Gene detail

Detail information of Am04G014010.1 Annotation

Gene ID	Annotation
Am04G014010.1	TCP family transcription factor

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G014010.1	mRNA	Chr04	51413896	51417434	-

Sequences

CDS:

>Am04G014010.1
ATGAGATATAACACTATCATGGAAGCTGATCATCATGAAAATGGAATCCGAAGCAGACCCAATTTCCCTCTTCAATTGTTAGAGAAAACAGACAACAACAACGATGTCTCACAACAACAACAACCTTGTTCCACCACCGCAAACGACGGCCCTATCACAACAACCACGGCGGAGAATCAAAAGAAGCCACCGCCAAAGCGTACATCAACAAAAGACCGACACACAAAGGTCGACGGACGTGGTCGCCGGATCCGTATGCCGGCAGCCTGCGCGGCCAGAGTATTCCAACTGACGCGTGAGCTTGGACACAAATCCGACGGTGAAACGATCGAGTGGCTTCTTCAACAAGCTGAACCCGCCGTCATCGCTGCCACCGGCACTGGTACAATTCCCGCAAACTTCACTTCTCTTAATATCTCTCTTCGGAGCTCTGGTTCCACCATGTCAGCTCCGTCACACTACTTTCGCGGTAATTACTTTAACCCTAGTTCCTTCTCTGCCGCTGCCGCCGCTGCGGCTCATCTTAGAAACCGCGCTGAATATGATAGAACTATGAACATGAACATGAATATGGTGGGAGAAGATTCTAGAAGAAATAACACTATGTTGGAGAATAATAATTCTTCTATTTCAGCAATTTTGAATTTCAACAACGTGAATGCTCTTTTACAAGCAAAACAGGAACTCCGGGAAGAAGCTGGCGGAGGAGGTGGTGGAGGTGGTGGTGGTGGTGGGGGTGGTGGAGGGTTTGAATTAATGGCTAATGATTCTGATGGAAACATAGGAAGAAAGAGAAGACAAGAACAAGAATTATCACAAATGGGAAGCTATTTGTTACAATCTAATGTGGGGTCACTTCCTTCAAGTCATCCTTCTAATACGGCAGCGTTTTGGATCCAAGGTGTGAGTGGTGGTAATGGTAATAATGTTAATGGAAATGGAAACGACGCCGTTTGGGCTATTCCTTCTGTTGGGAATAATGGTTTGTATAGAGGAGCTATGTCTTCTCCTGCTGGGTTTCATTTCATGAATTTCCCTACTCCAATGCCACTTATGCCCGGTGGCGTTGGTGTCGGTGGCGGTGGTGGTAATACTGCATTTTTAGCCGAAAGCAATTTAGGTATGCTTTCAGCTCTTAATGCTTATAGGCATATTCCGACCAACGGTGTTTCAGAGTCTCCGGTGAGTGGCGGACAACATCATGGTGGTGGTGGAGATGATGGACATGACTCAACTAGTCAACATTCCTGA

Protein:

Promoter(3k):

