGGAAGGCTTCTTCCTACTCCCTAATCGAGGGAAAGCTGTTCCGAAGGGGATTCTCATCACCCTAACTCAAATGCGTAGCAGGAAAAGAATGCTTGTATGTCCTAACTCAGATCCACGAAGGAATCCGTGGACAACACTTGGGAGGGAGAGCCTTAGCTAAAAAAGCCTTGCGGGCGGGATACTATTGGTCGACCATGAATGAAGATGCAATGAATTTTGTGATGAAATGCCAAAAATGTCAACGACATTCAGATGTCCACGTGGCACCCCCAGCGGAGATGACGTAGTTAACATCCACTTGGCCCTTTTCATGGTAGGGAATGGAGCTTTTGGGACCATTCCCGGTCGCTCCTGCCCAGATGAAGTATCTGATCGTGGCTGTCGACTACTCACTAAATGGATTGAAGCCGAACCCCTATCCAAAATTATGGCCAGAAATGTCATAAAATTCTTCAAGAAATCTATTATAATAAGGTTCGGAATCCCAGAAATAGTAGTAACCAGCAATGGTACTCAATTTACAGACAAGAACTTCAGAGAACTCATGACCAGCCGCTCCATCAAACAACACTTCACCTCGGTAGAGCACTCGAAAACCAACGGACAAGCAGAGTCCGCTAATAGAGTCATCCTAAAAGGGCTCAAGCGAAGACTAGACGAGACAAATGGAAATTGGGTAGAAGAGCTTCCCCATGTATTATGGGAATACAGAACCACTCCACATGCAACTACAGGAGAATCTCTGTTTCGAATTACCTACGGAACCGAGGTGGTCATTCTTGTTGAAGTGTGAGAACTCACTTGGAGAACAGCACACCCAACCAAGCCCTCAGCAAACGAGCAAGCAACCCGAGAAGAGTTGGACTTAGTAGAAGAAGTCTGAACCCAAGCTTCCTTTAAAGAAGTTGTGGTCAAGCAAAGAATAACAGCAAAATTTAACAAGAAGGTGGTCCCAAGAGAATTTGAAGTTGGCAACCTCGTTCTGAGAAGAGCTGATGTCGGCCATAAAAATGCCAGACAAGGGAAACTTGCCCCCAACTGGGAAGGACCCTACCGAGTAACCACTAAGACAGGGACCAGAGCTTACTCCCTTGAAACATTAGAGAAAGAACACATCCCAAGAACTTGGAATGCTACCAAGCTCAGAAGATATTATAGTTAAAGAAATCAGCAAACGTGTAGGCGAAATGTTATATATGAATACAATTTCAGCTTTTCGAGTCCAATAATTAAGTCCACGCTCAAAAATTTTAGGCCTACTCGGCCCCTCGGTTCAAAACCGATCTGAGCAATCTCTCGAAGGTCAGACTAAAGGGGATCGGATTAGCCTATATATAGCCTTCAAAAGCTCAAAAACTTTATTTATGCCTACTCATTCCCTCGGCTCAAAACCGACCCGAGAAATCTCTCGGAGGTCGGACCAAAGGGGATCAAAATTGGTATACATATACTCGGCCATGCAATCCTGAAAATGAATAAATTATTAATAAAACAGAGAAATGATCTTGCCACGGCAGACGAATGAATCCGAATAATGTTACAATAATATTACAAACGCAGAAAACAAGCACAGAAAATCAATAGAGGCTTTCTCAATTCTAAATAGAAGCTAAGTGACTAAATTGCTCATGTTTTATATATGATTATGCATGGAGCAGTCCTAAAACAGATTCATTGTGAATATCAGATTATTAAAACTACTAAAATCATAAAAACTATATATGAACAACAAGGAATCCTAAAACGTAAAGTTGAAAAACAAAATCCAGGGAAGAAGAAAGAATAGAAAAAATTTGTGAGAAGAATAGCTAGAAAAACTGAGAAGAAGAATGTCTTACCAAGGAAGACCAACATAAGCGGTGGAGAGCGACGATAGAGGGACTGTTAAGGCGCAAGGAATAGAGAAGAGGAATGAGGTCGTAGGTGAGCGTAGGAGGGTGGAGGAGCGCAGAGGAGGGTGCAGGAGGGCAAAGGAGACAATGTCGAGGGGGAAGAGAGAGAATAGTTAGGGTGAAATGAGAGTCGAGGGAGAAGAATCTAACTTAAGGTAACCGAAAAATTAATGTTATCGACGGATTTTTTAAAATACAGACCAATTAATGCGTCAGAACATATCGACTGGTTCGAGTTTAATAACACTGACCCAAAAAAATGTTTAAAAAATGGTGAGTACTCTGATACCCTATGATACTCATAGTTTTATCGGATATGATACAAATTACCAAACATCCTATCACATAATGATCATATATCATTTTTTTATATTTAATTATTTTAAAATAAATAAAAATTATATTTTGTCGAATATCAATATCCAACAAAACTCAAGGGTATCGAAGAATTTTACTTCAAAAACTGATGGTTTGTTTTGCTTCATAGTTCTCTAATCATCAACAAAAAAAGAGCCAAAGCATGCAGCTACGACCCTTTCCCTTATAAAAACTCATGAATCAATCTCTCCGCCTCCCTCTCTTTTCTCCTTTAACCCATTTATAACCATTCCCTTCGACCCTTTCTCTCCTATCCAACGGTTCCTCCCCTTTATAATTTTCTGATTCCAAAAATCTTAGATTTCCTCATACAGATTCTTCTGCTACGTACATTTCCATTCTTTTTCTGCATTTTGCATGATAAATCATTGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00319.21	SRF-TF	10	57	2.00E-25
PF01486.20	K-box	125	191	1.40E-06

Gene family

Gene family	Subfamily
Transcription Factors Family	Others
Epigenetic Regulators	FLCP20

Gene Ontology

GO term	Description	Category
GO:0000987	cis-regulatory region sequence-specific DNA binding	Molecular Function
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function
GO:0009555	pollen development	Biological Process
GO:0080092	regulation of pollen tube growth	Biological Process
GO:0021700	developmental maturation	Biological Process

InterPro

InterPro term	Description
IPR036879	Transcription factor, MADS-box superfamily
IPR002100	Transcription factor, MADS-box
IPR033896	MADS MEF2-like

trEMBL

trEMBL term	Description
A0A371E3B2	_

SwissProt

SwissProt term	Description
AG104_ARATH	Agamous-like MADS-box protein AGL104

KEGG

KO	Description	Enzyme
K09264	MADS-box transcription factor, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G22130	AGAMOUS-like 104
Medicago sativa L.	MsG0480022143.01.T01	_
Oryza sativa L.	LOC_Os06g11970.1	OsMADS63 - MADS-box family gene with MIKC* type-box, expressed
Cucumis sativus L.	Csa015983	_
Glycyrrhiza uralensis Fisch.	Glyur002541s00042872.1	_
Codonopsis lanceolata	Cl_chr02_43320T	_
Arachis hypogaea L.	AH08G06950.1	Agamous-like MADS-box protein AGL104 like

Expression pattern