Gene detail

Detail information of Am04G016830.1 Annotation

Gene ID	Annotation
Am04G016830.1	proline extensin-like receptor kinase 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G016830.1	mRNA	Chr04	79906261	79910823	+

Sequences

CDS:

>Am04G016830.1
ATGTCCGCGGTGACGCCCTCTCCGGCGCCACCGCTACTATCACCTTCCTCTAATAACATTCAACCGCCGTCTTCCTCCACCACTCCTCCGCCACAACAATCCTCAGCAAATACACCTCAACCACCATCCTTCATCACCTCTCCTCCGCTGAAACAACCTTCCTCCCCTCCACCTAACAGTTCGCTATCACCGCCTCCGGCAACATCACCACCTCCGCCCACCCGATTAGCTCCTCCACCCACAGTGCCTTCTACCCCTCCACCGTCTCAATTGGCTCCTCCACCCACAGTGCCTTCGGTTCCTCCACCGTCTCAATTAGCTCCACCACCCACAGTGCCTTCGGTTCCTCCACCGTCTCAACTGGCTCCTCCGCTCTCACAATCGCCTCCATTGTCTCCTCCCGTAGCTTCCCCTCCAACCTCCCCATCACGTCCTCCTCCACCACCACCACCAACTACTCCAGCTCGTCGCTCACCGCCACCTCAATCATCGGTTCCACCAAGAAGCTCTCCTCCTCCATCACCGCCACCACCGTTCACTCCACCTCCGTCAAACCCAGCTCCTCCACTGGCATCACCTCCCGGAGAAAATTCACCTCCTCCAGCCGCCGTGCCGCCACCCCGACGTTCACCTCCTCCACCCCCTAGAAACTCAACTTCAACTCCACCACGAGCATCACCGCCAGTGGCCGTGTCACCACCACCACCACCACCACTTTTTACGCCACCACCACTTTCTACGCCACCATCATCAACCCCTCCTCCAACAAATAGTCCTCCAAGTCCAACCACACCTAGTTCTCAACCTGCTCCACCTTCAAAATCTACACCTAGTTCCCAATCGGCACCTCCACCTCTTCCGCGCTCCCTTCCTTCACCGCCACCACCCCAGAACAGATCGGAAAACTCGAGTCCTGAATCGGAAAGCAGTGGTGGAATTGGTACTGGTGCTGTAGTTGCTATCGCTGTGTGTGGTGGAATTCTGTTGCTTGGCTTCATTGGAGTTGCTCTATGGTGCTTGAAGAGGCATAAAAGAAGGAACCCTCCTAATGATGGTTATGTTATGCCATTCACTCTTCCATCCTCAACTGAATCAGAATCATCCTTTTTGAACAAACTTTCCTCTGCACCTTTGATAAAAAGCAACTCTGGCAGTGAAGTTGTGTATACACCATCTGATACTGGGGGAATGGGTCATTCAAGGAACTGGTTTTCATATGAGGAACTAATCAAGGCAACAAATGGATTCTCAACTCAAAATATTTTGGGTGAGGGTGGATTTGGTTTTGTGTATAAAGGATGTTTACCAGATGGGAGAGAGATAGCAGTTAAACAGCTGAGAATTGGCGGAGCTCAAGGGGAGAAAGAGTTCAAAGCTGAAGTCGAAATTATTAGTCGCATACATCATCGCCATTTGGTTTCTTTAGTCGGATACTGCATTCAAGATAACAGAAGACTACTTGTCTATGATTATGTACCTAACAATACCCTTCATTTTCATCTACATGGGGAAGGTCAACCTGTGCTAGAATGGCCAAACCGTGTTAAAATTGCAGCTGGTGCAGCTCGAGGAATTGCTTATCTACATGAAGACTGCAATCCTAGGATTATACACAGGGATATCAAGCCATCAAATATTCTTTTGGATTACAACTATGAAGCTAGGGTCGCAGATTTTGGCTTAGCGAAGTTGGTTCTCGATACATATACACCTATAACCACACGTGTTATGGGAACTTTTGGGTATGTTGCCCCTGAATATGCGTCAAGTGGCAAATTGACTGAGAAATCTGATGTATATTCTTTTGGAGTTGTGCTTTTGGAGCTCATTACCGGACGGAAGCCAATAGATGAATCTCAATCTTTGGAAGATGAGTGTCTAGTTGAATGGGCTCGACCTTTGCTGAGTGATGCACTTGAAACTCAGAAATTTGAGAGTTTGGTAGATCCAAAGCTAGAAAAGAACTATGTTGAGAGTGAAATGTTTTGCATGATTCAACTTGCCGCTGTTTGTGTGCGGCATTCCGCTTCAAAGAGACCTTGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGCTGCTTCAGATCTAACAAACGGAATGCGAGTTGGGGAAAGTCAGGCGCTTAACTCTACACAGCAAGCTCAACAAAGATGGTTTCAGAGAGCGGCAGTTGGTAGCTTTAGCACTGACTTCTTCAGCCAGGAAAGTTTAAATACTTAA

