Gene detail

Detail information of Am04G011200.1 Annotation

Gene ID	Annotation
Am04G011200.1	Zincin-like metalloproteases family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G011200.1	mRNA	Chr04	33177420	33187359	-

Sequences

CDS:

>Am04G011200.1
ATGAGACACGAACTTCTTCTGGTCGGAGCCCTTCTTATAGCAAACATGCTAATGGCTACAAGCCTTACCCGAACTCTTTCTTTCTCCCACCGTTCCATTAACCCACTTCTAAAACGCACTTCTCGTTCCATTTTCCACCCCAAACAATTCCCTAAATCTCAACCTTGTCCTCTCTGGACCTCTTCTTTCTCCATCTGCTTAGACTCACTTCACAAGTCCACTTCCCCTTCTTCCTTCACCTGCTCTTTTTCTTCTTCTCCTTCCCCTTCCCCTTCTGCTTTATCAATGGCCACTTCCGCATTCAACGACGTCGTCGAAGCCAACCCTCTTCTCCAGGACTTCGTGTTCCCACCCTTCGATGTTGTAGAACCCAAACACGTGCGACCTGGCATTCGCACACTCCTCAATCAGCTGGAACGTGATTTGGAGGAACTTGAACGCACCGTTGAACCCTCGTGGCCCAAGTTGGTTGAACCGTTGGAGAAAATTGTTGATAGGTTGTCCGTTGTTTGGGGTATTGTCAATCATCTCAAGTCCGTTAAGGATAGTTCTGAGCTCCGATCAGCTATTGAAGATGTGCAGGCAGATAAGGTTAAGTTTCAGCTTAGGTTGGGGCAAAGCAAACCTATTTATAATGCGTTCAAAGCCATTCAAGAGTCTCCTGAGTGGCAGACACTTAGTGATGCTCGCAAGCGTATTGTTGAAAACCAAATAAAGGAGGCAGTTCTTAATGGTGTTTCTCTTGAAGATGATAAAAGAGAACATTTTAACAAAATCGAACAGGAGCTGGAAAAGTTATCACAAAAATTTGAGGACAACGTTCTGGATGCCACAAAAAAGTTTGAAAAGCTCGTTAAAGATAAGAAAGAGATTGAAGGATTACCTGCTACTGCTCTTGGGTTGGCTGCACAAAGTGCAGTAACCAAGGGGCATGAAAATGCCACCGCTGAGAATGGGCCGTGGGTAATTACATTAGATGCTCCGTGTTATATTGGTGTTATGCAACATGCTCTGAATCGATCTTTGCGAGAGGAAGTCTACCGTGCATATGTAACGCGTGCATCTAGTGGAGATCTGGATAATACTGAAATTATTGAGCAAATTTTAAAGCTTAGGTTGGAAAAAGCCAAGCTTCTCAACTACAATAACTATGCTGAGGTTAGCATGGCGACCAAAATGGCAACTGTTGATAAAGCAGAAGAACTTCTAGAAAAGCTTCGTAGAGCTTCCTGGGATGCTGCAGTGAAAGATATGGAAGACCTTAAGAAATTCTCAAAAAATCAGGGTGCATTGGAAGCTGATGATTTGACACATTGGGACATTAGCTTTTGGAGTGAGAGGCTTCGGGAATCCAAATATGACATTAATGAAGAAGAGCTGCGCCCATTTTTCTCTTTACCAAATGTTATGGATGGACTATTTAATCTCGCGAAAACACTTTTTGGCGTTGAAGTTGAGCCAGCTGATGGTCTAGCTCCGGTTTGGAATGATGATGTCAAGTTCTTTCGTGTTAAAGATTCTTCAGGCAGTCCAATTGCATACTTTTATTTTGATCCCTACAGTCGTCCTGCTGAAAAAAAGCAAGGTGCGTGGATGGATGAAGTTGTTGCTCGTAGTCGTGCACTGTCACGTGATGGTACCTCAGCAAGGTTGCCTGTTGCCCACATGGTGTGCAATCAAACACCTCCAATAGGAAACAAGCCAAGTTTAATGACATTCCGTGAGGTTGAAACTGTCTTCCATGAATTTGGCCATGCACTTCAACATATGCTTACCAAGGAAGATGAGGGTCTGGTTGCTGGTATTAGGGGGATAGAGTGGGATGCTGTTGAATTACCTTCTCAATTCATGGAAAACTGGTGTTACCATAGAGATACTTTAATGGGCATTGCAAAACATTTTGAAACTGGGGAGAGTCTCCCTGATGCTGTATATTTGAAGCTTGTTGCTGCTAGAACTTTTCGTGCTGGCTCTCTCAGTCTTCGACAGCTAAGATTTGCCAGTTTAGATCTGGAACTTCATACTAAATATATTCCAGGGGGATCTGAATCCATATACGATGTTGACCGCAGAATTTCTGAGAAAACTCAAGTGATTCCTCCATTTCCACAGGACAGGTTTCTTTGCAGCTTTAGTCATATATTTGCAGGTGGATATGGAGCTGGATACTATAGCTACAAGTGGGCTGAGGTGCTGTCTGCAGATGCTTTCTCTGCATTTGAGGATGCAGGATTGGATAACAGCAAGGCTGTTAAAGAAACGGGACACAAGTTCCGGGAGACCGTTCTTGCTCTTGGAGGTGGCAAGCCAGCCTTGGAGGTCTTTGTGCAATTCCGTGGGCGAGAACCAACACCAGATGCATTGCTCAGACACAATGACCTATTACCTGTTGCAGCTTAG

