Gene detail

Detail information of Am04G017230.1 Annotation

Gene ID	Annotation
Am04G017230.1	Protein kinase superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G017230.1	mRNA	Chr04	83345305	83349501	-

Sequences

CDS:

>Am04G017230.1
ATGGCTGCACACTTTGTGTTCAGGTTGAGGTTTCTTCTTTTCTTATTATTCTGTTATTTTCAGCTTCTTCATCTCTTGGCTGCAACAAAAGAGGTTTGCGAAAGAGCAAAGTGTGGATATCTTGGAGAAATCTCGTTCCCCTTCCGCACAACCGAAAATGATACAAAATGTGGCTTTTATTTCATAAGTGGCTGCGAAAACAACAGTAGAGTGAAAGAAATCCATCTAAGAAACAAAACCTTCCAAATTGATAGCATCGTTTATAACCACAATTCAATTTTAATCTATGGCCCTGAAATTAATTTAAATTCCATTGAGAGTTTGCCTCCTCGGCTTAAGCTTAACAATATTTCCTTTTATAGTTGTAGTCATAATATTAACAGGAGTCTGACTTATGCTACTAAGCTACCAGGGAAAAACATAACTTCAGTTAGTTTATCTATTGGACTGGCAACAGTTATCACGACTGTATTGTTTGTTGTTATTCTATGCAATAGAACAATCAAACCTTTAAACGTAGGTGTCCAAAATCAATCAAGAACCACTACTTATCAAGGTTTGGGTCTCTCAAGAAATATAACAAACCCAGAAGGTGGAGCTGTCTACTTTGGGATCCCTGTTTTCTCATATGAGGAGCTTCGAGAGGCAACAAACAATTTTGATCAAGCTAGACAGCTTGGAGATGGAGGCTTCGGCACTGTTTACTACGGAAAGCTTAGAGATGGACGTGAAGTTGCGGTGAAGCGCCTATTCGAGCGAAACTACAGGCCAGTGGAATCATTCACGAATGAAATTCAGATCCTAACACGCATGCGCCATGGAAATCTCGTGTCCCTCTTTGGTTGTACTTCACGACACAGTCGCGAGTTGTTGCTGGTATACGAATATGTCCCAAATGGCACGGTCGGTGGCCATCTCCACCGCGATGATGAAGCTACGAAACATGACTCAATGCCATGGCATGTAAGAATGAAAATAGCCATAGAGACTGCTTGTGCACTAACTTATCTCCATGCTTCTGATGTCATCCACCGTGACGTGAAATCCAACAACATTCTCCTTGACAACAATTTTGGTGTTAAGGTTGCGGATTTTGGGCTTTCAAGATTGTTCCCAAATGATGTCACACATGTATCCACAGCACCAAGGGGAACACCAGGTTATGTTGACCCAGATTATCGCGTATGTTACCAGCTTACAACCAAGAGTGATGTCTATAGCTTTGGTGTTGTTCTTGTTGAGCTAATATCGTCTTTGCCAGCAGTTGATTTAACAAGGGAAAGGGATGAGATTAACTTGGCAAAATTTGCAGTAAGAAAGATCCAAACAAGGGCATTTGATGAGTTGATTGATCCTTCCCTTGGTTTTCAGTCAGACGAGAGTTTGAAAAGGGTGATAATTTTAGTAGCCGAATTGGCTTTTCAGTGTTTGCAAGGGGACAAGGAAATGAGACCCTCTATGGGTGAAGTGTTAGAGGAGCTGAAGAGAATTGAAAGTAGGAAGCATGACCCAGGGACTGTTGCTGTTGTAATGAGCATTGAAGAGTGA

Protein:

Promoter(3k):

