| Gene ID | Annotation |
|---|---|
| Am04G010520.1 | Pentatricopeptide repeat (PPR) superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G010520.1 | mRNA | Chr04 | 30527764 | 30532462 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 180 | 229 | 1.40E-105 |
| PF13041.9 | PPR_2 | 254 | 303 | 1.40E-105 |
| PF13041.9 | PPR_2 | 290 | 338 | 1.40E-105 |
| PF13041.9 | PPR_2 | 324 | 373 | 1.40E-105 |
| PF13041.9 | PPR_2 | 397 | 441 | 1.40E-105 |
| PF13041.9 | PPR_2 | 464 | 513 | 1.40E-105 |
| PF13041.9 | PPR_2 | 537 | 579 | 1.40E-105 |
| PF13041.9 | PPR_2 | 570 | 618 | 1.40E-105 |
| PF13041.9 | PPR_2 | 674 | 714 | 1.40E-105 |
| PF12854.10 | PPR_1 | 321 | 353 | 4.80E-82 |
| PF12854.10 | PPR_1 | 357 | 386 | 4.80E-82 |
| PF12854.10 | PPR_1 | 391 | 422 | 4.80E-82 |
| PF12854.10 | PPR_1 | 600 | 631 | 4.80E-82 |
| PF01535.23 | PPR | 362 | 391 | 5.20E-80 |
| PF01535.23 | PPR | 398 | 426 | 5.20E-80 |
| PF01535.23 | PPR | 572 | 602 | 5.20E-80 |
| PF01535.23 | PPR | 608 | 636 | 5.20E-80 |
| PF01535.23 | PPR | 677 | 707 | 5.20E-80 |
| PF13812.9 | PPR_3 | 313 | 369 | 3.30E-52 |
| PF13812.9 | PPR_3 | 557 | 613 | 3.30E-52 |
| PF17177.7 | PPR_long | 373 | 494 | 3.10E-27 |
| PF17177.7 | PPR_long | 483 | 613 | 3.10E-27 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
| GO term | Description | Category |
|---|---|---|
| GO:0003729 | mRNA binding | Molecular Function |
| GO:0030244 | cellulose biosynthetic process | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| GO:0016760 | cellulose synthase (UDP-forming) activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A371IBN6 | _ |
| SwissProt term | Description |
|---|---|
| PP247_ARATH | Pentatricopeptide repeat-containing protein At3g22470, mitochondrial |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G22470 | Pentatricopeptide repeat (PPR) superfamily protein |
| Medicago sativa L. | MsG0580025496.01.T01 | _ |
| Oryza sativa L. | LOC_Os07g42354.1 | PPR repeat domain containing protein, putative, expressed |
| Cucumis sativus L. | Csa004547 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000341s00020142.1 | _ |
| Codonopsis lanceolata | Cl_chr05_25650T | _ |
| Arachis hypogaea L. | AH04G00440.1 | Pentatricopeptide repeat-containing protein At3g22470, mitochondrial like |