| Gene ID | Annotation |
|---|---|
| Am04G010410.1 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G010410.1 | mRNA | Chr04 | 30239144 | 30246370 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF02373.25 | JmjC | 265 | 388 | 2.50E-39 |
| PF02375.20 | JmjN | 89 | 121 | 1.70E-14 |
| PF02928.19 | zf-C5HC2 | 485 | 536 | 2.70E-08 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Jumonji |
| Epigenetic Regulators | JMJ13 |
| GO term | Description | Category |
|---|---|---|
| GO:2001141 | regulation of RNA biosynthetic process | Biological Process |
| GO:0008168 | methyltransferase activity | Molecular Function |
| GO:0140680 | histone H3K36me/H3K36me2 demethylase activity | Molecular Function |
| GO:0032259 | methylation | Biological Process |
| GO:0000077 | DNA damage checkpoint signaling | Biological Process |
| InterPro term | Description |
|---|---|
| IPR004198 | Zinc finger, C5HC2-type |
| IPR003349 | JmjN domain |
| IPR003347 | JmjC domain |
| trEMBL term | Description |
|---|---|
| A0A8B8LWR8 | _ |
| SwissProt term | Description |
|---|---|
| JMJ13_ARATH | Lysine-specific demethylase JMJ13 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G46910 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
| Medicago sativa L. | MsG0580025450.01.T01 | _ |
| Oryza sativa L. | LOC_Os10g42690.1 | jmjC domain containing protein, expressed |
| Cucumis sativus L. | Csa019051 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000450s00024049.1 | _ |
| Codonopsis lanceolata | Cl_chr02_36630T | _ |
| Arachis hypogaea L. | AH05G39290.1 | Lysine-specific demethylase JMJ706 like |