>AM04G017230.1
GAAAAAGACAGGTTAAAAAGAGATGAGAGCTTTAGGTATCAATTCTATCCAGTAACTGAAATCTAACAGCAAGTCAACAAGTTCTAATCATCTAATGTATCTACCTAATAAACCCTAAAATTTAAATAGGGACCAAAAGACAAAATTACCAAATGTGTAAGCATAAATATATTTAACCCTATAAGAATCGTAAAGAGATAAACACCTATAAACAGTAGACAGAAACAGAGTGAACGAAATATAGAGAAGAGGCAAAATGAAATAGGAAAAGTGAAGAAGCAGTTTCTTTAGTAGATGGAAAGACATGCTCACGTCGTTAAGAAGCAGCAACAGTAGCTTGAGGCGCGCGTCCTGAAGAAGAGGCAGCAGGAAGCAAAGCGCAACACCTGTTCCTTTCGTTTGCAGAAATGATAAGCCAGCAATCTTTAGTCTGATTGTGCTTTGCCACCTCATCGAAAGAGTGAAGCTTTGGATCTGAAGCCATTTTAATTTTTCACTGCACAAAATCAAAAAACCCAGAATAATTCAAGTCAAACCCCTAATTTTATTTTTCTTGAACTATGAAGAAACAGAGAATCTAAGGAATCAAGAAAAAAGAAAGGGAAAAAGAAGCATCAAATCATCACATGAGAGAATTGACAAAAAAAGCAAAATGAAATTCTTATCAATGAAAAGGGCTATGAAATTAGGAACGAATCGACATCAAAAAGTAGTGAAAAGGAGATTATTGAGTTGGGGAGGGGTCAACAACACTCACCACGATGGCTCCTTCCCAGATTTTCAGTGACAGTCTCGTGTTGTGTCAAATCGCGTAATCCAAGCTTTGAAATGATGGCGGCAACGTAAGGGTTTGGGCGCTAATAGGAAAGAACAGTAGTGAAACTAGAGAGAATGAGGAGGAGAGCGACTTTGGTGAGTGACTCAGTGAAAGAAAGGGAGAAAGGCGCAGCAGAGGGAGAGAGAAAGAAAGGGAATATGTTGATTGAGTGAGAAAAAAGAGAGGAAGAGTTAGGGTTTCTTGATAAAAAGAAATTTAGAGTCGGCCACTCCGACGCTAAGTATATCATTTTAAAAAAGCAAAACATTAGCGTCCGCTTTGTTACGGGTAGCGTGGGCCATCTCCGACGCTAAGTTTTATTTGTAAAGGTCAAACAAATTCGTAGTGAAGCGTGGGTTGGGCCGACGCTAATCCGACGCTAATAGCGTCGGTATCGGGGCCGACGCTAATAAATGGACGCTAATTTGCTCTTTTCTAGTAGTGACTTTTAATGAAATCTCAGTTAGTCCCTCCAGCCGTACCTCCCAATAAATATACTCATGAGATCTTTTAGTTAACTTTTACCCACGACGTCTTCCCCAAAGAGATGCAGTCTTACATAAATATAAATACTATAATCCCCACGAAGCGGGAAACCCTAACTCGAACATATTATCTGAGTTCCAACATGAGAGTCTTGGACAGAGATGATGACTTCCCCACCCAAGTGCGCCACATAATTCTTTAGTTCATTATGTATGTATGTATGTATGTATGTCCTCATCCTCGATGAACAGAGAGTTCAAAGCTCAATCATATCATAAATGAGTCATACAAGGGTTTAATCTTAGGGGAAGTAATGTTAATTGAGTTGGAGAGCAAGTTGGAATGGAATTGGTACGCTTAGAAGTGAGAAAACCAATATGATATAGCACAAGTGGTAGATACTTGGGCTCCTTAACCATTTGGTCACGGGTTCGATCATTGGCTGGTGTGTATGGAAAAATACCTAGTGGGAGAGGTCAACCCCTTAAATGGATCTCAGTACCTCGAGGGATTAGTCTATACAGTTGTGCAGGGGATACCTTGGTTTATCAAAAAAAGAAGTGAGAAATTTAAATTTTTAAAGTGCTGGAAACGCTTGGGCGCACGGGTTGTGTGCTAGGGTGCATGACCCATGTCTACCAATTTCAAAGGATGAACCCAGTACCCCGAATAGGCGCACCAGTCATGCGCTGGGGCGCACGGACCGTGTGTCCTTCGCAGCAACAGCGTTTCACATTTTTAATTAGTATTGAATCTTCCAATGGTACCAATCCTTTCCAAAAACCACGTTTAACGTTAAATACATTAATTACCATATGATTAAACAATAGAATTCAACAATAATCGTGTTCCACAATAAACAATTTCCAAACACTATACAAATCAACATGCATTATCAAATTCATAACAATTTGAGTCCAGTGCACACATAGTTTCAGAAAAACAGAGTTTAAACTTATGAAAAAGTTTAAAACCCACAAATTCAATTAGGTTTCAAGTACCCAAGTACTCAACCTCAATCAAAATCAAATTTGGTTTTATTTACTGGGTAAGAACTTTTGCAAAGCCAATGGCCAAGTACACGTGGCTAGCTAATTTCCTCGACGTAGATTAGTCACCTGCAAAACCAGTGAATATTGTGCACCAATAACACGGCACCCAAAAAAACACGATAGGCCAATTAGAATTTGTTAATATTTGTTTATCTATTTATATGAAATATACGGTTGAATTTTGAATAAAATTTTGTATGTGTCTTTGGTTCCTTGGGGCGTTTTTTCCATAGCGCTCGACCTAGACTTATCAACTAGAAACTCTATAGCTGGCTATGGAATATTCACGACTTATCGGCCGGGGTCTTTCATCCCAGAATAGGGTTCAAGGACGCCGCGATTTAGAGTGAAAGACCTGATCGAGGATGGAGATCCAAAAATGACCAGTTAGTAAAAACAAAGTGAGGCCTTCAAAGTCAAGTAAAATGGGGTCACTCGTGTTTTTTGGGTTGAAGAATTATTGAAATTCTCATTGCTCTGTTTCGTACCAATTTCTCAAGTCTTGCTTAGTCATTTGTCCAAGTCAAGTCAACTACCGTAATGCACACACACACACAACTAACTAACACTACTATATTATGAAAAGCAGATGATAAGTTAGACAAAATTATTTTTATGATTTAATATTAATAGTGTCATTCCAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	221	492	4.30E-44
PF07714.20	PK_Tyr_Ser-Thr	223	494	3.20E-43
PF13947.9	GUB_WAK_bind	33	95	4.40E-06

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.5.2:RLK-Pelle_WAK_LRK10L-1

Gene Ontology

GO term	Description	Category
GO:0007166	cell surface receptor signaling pathway	Biological Process
GO:0071944	cell periphery	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0030247	polysaccharide binding	Molecular Function
GO:0046872	metal ion binding	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR044652	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1/1.2/1.3/1.4/1.5

trEMBL

trEMBL term	Description
A0AAN9SZA4	_

SwissProt

SwissProt term	Description
LRL11_ARATH	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G25390	Protein kinase superfamily protein
Medicago sativa L.	MsG0580027348.01.T01	_
Oryza sativa L.	LOC_Os01g49529.3	OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed
Cucumis sativus L.	Csa004470	_
Glycyrrhiza uralensis Fisch.	Glyur000024s00006595.1	_
Codonopsis lanceolata	Cl_chr01_63450T	_
Arachis hypogaea L.	AH15G20340.2	Uncharacterized protein like

Expression pattern