Protein:

Promoter(3k):

>AM04G016830.1
AGTCTCTTTCTTTTCTCTAGTCTATTGCTTTTGAAACTCCCTCTATGTCTGCCCAATTTTTTCATATATGTTGTAACCTCCCTATTTTTGATACATTGTTATTAGGATTATGTTTTAATAAAAGGTATTTTATTAGTATGTTTAATAGATCTCTTGGATTTAAGATTCAGTGAAAAATTAGAGTCTTTGAGAAAAGGAGACCGTTAAGTGAGTGATGTTCACCAAGCAAGAGTTGCTTTCCAGCACCTGCTGACAAAAATGAAACGTGGCATGCCAAGGTGAGGAAATGAAGGCACTGACTTTCACTAAGCAAGTTATAGACTGGAAGACCTACATAGGGTAAAGTGACGTGGCAAGATGAGATGCAAAGAAACTAAGGTGGTGAAGAGGTCGTTTCTCTCTAACCAAATAGGGCTCACTCAGCAAAACCCAAAATTTAGTCCTATAAATAGAAGCAATTGTAGAGGGTGAATTCACAATTCATCTCTCTCTCTCACACACACACACACACACACTCACTCTCTCTTTCTCGTTATTTTCTCTCTCTAGAAGTGTATTGTGTAAGTTCTTGGTTTTGGACCAGATTCAGGTGTGTTCGGTTCATGTGGTGCAAGTTAAGGTTCCTACTGCAGAAGCGCTACCAGATCAACTACATGTGGGGGGGAAGTGAAAGGATAGAAAGTGATAGGAAATAAAGTAAAAGGAAATAAAGTGAGTAGAAAACAAGAGGAAACTGAGATGATTCTTTGGTTGTTTGGTTTGAGTAAAAGTGAAAGGAAAATGAGAGGAAAGAAAGATATAAGCTTAATAAATGATAAGAATATGCTTTTATAGTGTGTGTCTATATATATATATATATAGAAATATAAATTTATATATTATTAGTATAACCATAAATATTAAAGATTAGCACTAAAAGAATACATATTAACTTATGTATATTAATATATATTTAAAAGTATAAATATATAAATATTCTCTTGTAGAATAATTCGTTGAACTGTATATTCATTGGAATGTCAAACTATTAATATTAATATTAATATTAATATTAGTATAAGTATGAAACAATAAACTATGTTGAATAATGTTTTTTTTACATACATGTATGTTGAAGAATGTTAATATGAACCAACAATGTAATATGTTGTTTTTGTATTGTGTTGAATATATACTAGCCGACAGTAAAAAACTAAAAACCACAAAGCAAAGTAGGGATATATTTGACATTTCACTCAAAAGTTGCTTTTCCATGCACTTTCTTCCCAAATCAAGGGGAAACAAATTTGAGCATGGGTCCCACCAAAATTTTTCTTTCCTTCTTCTTTCAATGGTGAACCAAACAAAGGAAGCCATATTTCAAGAAACTTTCATTCCTTTGGGCTTTCTTTCCTTCTATTTTCATGGGAATCAAACATAGTGTAACACTATGTTTACTACTCCTTGAGCCAAGAAACAAATGGTCATTAGTAACGACAGATTACGTTAATTGGAACTATTAGTCTGTATTGCAGATGGTATCTTACCGTGACCATTTTAATACATAATTTTATCCTAGTTCACTGCATCAACGAAAATGTAGCATAAATAAAAAACAATATCTAGCATGCAAAACAAAAACAATATCTAACGCTTTTCGAATATGAAGACAAAATCGACATTTAGGAGAGGTGGGTCATTTTTTTTAACTTTGTTTCACGTATGTATTTTTTCCATTATATATTGACCTTTGATCACGATAGACAGATAGATACATAATTCTTCTTTTTTATTTTTTTACAAAAGATAGATACATAATATAAACTTTGCAAGTTATGATATATATGATATATGTTAGAAAAAGAAAATGGTGGGATAAATAGAACGCGGAACGAAACCCATACGTTGCGTCTTGGCACCTTCATTTAAAATTGTTTTCTCTCACATTCCTTTTGCATCCATTAAGTGCGACTTAATTTGTTTATTTGTAATGTTCGCAATAATTTAATGTCAAAGTTTGAACATAATTTACGTTATAAACTATAATTGGAAAGATGGAAAAGTCTTGTCTTGCCAATAAACCATAACATTGGTTGACGCGTCTGTTTGAAAGCTTTTGGATAAAATTCTTTATGTAATCAATTATTTTTGCTTTTTAAAATAAATTAAAAATATTTTATGAACATATTAAGATTATTTCAATTTTGAATATGTCAAAACTTTTAAAATAAAAAAATATTTATCTTATGAATAATATTAATATATATGAAAAAAAATTGATTGAAAAATTCAATTGTGAGGTTTTTGTCTCAGTCAAAAAAAGTTGTGAGGTTTTGTCAAAAAAAAAAATTGTGAGAGTAGCATTGTTTTGGAACTGGACCCCACAATCCGTGTAACCGTGTTTGTGAATGAGAGAAGCTTAAGCAGAGAGAGAGAAGACACTCCTCTCCATCAAAATCAAACAAACAAGTTCAACAGAGAGTAAAAAGAATCACGTTAAAGTGGGACAACTATTCATTCAAAAACAAAACACAAGGAAGCGTACATTAAAGTTAGTGGTGATCAGATGAATATCATCAAAGTGCTATATCACATGCTTGTTTCTAACGAATATTCTGAAACACTCTTTGTATCAGCAAAATCGGACAACACTACAATCTTCATAGATTGCATGTGAAGGCTTAAAAAGTGGAATTTTGGAATCAAGGTTTTTCATTAATTGTTGTTGGCGATCAGGATTTTAGTTTGTACTGAAACTTGAGACATTGATTTGGGTTGGTAAAGTTTGGCTGGCGTGTGACAGAAGCTTTGTTTTGTTTTGTATTTCATTTTAAGGTTTATGATAGATATGTCATGAATTTGGATCTTCAACACAGAGATTGAGACCTTAAAACCATAGTATGATTATAATATGTATATTACGGTAAGTTTTCTAGTTGCGTGATTTACACGTGAACGTGATCGTGACATGTGAGTTTCAACTATAAACAACATTCCTTCTTGATTTTATTCTTTTCCAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	417	686	2.40E-46
PF07714.20	PK_Tyr_Ser-Thr	418	687	2.80E-43

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.6.2:RLK-Pelle_PERK-1

Gene Ontology

GO term	Description	Category
GO:0004672	protein kinase activity	Molecular Function
GO:0005886	plasma membrane	Cellular Component
GO:0007178	cell surface receptor protein serine/threonine kinase signaling pathway	Biological Process
GO:0005524	ATP binding	Molecular Function
GO:0004888	transmembrane signaling receptor activity	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR047117	Proline-rich receptor-like protein kinase PERK1-13-like

trEMBL

trEMBL term	Description
A0A1S2XJI7	_

SwissProt

SwissProt term	Description
PERK1_ARATH	Proline-rich receptor-like protein kinase PERK1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G24550	proline extensin-like receptor kinase 1
Medicago sativa L.	MsG0580027238.01.T01	_
Oryza sativa L.	LOC_Os05g01040.1	serine/threonine-protein kinase, putative, expressed
Cucumis sativus L.	Csa019555	_
Glycyrrhiza uralensis Fisch.	Glyur000039s00004186.2	_
Codonopsis lanceolata	Cl_chr03_36360T	_
Arachis hypogaea L.	AH05G33440.1	Proline-rich receptor-like protein kinase PERK9 like

Expression pattern