| Gene ID | Annotation |
|---|---|
| Am04G011050.1 | Small nuclear ribonucleoprotein family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G011050.1 | mRNA | Chr04 | 32624580 | 32629989 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01423.25 | LSM | 13 | 80 | 1.50E-20 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0000398 | mRNA splicing, via spliceosome | Biological Process |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0005688 | U6 snRNP | Cellular Component |
| GO:0046540 | U4/U6 x U5 tri-snRNP complex | Cellular Component |
| GO:0005681 | spliceosomal complex | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR033871 | Sm-like protein LSm5 |
| IPR001163 | Sm domain, eukaryotic/archaea-type |
| IPR047575 | Sm domain |
| IPR010920 | LSM domain superfamily |
| trEMBL term | Description |
|---|---|
| A0A5B7A1J2 | _ |
| SwissProt term | Description |
|---|---|
| LSM5_ARATH | Sm-like protein LSM5 |
| KO | Description | Enzyme |
|---|---|---|
| K12624 | U6 snRNA-associated Sm-like protein LSm5 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G48870 | Small nuclear ribonucleoprotein family protein |
| Medicago sativa L. | MsG0480022764.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g32310.1 | LSM domain containing protein, expressed |
| Cucumis sativus L. | Csa001415 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000183s00013021.2 | _ |
| Codonopsis lanceolata | Cl_chr08_36880T | _ |
| Arachis hypogaea L. | AH03G46400.1 | Sm-like protein LSM5 like |