| Gene ID | Annotation |
|---|---|
| Am04G009880.1 | Replication factor-A protein 1-related |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am04G009880.1 | mRNA | Chr04 | 28550332 | 28554157 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF08646.13 | Rep_fac-A_C | 549 | 698 | 7.90E-52 |
| PF04057.15 | Rep-A_N | 5 | 101 | 3.70E-32 |
| PF16900.8 | REPA_OB_2 | 388 | 491 | 1.10E-30 |
| PF01336.28 | tRNA_anti-codon | 278 | 366 | 3.50E-12 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0008270 | zinc ion binding | Molecular Function |
| GO:0051321 | meiotic cell cycle | Biological Process |
| GO:0006289 | nucleotide-excision repair | Biological Process |
| GO:0009507 | chloroplast | Cellular Component |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR036875 | Zinc finger, CCHC-type superfamily |
| IPR001878 | Zinc finger, CCHC-type |
| IPR031657 | Replication protein A, OB domain |
| IPR007199 | Replication factor-A protein 1, N-terminal |
| IPR047192 | Replication factor A, C-terminal, eukaryotes |
| IPR013955 | Replication factor A, C-terminal |
| IPR004591 | Replication factor A protein 1 |
| IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type |
| IPR012340 | Nucleic acid-binding, OB-fold |
| trEMBL term | Description |
|---|---|
| A0A3Q7XXI7 | _ |
| SwissProt term | Description |
|---|---|
| RFA1C_ARATH | Replication protein A 70 kDa DNA-binding subunit C |
| KO | Description | Enzyme |
|---|---|---|
| K07466 | replication factor A1 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G45400 | Replication factor-A protein 1-related |
| Medicago sativa L. | MsG0280008380.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g02040.1 | RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed |
| Cucumis sativus L. | Csa005426 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000280s00015697.2 | _ |
| Codonopsis lanceolata | Cl_chr02_35630T | _ |
| Arachis hypogaea L. | AH01G21150.1 | Replication protein A 70 kDa DNA-binding subunit A like |