Protein:

Promoter(3k):

>AM04G011200.1
CTGAAGTTAGTTGATGTCGAATAAAAATATTGATGCAACAAAGTTGACATTCTTGTACCTCCAAATCCAAATGATCAACAATGTGGATGATGGAACCACCTCCTTCACAAGGTCTTATCAGGTACTCGCTGGGCAGCATCTCAGCTCTGACAAAATGCTGCACGGGAGGCATGCTTGGACCATTTTGTGTATTTTTGAGAGAGCTCTCACAGATCTCTGAAGCAGGGAAACATTATGAGAATGACATAAATATATGCATGTACCTCAGGAGTAGGACTTTTTGTAATATAAAAAAAATGGGTTAGGAATTGCACACACAAGATTTTCTTTTTTGACTATAATAACATCCAGTCAAATAAAAATAATAAGAGTTTTTTAGAGTCACTTACAACTAGGCTTCCATCTTCTAAAACAGATGTGTAACGCAACAACCAGAAGTCCCGAGCAGGTGCCAATGTGGTTGGCGCATATAGCTGATTATAGCAAAGTAAGCGATTAAGAGATTTAGTCTGTGTGAGATTACAGAGAGTAGCCATTCATTCACATTGAGTATGAGTTGCTTTACCTGCATGTAAAGCAGCTCTATAGTTCCACCATTTGCTGTGGGAAGCACATTCAGAATATCAACTGCTCGGCAATCGCGATACCATGAGGGGCGATCTTTAAGGATTTCTGCAACCTGGAAAGAGTACGGTTGATCATGACATCCATAAACATAGGCAAGACAATTAGCATAAAGACAATAAATCCAGAGCACTTACCCTTGTAGGTTCTAGCCCCACTAGGCCACATGCTCTGGCTACCACACCAGGGCAGCCATGAGAAATTGCAACGATTCCAATGGAATATTGGAATCCGGACCAGGCTGCACAAATAAGCAAGAATGAATAAAAAACAATAACGGAAAAATGTTTGATCAAGCAAGCATGCTTTAAATAGAAGTGAAAGCTTTATTATAGAAATCCATCAGAAGTTAGGGTTTCAGGTTGCTCAAAGATGTAAACTTAGGCAGTATTTAACCAATTCTAACTTATGTCCAGGCCTCATTAGATGAAAAATTGAACAAAACAAAACAACTAATTAAGTTTCTTCTGTAATGGACAAAAGTCTGGGGGGGGGGGGAATTCACATTATTTCATTAGGCCAAACAGACAAAGCCAAAGATAACATAAAGGTACCCAACAAACAATCATAATCCCACTAACCCAGCAGGACTAGCATCCCTTGGAGGAGAAATTGAAGAGGAGTAAAAGGGGGTTTGTGATTTGGGAGAGAGGAAAAGAGATTTAGATCGAATCAGAGAGTGAGTGATCAGAGTGAGAGAGTAAGCAAGTGAGAGAAGGGAAATTTAACCTGAATTAGGGGATTTGGGAAGCGGCAAATTGCCCTCGAGGCGCTCGACGCGAAAGGCAACAGGAACATTGATATCGCAGGACAAGAAGAAGCGAAATTCGTTGTTGATCATGTGAACTTGTTGGATTGTGTTTAACTATCAGAATTGTTAGGGTTCTTTGCCAGCGGTGACGGAAACTTGCGGTGACGGAAACTGTTGCCAACGGAATTGGAGTTCACGGCGTGCTCTTCACTTTTACAGCTTTACTTGAGAAGTGGCGTTGATGGAGTTCACGGTGTGCTCTTCACTCGTGCTCTTCACTTCTACAGCTTTACTTGAGAAGTGGCGTTGATGTGAGAAGCACGATTCTCATTCTCAGATTCTCGATTGCAATTTTCATAAAAAAACAATGTTTTCAAATTACAATAAAGGCACCGAGAGAAGTGATTTGGGCCAAAATGCCAATTTATAGTTAACCTAGTAATCTAGGTAAAGATTAAAAATCTCAAAAAATCTCAACCATTCGAATTATTTTAGATTAAATCGTACGACTAGAATTAATGTTTCACCGGTGAAATATTTGATTTGGTCTTTCACCCTAGAACTACCCGAAAAAAATACTTCTATCATTAGTATTTCCCAAATACGTAGCCAATAATTTTTTTAAACCCGTTCTGTTTGGAGGCCTAAAGCTAGGGTTTCATATGGTTGGGCTGACCCTGCCGTCCTTCCAATTAAATCAAGATTACTAACTTAAATGAATTATAATAAAGTTAAGCCTTAAATATATGGTTTGTCCTTGCAAATATATGTTTGATTCAATTTAATCTTATAAAAAAAATAGTTTAGCCCCTGCAAAAACAAAACACTTGCAGTTTGGTCTTTGACGTTAACTTTCCGTCCATAAAAAGGTGATTTGGTTAAGAGAGATGACATTAGCAATGATGTCATCGACACTTGTCAACATCTTATTGGATGGTTGTGCCACGTGGTACTAACACGCCACATCATCATCTTCATGTCACGTCAGGAACCAACAAATGGTTGCCACGTGGCGCTCACATGGCAATGTGGGGCACAATGTTACTAAAAAATAATAACCCAATTGCACAACATGGGGATCCAATCGAACCCACTATCTCAAGGTGGTGGACACTCACAAATACCACTAAGCCACAAGATGGCTTGTGAACATTAAGACAATAATAAATTGAAGATGAGCCCGACGAGAAAAAAAACATTTTAAATTAAACAAAATACCATAAGCTATTAGTTGTATGCCAATTAGTTTGACCCTGCCAAACATTATCTTTGATAGTAAAGATCTTATGTAACTAATCATAAAAGTGACAAGGTGTCACATGGTTTAATTGATATACATTGTTATTGTAAAAAAGATTTACATTATCAAGACAACGTCAAACACTTTTTATGACATATTATTTTATGATTAACGGACATTGTAAAAAGTATCTTACACCAATGATGTATATAACTTAAATCACACACATGCTAGCCTCTATATATATATATATATATATATATATATATATATATATATATATAAATAAAAGTAACCCAAAGAAAAACAAAAGTATCCACATCGAAGAGTATTAACCAAGCTAACCAAAAAAGCTTATTATACAGATAGAGAGAACCGTTTCAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01432.23	Peptidase_M3	333	793	1.50E-133
PF19310.2	TOP_N	131	253	1.20E-55

