Gene detail

Detail information of Am04G015540.1 Annotation

Gene ID	Annotation
Am04G015540.1	Protein kinase superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G015540.1	mRNA	Chr04	62512538	62532171	+

Sequences

CDS:

>Am04G015540.1
ATGGATCGGAGCTCTTTCTCCCCGGGAACACGGAGAACCCGACCCAAATCTGAGATATACTCTACCTTCGTGGTTCACGACGACGAAGATGACGACAACGGAGAAACCAGCCGGCGGTGGAAAGCCGGAAGCTCCGAAACCCAGGACGATCCATACGCGACAATGTTGTACAAAGACAACGGCCACGATGACGACGAAGATGATGAAGACTCCTCTCTCCCTCCGCTCCTCAAGCGTCTCCCCAAAGACTTTGGCGGCGGATCGTCGATGGACTACGACAATGATGACAACGACGCCGGCGATTTCGGCACTGTGATCGTGAAGTCCGATCGGAGCCGGCAGCGGGATCGGCCTCCTTCTGGCATAGCTTCACCGGCAGGCTCAACTTGGAGGGCTGGGAGTTCTTCTCAGGCTAGTACTTTTAACAGGCACGGCGGGGACGATAACGACGACGATGGCGGAGGGTTTTCAACCTTCGTCGTGCGTTCCACGGTGAAGTCCGGAGAGAGAGAGTCCGTAAGCGGAACTGTGGTGCGGCGTACGGGCGGTGGCGGCGTAGGTTCAACGATGGAGAGAGCTGTGGCTAGCATGCAGGCGGCTGGAGAGTTTGGATTCGGGAAGCAGAGGAAGGGAAGCGTATCCTCGCAAAACGAGGAGGGAAAACAGCAATCGATAACCACCAAGGTTTCTACGAGTTCGATCCCTGACAGTGTTACCAGAGAGGACCCTACCACTAAGTACGAATTGCTCAATGAACTTGGGAAGGGATCTTATGGTGCTGTTTACAAAGCGAGGGATTTAAGAACTTCTGAGATGGTTGCTATCAAAGTCATATCCTTATCTGAAGGGGAGGAGGGGTATGAGGAAATTCGTGGCGAGATTGAGATGTTACAGCAATGCAATCATCCTAATGTTGTCCGTTATCTTGGAAGCTATCAAGGAGAGGAGTATCTTTGGATAGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATCTGATGAATGTGACTGATGAATCACTGGATGAGGGTCAAATAGCATATATCTGTAGAGAAGCACTGAAGGGACTTGAATATTTACACTCAATTTTTAAAGTCCATAGAGACATCAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTTAAACTAGGAGATTTTGGTGTTGCTGCGCAGCTTACAAGGACAATGTCAAAGCGCAATACGTTCATTGGAACCCCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTGGATGTTTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCCGAGGGTGTTCCTCCAAGATCAGATGTGCATCCGATGAGGGTTTTATTCATGATATCCATCGAACCAGCTCCAATGCTTGAGGATAAAGAAAAATGGTCTCTATATTTCCATGATTTTGTTGCAAAGTGTCTGACCAAAGAACCTCGTCTCCGCCCTCCTGCATCTGAGATGTTGAAGCACAAATTCTTTGAAAAGTGGAAAAGTGGATCTGCTGCAATGTTGCCCAAGCTTGAAAAGGCAAGGCAAATGAGGGCTTCAATGGCTTTGCAGGTGCAAACTCATGCGCCTGCTGCATCAGGAAATCGGGAGACAATGATAGCTTCCCAACTAAATGACGAATATGGAGATACTGTTCCATCGAGACTTCAAAACATCGGCATTGAAGGGGCTTCCGATCTCTCATCACATGGAACTATGAGGAAGCTTCACAAGGTAGAAGATGTGGACACAAGTGAAGGGAACTTTGGTACTGTAATAATCCATGGAGATGAGCTACATAAGACCACACAGGACGCAGATTCTGCAGTTTATTTATCTGCTGGTCTCACCAGCAGCACAGGAGGAAGATTATCTGATCCTGGGGTTGACAGTCAAAAAGTTTGTGATGCAAACACATCCCCTTTTAGAGGATTGAGTCCTACTACTGATACCATACAATCGCCTGTCAGTAATTCAACTGAGCAGGACATCAAAACGAAAGGTAGTCATCGAGCTCAAGCTGGAATTGGTGGTGATATAAGGAATAGCACATTGAAGAATGAAACAGTGAGCCACAAATCATTTGCTTTACAAGATAAGCTTTGGTCCATTTATGCTGCTGGTAATACAGTACCCATTCCATTCTTAAGGGCAACAGATATATCACCTATTGCTCTCCTTTCAGACAATGTGCTTGGCACCATGCAACAGGATACCAATGGAACTGGAACAGTAGAAGCATTGCAAGAACTTTTTAGTGGTGATGGACAGTCCAAAAAGGGTCGGAGAGGATTAAATGAGATGCCACTTCCTCCAAGCATTTACCAAAGATTGACGTCAAGTTCTACTCTAATGAATTTGGCACAGGCTTTAGCTTACCATAAAATGTGTTACGAAGATATGCCACTGCAGGAGTTGCAAGCAACTCAGGAGCAGCGGACTATTCAAAATCTATCAGACACACTTAAAACCATTCTTCGGCTGTAG

