| Gene ID | Annotation |
|---|---|
| Am04G012110.1 | Pectin lyase-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G012110.1 | mRNA | Chr04 | 37949683 | 37953251 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00295.20 | Glyco_hydro_28 | 93 | 399 | 2.90E-83 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH28 |
| GO term | Description | Category |
|---|---|---|
| GO:0047911 | galacturan 1,4-alpha-galacturonidase activity | Molecular Function |
| GO:0016829 | lyase activity | Molecular Function |
| GO:0009826 | unidimensional cell growth | Biological Process |
| GO:0009664 | plant-type cell wall organization | Biological Process |
| GO:0009057 | macromolecule catabolic process | Biological Process |
| InterPro term | Description |
|---|---|
| IPR011050 | Pectin lyase fold/virulence factor |
| IPR012334 | Pectin lyase fold |
| IPR006626 | Parallel beta-helix repeat |
| IPR000743 | Glycoside hydrolase, family 28 |
| trEMBL term | Description |
|---|---|
| A0AAN9PPF4 | _ |
| SwissProt term | Description |
|---|---|
| PGLR4_ARATH | Polygalacturonase At1g48100 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G26610 | Pectin lyase-like superfamily protein |
| Medicago sativa L. | MsG0580025736.01.T01 | _ |
| Oryza sativa L. | LOC_Os01g44970.1 | polygalacturonase, putative, expressed |
| Cucumis sativus L. | Csa009099 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000642s00034720.1 | _ |
| Codonopsis lanceolata | Cl_chr01_13080T | _ |
| Arachis hypogaea L. | AH15G09870.1 | Polygalacturonase At1g48100 like |