Gene detail

Detail information of Am04G013310.1 Annotation

Gene ID	Annotation
Am04G013310.1	Leucine-rich receptor-like protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G013310.1	mRNA	Chr04	46607584	46609209	-

Sequences

CDS:

>Am04G013310.1
ATGGATTATAAACTACTACTAAAGATAGTTGCAATGCTAACAATGATAGCATTTGAAGGAGACATAAAGAGAACAACAGAAGCATGCAGTTCAGTTGATTTAGAAGGATTGATTGGCTTCAAGAATGAAATTCAGTTAGATACATCTGGTCGTTTGGCTAAATGGATTGGTAGGAATTGCTGTGAATGGGAAGGTATTATATGTGATAATGCAACCACTAGAGTTACTCATATCCATCTTCCAGGATTCATAGATGGAGATTTATTTCAAACACAAATGATGGGTCAGATTTCTACTTCCATAACACTCATAACTTCTCTTGAAGTTCTTGATCTAGGTGGATTAGTAGGCCTAAGTGGAACAATACCACAAACACTTGGAATGCATCTGCAAAATCTCCAAAAATGCTATCTTTTTGGAAACAATTTAACTGGCCCAATACCAGAAAGCATTGGTGAATTACGAAACCTACGGGAACTGGAACTGCATGAGAATAAGTTATCTGGGTCAATCCCTTCTAGTCTTGGAAGTTTGAAAAACCTTATAAGGTTGCTGCTTTATTCAAATCAAATTTCAGGTATAATACCCTTTTCAATTGGGAATTTGACAAATTTAGAAGAATTGGATTTTCATGATAATGCTCTTATTGATCATATACCCAATAGCATTGGTCAAATGCAAGCTTTGGAAAAACTTGATCTTTCAAGCAATTTGTTAAGTGGGAGTATACCTTCTTCACTAACTAATTTAACTGCCATTTCAGTTTTGTATATGGACACCAACAAACTTGAGGGAACAATCCCATTTCCCTCAAGTTCAGGTGAAATGCCTTATTTGGCCTTCTTAAGACTTCATAATAACAATCTGAATGGAAATGTATCTCCAAATTTTGGCTACTTGGTTTCTCTTCAAAGAGTTTCATTATCAAACAACAAACTTGAAGGGGCATTGCCTTCTAGTTTAGGAAATTTGCTTTCTTTAGCAGAGCTTTACCTCAGTGAAAATTCTTTCTCTAGCCAAATACCAAAATCAATAGGCCAACTCTCTCAGCTCATAATGTTAAACATTTCCAATAATTTGATTCAAGGGCCATTACCTAAAGAGATGTCTTCCCTTCAAAATCTTCAAACACTTGATCTTTCTTTTAACCCTTTGAACCTCTCTTCCTTTCCAGAATGGTTAACAAATCTGCAATCGCTTTCGCGCATTTACTTTGCAGGTTGTGGTATTCAGGGTCAAATTCCAAACATTTTGGAAAGAACTATTAGTCCAATACAAGAATTGGACTTATCAGTGAACCTTCTCATTGGAACCATACCATCATGGATAGGATCTCTCAGTCAACTTTACTTGTTAAACCTCTCAAAAAACTCACTTGATTCACACATCCCTGATTCTATTACAAATTTGCATGATCTTGGCGTTCTTGATCTTCACTCAAATGAGTTAACCGGCAATATACCCCATGGATTTCTCAGGTTGAGGAATCTGAAGGAATTGAATTTATCAGATAATGTACTTGAAGGTGAAATTCCAGAGGGTAAACCATTAACTGATTTTCCTGGAAGTTCATATTCTGGAAATAAAGGTTTGTGTGGGAAGCCTCTCAGTCCTTGTAAACTTTGA

Protein:

Promoter(3k):

