Gene detail

Detail information of Am04G017280.1 Annotation

Gene ID	Annotation
Am04G017280.1	STT7 homolog STN7

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G017280.1	mRNA	Chr04	83717724	83721830	-

Sequences

CDS:

>Am04G017280.1
ATGGAAACTGTTACAGCTAGAGGAATAGGACTAGGAGTAACAAAACTCCACCGCTACAACCCCAATCAAAAATCTTTATTTCTTGGTCAAAGACTTAGAATCAAACCCTCAAATGAAACACCATGCAATGGAAAATTCACTCTCTCAAACCCAAAAGCCTTTCAAGTTTATGATGCAATAGGTGGTGGTGAATGGATTGACTCAGTTCATAACCTTTTTGTGGGTGTTGGTGTAGGGCTTCCATGTACTGTGATGGAGTGTGGGGATATAATTTATAGAAGCACTCTTCCTAAAAGTGGATTTACCATTACTACCCCTGGTGTTGTTCTTGCTTTAGGTGCTCTTTCTTATTTATGGGCTACTCCTGGTGTTGCTCCTGGTTTCTTTGATATGTTTGTTCTTGCTTTTGTTGAAAGGTTGTTTAGACCCACTTACAAAAAGGATGATTTTGTTATTGGGAAGAAGCTGGGGGAAGGATCATTTGGAAAGGTTTATAAAGTGACACTGGCCAACAAGCCCTCTTCAAAGGAAGGTGACTTAGTCTTGAAGAAGGCAACGGAATATGGCGCTGTAGAAATTTGGATGAATGAGCGAGTTCGAAGAGCTTGTGCAAATAGCTGTGCAGATTTTGTTTATGGCTTTCTCGAGAGATCTACAAAGAAGGAACCTGAATACTGGCTTATATGGCAATTTGAAGGGGATGCAACCTTAGCTAATCTATTGCAGAGTAGAGAGTTTCCGTATAATGTTGAGACATTGATTCTTGGCGAGGTACAAGCTTTGCCAAAAGGATTGGAAAGAGAAAGTAGAATAATTCAAACAATCATGAGACAGCTCTTGTTTGCATTGGATGGTCTTCACTCAACTGGTATTGTGCATAGGGATATGAAGCCACAGAACATTATTTTCTCTGAAGGGTCTCGTACATTCAAAATAATTGATCTTGGAGCTGCTACAGACTTGCGAGTTGGCATCAACTACATTCCTAAAGAGTTTCTTCTAGACCCAAGATATGCAGCACCGGAACAGTACATCATGAGCACACAAACTCCATCTGCACCCTCAGCTCCAGTTGCAACTGCACTTTCTCCAGTCTTATGGCAGTTGAATTCGCCTGACAGATTTGACATCTACAGTACTGGTCTAATATTTCTCCAAATGGCATTCCCTAGTTTACGCACCGATAATAGCCTCATACAATTCAACCGTCAATTAAAGCGGTGCGACTATGACTTGGTTGCATGGAGAAAAAGTGTAGAGCCTCGATGCGGCCCTGATCTTAGGAGGGGTTTCGAGCTGTTGGATTTAGATGGTGGAGTAGGATGGGAACTTCTGACATCAATGGTTCGATACAAAGCAAGGCAAAGACTGAGTGCAAAAGCAGCGTTAGCTCATCCTTACTTTGCCAGAGAAGGCTTGTTGGCATTGTCTTTTTTGCAAAATCTTAGGTTGCGGCTTTTAAGAACAACTCAGCAGGATTATGGAGAAGCTGCCAATTGGATTGTTCAGCTTATGGCTAAATCAGGAACAGAGAAGGATGGTGGATTTACTGAAGCTCAGCTCCAGGAACTTAGAGATATTAAGCCCATGAAAAAGGCTAGTGCACAGAGAAATGCTCTAGCTTCAGCTCTTAAAGTTCAGAGGAAAATTATAAAAACTTTAAATGAGAGTATGGATGAGCTCACTGGAAGCAGGAAAAGCATTTGGTGGAGCAAATGGATCCCAAGAGAGGAATGA