>AM04G014010.1
AGCTTTTAGGATTTGTTGTATCAGTTTGACAGTTCAATATTTTGTTATAACATTTCAGATTTTAATTCTCGGAATTTTTATTTTAAACTGTTTTATGTATTTTAGATTTTATTATTTATTATTAAAATAAACAGGTATAAAAGCAGGTTTATGAAAAAAAAATTCAAACAGTTGGGCATTAGCGACGAAATTAGCGAGGGAATTAGCGAGGAAAATTGGATGCGTGGCTGTCAGAATTTAACCACGTGGCTGTCTTTAGTAGCGAGGGAATTTTAATCCCTCGCTAATTAGCGAGGGAAAATTCTCTCGCTAATTAGTGAGGGATTCAAATTCCCTCGCTAATCCCATTAGCGAAGAGGGAATTAGCGAGGGAACCAGTCCGTCGCTAATTCCCTCGCAAATGACCATTAGCGATGGATTTAGGTCATTTTGCGAGGGAAATTTCCCTCGCTAATGACTAGTTTTTCTGTAGTATTGGATCTCGACCTTTGGAAGGCCAATCTATCCTTGCTTTATAATAGGTGTCTAAGCTGTGAGAAGCAGACCTTCCTTTTGGTAAAGTCCTCTTGAGTTAGGCCAACCTCTTCGCTTCTCAGGTCAATGACTTTTTATACTTTCCACCAACTCTTGTATCTTCATATCCACATCTTCATAAATGTCTGTATTCCATTGTTTCATAAATGTTCTTATTCCATTGTTTCAGGGTCTTTTTGAGACTCTTCAACTTCTCCTTCAATTTAAAACCCATCCAACCATCCGAGAAAGTATCATTACAAGATCTCCTAACCCACTTGCTGAAACCCATGTGCCGCAGCAGCGGTTATTAATCCTAAACGATTCAGGGCCCCACTCCCCAACAAAGTACTTGAGCACCAAAGGGAAATGGTCTGAGATATTTCACTCAAGGGCCTACAGTGAGCCTTCGCCCCAAGAATCAAACCAATTATCCGACACTAGATCTAAAATTCTATCCAGCATACTTATAGATGGTCCATTAGGTTGGAATGGTGTAAACTTACGCCTCAACAAAGGGATATCAGAAAAGGCCATAACCTAGATAAAACCATGAAATTCACTTGTTTCAAACTCAGCCCCAACAGATTCAACCACATATTGATACCCTTCCTTGCGGTCAGGTAGCAGACCGCATTGAAATCACCCAAAACACACCACATACCAGACCCAAAACCCATATTTAAAACTGATCTTTGTTTTCCTCTACAGTGAGCATGAATAAAACATGCCCTACCTTTTTTTCTTATGCATTTTTGTTTTCTTAGGGTGGGAAGGCTTTAATTCATGGCTTGGTTGGTCTGCCACAAAGAATTCACAACCAGGGTTGATCAATATAGGCACTATGGTAATGGGGTTACAAGAAAGAAGGCAAAGGAGGTAAACCACTTGGTTTGGTTGGCTGCCACGTGGTGTACTTGGAGAACCCGAAATGGTTTTATTCTTAATGAGGGTAATGCACAACCCGTTGTTAATATTAATCAAATCAAATGTACTTCATATGGGTGGTTTATTGGTAGGGCGGGTAGATCTCCAGGACACGTTGTTAGGGATGGCAATGGGGAACCCTTTGAGCATGGTACTATAGTATCCTCACCCGATCAATTTTTTTAATATACTATAAATTATGGTATTTGACGAAATAATAACATACAAAATATTTGTGGTTGGGTATTTGTTTGACGAATGTATTTTCTAAAGGAGAATTACACTCACGTACCCTCAGTTCTGGTTAAATAACGTATACACCCCCTCTATTTTATCAAAGACATTGACCTCCCTTAAGTTACACACCTCCCCTTTATTTTGTAGGAATAGAAGGAATAAGGGGTGTTTGTGTCTCTTAAACAAAACTGGGAGAGGTAAGTGAAACTTTCTCAACAAATAAGAGAGATGAGAGTGCATTTAAAAAAATAAATGGGGTGTCTCTGTCATTACTCATAACTTAGGGGAGGTGAGTGTAATTTCCCCTTTTTTTTAAAGTTGAATATACTTACTAGTAAGATATGCGCGGGCGGGGGTACGGGTGAACATTGTGCGGGTAATTCCTCGTACGTCATGGATAATTTTTGTAAGTGGCTAATGAGTATAGGCTAAATTGTCATCCCTACATACTGTATCAGATTGTTAATGCAATCCTGTTTACTACCTTAACCATATGTATCTGATTTGTTTCTTTTGTAATAGGTTAAAGTATCCTATATAGTACCTCCGTTAATACAATTTGCTTATAAAAAAACATATATGAGTATAACAAGATTTGGATGTCATCAACCCTTAATATTTTCTCAAAAAAATCTTAATATTTTTACTTTACTCTCAGTTATTCAAATCCAGTCTCATTTGTTTTTTAGCCATCCACTTATCGTAAGAAGAAAAATTTATCGTAAGAAGAAAAAGAAAACAGAGTTGAGACATTTATTTTAAGACTGTTGGAAATAAGAAAAGGGTCATTAAATGAGAGAAGACTAGCTGAAATGATTCCATTTTAAAAACAAAAAAACAAAAAGAAAGAAAAAACCATTACTTTTAATTTTTTTATTTATTACAAAACCCTTGTTATTCCCACTCATTATTTTTGTTGCTTAAAGCTAGCTGCCTCCTCTCCCTTATCCTCTATCATTCATTTTCATTCTCTCTCCCCCCTCTCTCTCTCTCTCTTCAGAGTGAACAACTCAGCTGCAAGAGCTCCCATCTGAAAGGAATTCCATGCTCCACAAGACATACCATCTGGAAAAGAGAGACCCACTAGTCCACTAAGCGATAGAAATTGAGGGTCACCTCACCTCTCACTCCTCTCTCTCTCTCTCTCTCTCTCTCAACAGAGAAAAAAAAGCTTTTTTTTTCCTCTTGTGGCAGTATTACTATTCCTACAGCTATCAGATACAAGAAAGAGAAAGAAAAAAAAAAACTTTTATTTTTATGAAATAAACCCCACCAATTTATTATTTTTCATAAAAAAAGTGCTTATAGTGAGAGGTTCATTAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03634.16	TCP	68	195	8.00E-39

Gene family

Gene family	Subfamily
Transcription Factors Family	TCP

Gene Ontology

GO term	Description	Category
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0043565	sequence-specific DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR005333	Transcription factor, TCP
IPR017887	Transcription factor TCP subgroup

trEMBL

trEMBL term	Description
A0A2Z6PVP9	_

SwissProt

SwissProt term	Description
TCP15_ARATH	Transcription factor TCP15

KEGG

KO	Description	Enzyme
K16221	transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G69690	TCP family transcription factor
Medicago sativa L.	MsG0580026091.01.T01	_
Oryza sativa L.	LOC_Os02g51280.1	TCP-domain protein, putative, expressed
Cucumis sativus L.	Csa005164	_
Glycyrrhiza uralensis Fisch.	Glyur000513s00025388.1	_
Codonopsis lanceolata	Cl_chr02_24690T	_
Arachis hypogaea L.	AH05G17680.1	Transcription factor TCP14 like

Expression pattern