>AM04G013310.1
ATTGTGAATGGGTTATTGAGAGTGACACCAGATATTGTGAATGAAATCATTGTTGATGCTCTAATGAAAAGCATCTAAAGTATTAGAAGAAGCTATTGCAAAAGAAGATTTTAGAAGCTTGTAAAAATAATGTATTGTGTAAACATTTAATAACTTGTTTTTGAGACAAGTTCATTGTCTGATAAATGGACAATAGAAATAGAATAATATAAGAATGATAAATAGCCATGACATTCCTTGAATAGCTAGCTTATTGGAGAGATTAAATTTCAAGATCACTAACCAATAATGATATCAAACTCACTATTTGATAATTTGTGCAGCTTTATTTGGATATGAAATTTGTGATGATATTTTCGTCTCAAGGCCGTTACTTATCTGACTATCTGCGTCAGGCTATTAAAAACATCATTGATCGGGCTATTGATGCTGTTGCTGCTACAGGGATAGATCCCAACAGGTACATATATAAATATACAGATATATTATATCTAACCTAAAAGAACATGTGTGGATTTATACTGATTAAATATCAATTAAAGATGTGACTAGACTATATAGCTGCATCACATGAATACCTTCTTGATGGAGTTATCCATCTTTATTTTCCACTGCTTAATACTAACTATGAGCCTTGAATGACAGTGGGTTGCCAGAGGATGATTGGTTTGTTGAAGTTTCTGAAATAACTATCAAGATGATAACTGAGAAAGCCAGTCACCTTTGATAATGTAGAGGAAGATGCTTATAGCCCCACTGCATCACTCCAAGCATAATCAGTATCATCAATCCATTCTCAAGAAAGGGATTGTAATTCATCTACTTGTCAATCTTGGCATGTTGTAGAGAGCAGAAAGGAAAGAAGATATTGAAGAGAAGGAGTTACACACATTTTTTATCTACCCGGATAATTGACCAGTCACCTATGATATGTGGTGCTTTTTAGTTTTTACTGATGTGCTTTTCAGGGTTCATAGAATGTGCTGCAGCACTTCAAACTTGTGTAGATAAATTGCATTACATCTGTGTCCATTCCACAATCCCATGCTGCACCTTCGGCTCTCATATACATTGCAAGTATGCTAGAAGATGTAGGGTCTAGTGAAGCTTGGTTGATAGATGAACCCCTATTACTCTTAAAACACTGCTAGGGTCTTCAGGTTTTGGATCTATTGTAGCTAATTCTATATTACATTTTACATTATTACCATAGACAATTGATTAATTTAGATATGTCTGACATTACGTTTTTTTAGTCAAATTCCTACCTACTTTTTACTTTATAACCAAAAGGGTAAAATATGTTTTTAGTCCCTACAAAATCGGCTCCTTCTAAGTTTAGTCCCTACATTAACGAAATAGGCATTTTGGTCCCTACATTTTTTTTCCATTTTCATTAATAGTCCCTGTCGTTAAATCCATCTGATTAGGCAACGGAAATATGACGTGGCTGTTACACGTGGAATTTTTTTATCTACGTGGCTTTTTTTATTTAGGGTAAAATATGTTTTTGGTCCCTACAAAATTGGGTCATTCTAAGTTTAGTCCCTACATTAACGAAATAGGTGTTTTGGTCCCTATCTTATTTTGCTGTTTTCATTATTAGTCCCTGACATTAAATGTTGCTGATTGGGCTAACAGAATCATGACTGTACTTGCCACGTGAACATTTTAATTGATGTGGCGTCCACGTGGCATCCTAACTCACATTTTTTATTACTTATATTTAATTCAATTTAAAATAAAATAAATTTTCAGCAAAATAAAATAATATTTAATTGATGTGAGTTAGCATGCCACGTGGATGCCACATCAATTAAAATGTCCACGTGGCATGTACAGTCATGATTATGTTAGCCCAATCAGCAACATTTAACGTCAGGGACTAATAATGAAAACAGCAAAATAAAATAGGGACAAAAACACCTATTTCGTTAATGTAGGGACTAAACTTAGAAGGACTCAATTTTGTAGGGACCAAAAACATATTTAACCCTAAATAAAAAAAGCCACGTAGATAAGAAATGCCACGTGTAACAGCCACGTCACATTTCCGTTGCCTAATCAGATGGATTTAACGACAGGGACTATTAATGAAAACGGAAAATAAATGTAGGGACCAAAACGCCTATTTCGTTAATGTAGGGACTAAACTTAGAAGGAGCCGATTTTGTAGCGACTAAAAACATATTTTACCCTAACCAAAACGAATTGATTAATTTAGATATGTCTGCCATTACTTTTATTTTAGTCAAATTCCTACCCACTTTGTCATTGTCATGACACTATTGAACTTAAATTCTTAAAATCTAAGGTAGCATTGGTATATGCATATACAACAAAACAAAACAAATTTTTCCACTGTTTCTGGTTCTAGATTTGGAGATGATATGGATTTACTTTTAAATTTTAATAAAGAAAATCTAACAAGACACTTACATGAAGTGAGGATCTGACATTCAGTAGCAGCCAAAATTGGGTACTTTGATTCTTTCTTTAAAGCTGTTGCCTTAAGGGTAACACTGTTTATGATAGATCATTGGTATTCAAAATTGGGGTCACAGATAAAAATAATGAACTGTGCAACCTTTGAGAAAGCATGGCTCACAAATTTAAGATGCCTCTTGGAATTCAAATTATGGACAGAGAAATTAGTCCTTGAAGTACATAAAAATTTCAGTAATAGTACTGTATCTTCTAATTTTACTCAACATAACATTCATAAAGGAAGAGTTTTATCAGAAAGTAGAAGTTGACAAAATGTGCCAGTCTTTGGAGTCTAATCAATCTATCACTCTAACTACTATTAATGACATTATGATTAAAGCAAATATGCTTTCCAGCTTTGATATTTAAAAGTGAAAAAGTGTCCAAAAGGAAAAGTTTAGATCATAAATGCAATCCCATTTTGTTATTATCCTTTATCCTTTGTCCTTTGAAGTGTGAACTATTTCTCAAAGTGAAGTCTAGCCAACATTCTTAAGAGTCATCTCCATCAAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF13855.9	LRR_8	155	215	3.30E-33
PF13855.9	LRR_8	326	385	3.30E-33
PF13855.9	LRR_8	425	483	3.30E-33
PF13855.9	LRR_8	448	507	3.30E-33
PF12799.10	LRR_4	179	221	9.30E-27
PF08263.15	LRRNT_2	33	69	8.20E-08

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0016301	kinase activity	Molecular Function
GO:0005886	plasma membrane	Cellular Component
GO:0016773	phosphotransferase activity, alcohol group as acceptor	Molecular Function
GO:0140096	catalytic activity, acting on a protein	Molecular Function

InterPro

InterPro term	Description
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR003591	Leucine-rich repeat, typical subtype
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat
IPR000225	Armadillo

trEMBL

trEMBL term	Description
A0A8B8M4Y1	_

SwissProt

SwissProt term	Description
ERECT_ARATH	LRR receptor-like serine/threonine-protein kinase ERECTA

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G26330	Leucine-rich receptor-like protein kinase family protein
Medicago sativa L.	MsG0880045428.01.T02	_
Oryza sativa L.	LOC_Os03g21730.1	receptor-like protein kinase precursor, putative, expressed
Cucumis sativus L.	Csa020669	_
Glycyrrhiza uralensis Fisch.	Glyur000157s00015839.1	_
Codonopsis lanceolata	Cl_chr01_14390T	_
Arachis hypogaea L.	AH15G12420.1	Putative LRR receptor-like serine/threonine-protein kinase At4g08850 family like

Expression pattern