Protein:

Promoter(3k):

>AM04G015540.1
GTACATCTGATTTGCATTTTAACAAAGCGGACATACCCCCACTGATAGGTATATCCGCTTTTATATTTTAACAAATCGGATATACCTCACTAAAGGTAGATCCGATTTCCCCCCACTAATTCTAATCGGATATACCTACCTTATATGTAGATCCGATTTAAGACAATTTAACCAGGGGTATTTTTGTCTTAAAATTTCTTGTGGGGGGTATACGGTGATATGACGGGGTACAAAAAAACCCCTGATTTAATAGAGAGGGGATGACCCCATTTCACCTTAGTTCAGAAAAATTGAAGATGAGAATAGTTAGAGAGAGGGAGAAGTCGAACTTGAGGGAGAGAAAGAGAGTAAAGTTGAAACACATTCTTCCATTTTCCCCTTACATCAAAATCTGAAAACCCTCACTTCTCACCACTTACATTTCAGTTCATGGATGCTTTAGAACCATGATTTCCATTCCTTCCTGCCATTCAAAATCTGAGTTTTGGTGCTCCTCCTCTTCAAGTGTGATCTGAAGCTTGCATGTGGGTGCAAGAGCTTGTTGGTGAAGATTGTCTTGCTGCATGTTAGTTTGGGGGTTTGCTTAGGACATTGTGAGAGCTACATTGTGGTTGAAAGAGTTCAAGCAGAGGGATTTGGTGTTGGGGTCAAATTTGGGAAGCTTAGAAGCCTATGGTGTGCTTAGGACTTCAATCTTGCTTGCAATTGATTTCTAATTCAGCTCTAAGGTGAGTTTTTTTGACTTAAGATGTATTCTTTTGATGTTTTTGCCATTAATATGATCTTATTCTGAACTTGAATGAAATGCATGTGTTTGATGATTTGAAATGTGTGAAATTCTGAAATGGTGCTGAAATGAAATTGTTGTATGTTGATTGAGTAAATTGCAAGACTTAATATCAAATTGGATACATTAATTAAGCACACATGTATTGTTTTCCATGAACTTTATGTGTATAGTGCATTTGAAGTTGAGTTTAGTGAGTTGGAGGAGCATAGGAATCAAAACAAAGACGGAAAAGAGTCAAGTTTTCACAAAATCTGCATAATCTGCACTTGCACTGCACAGGTCGCGTTCCGACCCGAGCTGTCGCGTCGCGACCAATCACGAACTATGAAGAGAAAAGCTACTGGATCCTATTGCGACGCGATGGGACAAGGTCGCGTCGCGACCAAGTGTAAATTTCAGCAAATGGGCTTTTGCACTATTTCAACGATAACTTTTGATTCGGGAACCCGATTGAGGTGTTCTCGGATGTGTTGGAAAGCTAACGCAAAAATCTATATTTATAAGTGAATAATGCTTTACATTTATGTATATATACTCTGTTACATTTGATGTATATTTGATTGAAATTAACGAGGTTACGATTATGCGGTAATTGTATAAGTTGAACGATATTGTTTCATTAAACGAACTAACGAGTGGGAACATAATAATGGTTATGAACAAAACACTATGGGGATTACGATCCCAAGAGGTTACTTAGCGTACTTGGAATGGGAGGTCAAATCTCCCGAGTTCAAGGCCCATAGTTGTTATCCGGTCAAGACCGGGGTGGGTTCTCCGTTGTGGTTGACTTTGTTCAACTACTTATGGATTACGCTAAGTTAAGAAAGAGGTTAATTAGCATACTTGGAATGGGAGGTTGTGGCACCTGAGTTCAAGGCCCAAATTGGTTATCCGGCCAAGGCCGGGTTGGGTTCTCCGCTGAAATTGACTTAGTTCAGGTTCTTATGAATTATGCTAAAGAGGATAAGTTAAGACAAGTAATAAGAGACTAAGTAGTGTACTTGAAATGAGAGGGCAAATCTCTTGAGTTCAAGGCCCATATTGGTTATTCGGTTAAGACCGGGTTGGGTTCTCCGTTGTGGTTGACGTTGTTCAACTACTTATGGATTACGCTAAGTTATTCAAGTGGAAAGATAAGTAAAAGACAACGAGAGGTATACGGTGAAGGGTCGCGAAAGAACTCACTGAGATTGTAAATCTCACCATTTATGTTGTTGTGTTTTCAGATTGACAGGATAAGACCAAACAAGGCGAGGAGAAGTAGCAGCTGTTGTGGCTACTTTAGTTTATGGGATCTTTAGAGACTTAAGTTTAATAGTGTAGTTCACCCTAGTTAATGGCTATGTATTGTATCTTTGAAACATTAGTCTTTGAGTTTGTAATTAAGTTAATGTATTAAGTCTAAATCGTTCTTTTGGATTTGAACTAGAATTAAGAAATGACTTATGTAAACTGTTTCAGTTATGTCGTTTAGTTGTCCTTTTGGTATTTATGTTGGGGTGAGGGGTGGGGTGGTTGATTGAGTATGTGTTTGGGAAGGGTTTGGGGTGTGGGGAGTAGGTAAAGTAGGGTGGGGGTTGAATTGTTGGAAGGGTATTGCTTTTCCCACACCCCCTCCTACTCGAAACACACCCCATAAGGGTGTGAAAAGACCAAAAGGCCAGGCCAAACCTCTTTTTTTTCACGAATTTTCACCTGTTCGAACACGGGCATTCGAACAGGTTCGAATGACATCGTTCGAGTGTGTTAAATTTTGACTTCACACCCTTTTGGGCGTTTTTCACCTATTCGCATGAGGTCATGCGAACCTGTTCGCATGACCTCGTTCGAACACATTCGAACGACATCGTTCGAGTGTGTTAAATTTTGACTTCACACCCTTTTGGGCGTTTTTAAACTGTTCGCATGAGGTCATGCGAACCTGTTCGAACAAGGTCGTTCGAACAGTCATAAAACACGTCCTCGCAGCGTCTCACGCGAGGTTATTTTTGGAATAAAATTTGTTAAGGGGTGTGAAAGAGTAGGAGGGGGTGTGGGAAAAGCAAAACCCTTGTTGGAAAACAACCTCTATACCCGTAACAGATAATCCCAAAACAAAAAGGCCCATCAAAAGCCCATTAGAAATCACATGCATTGGGTCAGTGTTGCTGCTGCTGCCAAGTTGTGAGCAAGAGATAGATTCCTCCTCCACTCTGTGTTGCCGGAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	247	501	1.30E-68
PF07714.20	PK_Tyr_Ser-Thr	249	497	4.70E-50
PF03109.19	ABC1	319	398	1.90E-08

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.1.2:STE_STE20-Pl

Gene Ontology

GO term	Description	Category
GO:0001558	regulation of cell growth	Biological Process
GO:0042742	defense response to bacterium	Biological Process
GO:0005515	protein binding	Molecular Function
GO:0042127	regulation of cell population proliferation	Biological Process
GO:0042274	ribosomal small subunit biogenesis	Biological Process

InterPro

InterPro term	Description
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
A0A1S2XJB5	_

SwissProt

SwissProt term	Description
SIK1_ARATH	Serine/threonine-protein kinase 1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G69220	Protein kinase superfamily protein
Medicago sativa L.	MsG0480018134.01.T01	_
Oryza sativa L.	LOC_Os03g54780.1	STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
Cucumis sativus L.	Csa010653	_
Glycyrrhiza uralensis Fisch.	Glyur001243s00035887.1	_
Codonopsis lanceolata	Cl_chr01_18280T	_
Arachis hypogaea L.	AH13G18790.1	Serine/threonine-protein kinase dst1 like

Expression pattern