Protein:

Promoter(3k):

>AM04G017280.1
GTGTCTTTTTATATATTTGTGTAGTTATCCCGTGTGTTTTTATATATCATTGCAGTTATCTCATAGTTTCAATTGATTATTTGAGTTGATTAGTAGATTATAATAGATTATTGCAGTTATCCCGTGTTTTTATATTAGATTATTTGAGTTAATTAGTAGATTATAGTAGATTATTGCAGTTATCACATGTTTTTTTAGATAGTAGTTTTATAGTAGTTTTCCAAAATTATAATTATCAGTGGTAACTATTAATTATAAATTGTCAAAAAAAAATTATAAATATCAATGGTAAATATTAATCCCGTGTTTTTTTATATATCACTGCAGTTATCCCGTGTTTTTTATTTATCAGTGCAGTTATCTTGTAGTTTCAATTGATTATTTTAGTTGATTAGTAGATAATAAAAGTTAGATATTAGATTATCAATAAGAGATATGTGATCCCAAGTAGGTAGCTCAGTTGGCGAGCTAAGGGATATCGAAGGAGTGCACCAAAAGAGTGCAAGAAGGAGGTCCCGGGTTCCAACCCCGGAAACTAACATTCCCCTACCCCCACTAACATTGCTTATAAAAAAAAATAAGAGATATTTGTTTTAAATATTCATTACTAATTTAAATAGTCATTAAGTCTGTTTATAGTAGTAGTCTTCACAATTTTTAATTAAAGTAGTGTTTGTATAAATTTAGAAATTTAGTTAAAAGAATTAAAGTGAAGTGATAAGAAAAAGAAAATAATTATTTATGGGAAAAGTAAAGTAAAAAGAAAGACAGCGTAAAAGAAAAGTGAAAAGGAGGAAAGAGAGAGTAAGAAAAAAAGAGAAAAAAGGAAGAAAGAGAGTGTAAGAGAAAAGTGAAAAGTAAGAAAGAGAATGTAAGAATAAAGAGAAATAAAAAGAAAAAAATAGAGTGTAATGACATTTTTACCTTCAAAAATTTGAAGTGTCTTTTAGATAGAATGGGCGTATTGGTAAAATCATATGTGGTGGATTTGTATAAATCTATAGTAGATATACTGAGGTGTCAAATATTTGTCCTACATGGATTTTCCATTTCATATTTGTCCTTCATCACTCACCGACACTTGTACACCGTCAATCTTAGAGGTGGTCATCCATGGCTCAGAATCTCAGATTGCACAAATACTTTCCCTCCGCCATTAACATTCCATTTTTGCATTTTCATACATGCTTGCACCGTTCCAGTTTTTTTGGTTTCATACACTGCGGACTACAGTACTGCAACTGTGTATCACTATATCAGTATTGTTAAATGGTGAGAAGAGATCCCCGGAAGGTCAACACCCAGATAGGAGGAAGAGGAGTAGTGAGGTCAAGAAAAATTGTTTTTACCGGCCATGACTTTTCGGCGGATTGACATCTGCCAAAAAATTTCCTGCGGATTTTAGGATTTACCGGCGGATTTTGTCCGCCGAAACATTACCGGCGGATTTGTTAGTTTTTCCAGCGGATTTACCGGCGGAATTTTAGGTATTTCCGGCGGATTTTAGTCTACGAAAAAAAAAATTTAAAAAGCATCCGCCGGTAAGGTATTTTTTGGCGGATTTTTTTTGAAAAAAGCGCGGGGTAAATCTGCCGGAAACGTCATTTCCGGTGGATTTTTAAGTATTTCCGGCAGATTTTTAGGTATTTCCGGCGGATTTGGGTCTACGAAAACATCCGCCGGAAATACCTAAAAATCTGCCGGAGATGACGAACCGTCTAAAACCCGCCTGAAACGTCATTTTCGGCGGATTTTTTGATAAGAGCGGAGAATTTGATTTTTGAAAATTCGCCGGAAACCCCCTAAATCTGTCGGTAAGTGACATTTCCGGCGGATTCTCCTTTTGACCGTTGGACTTCGGTTCTTCTATATAATCCCTTCTCCATTCTCCACTTCTTCTTCACACCTCTATCAATACTCTCATTCTCTCTACTAAATCTCTTCTTGAAACCTCTCTTCCTCTCTCTACTAAATCTCTTCCTCTCTTTGGCAAAATTCTTTGATCTAAGCCATACCAGCAGCCCCAGCAGCAGTCACCCCACCAGCCAAACCGGCCAAACCAGCACCCCCAGCGGCGGTCACCCCAGCAGCCCAACATCGATCTTAATAATATCGATTCGATTAGTCATTTTCTTGCATCTGATGATACCTATTATCAGGGTGATGAGTCAGACCAGCAGCTTTGCATCTGATAATATTAATTTTTTAAATAAAAAATAATAATTTTTATTTTTAAAAAATAATTAATTTTAAAAAAAAAAACGGTTTTTTCGGCGGATTTATGGACTTTCCGGCGGATAAATTCATACGAATTTTTTTTGGATTTTCCGGCAGATTATCCGTCGGAAATTTCCGGCGGATGTTTCGGCGCCACGAAATCCGCCGGAAATTTCCGGCGGATAATCCGCCGGAAACCGTTTCCTGCGAGCTGGCTACCGGCGCCAAAAATCCGCCAAAAAGTCCACATTTTCGGCGGATATTTGGCTTTTCCGGCGGATTTTGCCTGCCGAAAAGTACAATTTTTCTTGTAAAGGGTGTTATTTCAATTCCACATTTAAAATAAATGGAAATGACAAAATATGACATGGAAAATCTATGTAGGACAAATATTTGACACCTCAGTATATTACTAACGGAGTTAGTAACAGAAGGACTAAAATGAAAAAGATGATATTTGTAGAGACTTATTTAAAAAAAAGTTTTTACGGGAACTAAAACCAAATGACCCTATATTTGCCGGAAAACATATTTAAATTTTTTTTTACAAGAAAATGCTCTAAATAGTTAATTGGTATTCCAACACGGAACCAGCAGTATCTACGTGTTCATTTGTGTGGCATATATCAAGCTTCAATTCAATTTTAATATTAAGACCTCCAAACTCCAAACTCTCTACATCCACAAAAAAGAGTTAGTGGTCTAAAATTGAAGTACTAGATATGAGGTAAACTTCACTTCACAAACTTTTTCTCTCACAAACCAAACCCAAACCTCACTAAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	151	343	2.20E-24
PF07714.20	PK_Tyr_Ser-Thr	152	343	6.40E-11

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.5.4:Group-Pl-4

Gene Ontology

GO term	Description	Category
GO:0042651	thylakoid membrane	Cellular Component
GO:0042548	regulation of photosynthesis, light reaction	Biological Process
GO:0009507	chloroplast	Cellular Component
GO:0007623	circadian rhythm	Biological Process
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
A0A8B8M2Y5	_

SwissProt

SwissProt term	Description
STT7_ARATH	Serine/threonine-protein kinase STN7, chloroplastic

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G68830	STT7 homolog STN7
Medicago sativa L.	MsG0580027254.01.T01	_
Oryza sativa L.	LOC_Os05g47560.1	serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed
Cucumis sativus L.	Csa012585	_
Glycyrrhiza uralensis Fisch.	Glyur001726s00035056.1	_
Codonopsis lanceolata	Cl_chr01_38910T	_
Arachis hypogaea L.	AH15G19430.1	Serine/threonine-protein kinase STN7, chloroplastic like

Expression pattern