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0006518	peptide metabolic process	Biological Process
GO:0009507	chloroplast	Cellular Component
GO:0006508	proteolysis	Biological Process
GO:0046872	metal ion binding	Molecular Function
GO:0016020	membrane	Cellular Component

InterPro

InterPro term	Description
IPR034005	Peptidyl-dipeptidase DCP
IPR001567	Peptidase M3A/M3B catalytic domain
IPR045090	Peptidase M3A/M3B
IPR045666	Oligopeptidase A, N-terminal domain
IPR024080	Neurolysin/Thimet oligopeptidase, N-terminal
IPR024077	Neurolysin/Thimet oligopeptidase, domain 2
IPR024079	Metallopeptidase, catalytic domain superfamily

trEMBL

trEMBL term	Description
A0AAN9JZL5	_

SwissProt

SwissProt term	Description
OOPDA_ARATH	Organellar oligopeptidase A, chloroplastic/mitochondrial

KEGG

KO	Description	Enzyme
K01414	oligopeptidase A	[EC: 3.4.24.70]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G65620	Zincin-like metalloproteases family protein
Medicago sativa L.	MsG0580025588.01.T01	_
Oryza sativa L.	LOC_Os02g58340.1	oligopeptidase, putative, expressed
Cucumis sativus L.	Csa004222	_
Glycyrrhiza uralensis Fisch.	Glyur000126s00013670.1	_
Codonopsis lanceolata	Cl_chr03_30550T	_
Arachis hypogaea L.	AH05G38630.1	Organellar oligopeptidase A, chloroplastic/mitochondrial like

Expression pattern