Gene detail

Detail information of Am04G008580.1 Annotation

Gene ID	Annotation
Am04G008580.1	Protein kinase superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am04G008580.1	mRNA	Chr04	24042499	24045705	-

Sequences

CDS:

>Am04G008580.1
ATGAGGGGGAAACCGTCGCAGTATTCCGTATCGCTGGTGTGTAACCGAAATGGTGTTGGTAATAGCAGTGATGAATCATGCTATAGCAGTGGAAAGAGTGAAGTTAGGGATGTATTGAGAAGTGAAAGGGGGAAATTGAAGGTGTTTAGTTATGGGGATTTGAAAGCTGCCACTAAGAATTTCAAGTCAGATGCATTGATTGGTGAAGGTGGTTTTGGTAAAGTCTACAAAGGTTGGTTGGATGAAGAGACTCTCACTCCTTCTAAACCTGGCTATGGAATCATCGTTGCCATCAAGAAATTGAAACCTGATAGCATGCAAGGGGTTCAAGAATGGCAGTCAGAAATCAACTTTCTAGGAGGCATTTCTCACCCAAACCTGGTCAAGCTATTGGGTTACTGTAGATACAATGACGAATTTCTCCTTGTGTATGAGTTCATGCCAAAGGGAAGCTTGGAGAACCATCTCTTCAGAAAAAATACTACCATGGAACCACTGTCTTGGAACACTCGACTCAAAATAGCTATCGATGCAGCTCGGGGCTTGGCTTTCTTGCATTCCTCAGAAAAGCAAGTCATATATAGAGATTTCAAGGCTTCCAATATACTTCTTGATGGGAATTACAATGCAAAAATTTCAGATTTTGGCTTGGCTAAATTTGGGCCATCTGGGGGAGATTCACACGTTACTACAAGGATCATGGGAACATATGGCTATGCTGCTCCAGAATATATGGCAACCGGTCATTTGTATGTGAAGAGTGATGTGTATGGATTTGGTGTAGTGCTACTTGAAATGCTGACAGGATTGCAAGCACTTGATACAAAGAGGCCTACAGGGCAGCAGAATCTGGTTGAATGGATTAAACCTTCTCTTTCTGATAAAAGAAAGTTGCAAACCATTGTGGATCATAGATTAGAGGGCCAATACTCATCCAAGAAAGCATTGCTAGCAGCAGAGCTTATTCTAAAATGTCTTGAATCTGACCTTAAAAAGCGTCCATCTATGAAACATGTTTTGGAGACATTGGAAGGCATAGAAGCTATCAAGGATAACATGAAGATATCTGTAGAAAAAGGTGATCATAATGGTTCACTAAAGAAAACAAAACAGAGAATTTCTGAATGA

Protein:

Promoter(3k):

>AM04G008580.1
ATTTTTCACGTTCTCGCGATTTTGATTTGATTTCGTTTCTCCGCATCGCGAACGGGTGGCATCTCCGCTACCGATCCCCCTCCCGTCGCCGTCGCCAGTGCATTGTCGTCACCACCCCTCCACTCCTCTTCCTCGTTCGTTCCTTCTGACCTTGCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATACTCGTTTCCGCGCGCCATTCTCCATCAACGCCAAAGCTTCGATCTGGAGGCTCAGGCAGCGGCGCAAGCCAGGGAGATGCGGATCGCGCTTTCATCACAGAACCAATTCCCGCAAGGATAATTTTCTTCTTTAGTTTCTTCCCTGTAATCGAATTTGTGTGGTGCTTCTTTCCTGCTCGCGATTTGGCTGGTTTTGGTGCACTCTAACCATTGTTATGCAAAACTGTGGTTAGTGGCATCTAACCACACTTATGCATATCTGTGGTTAGTTGCATCTAACCACAATTATGCATATCTGTGGTTAGTGACATCTAACCATTGCTATGCACATGTGTGGTTAGTGACATCTAACCATTGTGGTACAAATCTATGGTTAATGAACGAAGTTTGAATGCCCAGAAAACATCGCGTTTTAGTCATTTTTAGGTAAATGACCTATTTACCCTTTTTAGTAACTAATACTAAAATATAAGTTTAGTATTGCAAATCAGACTCGTGCATTCCGAAACTCTGTGGCACTTATTCATTGACTGTGACAAAGTAAGACAACTTTGGCAGCATCTCAACTTTTTCAACAAATTGGAATCTCATATCTTGTTGGTTGATGGACTTCAAGACTTGGTGTTGCTCATTCTAAGAAATTTTAATGAAGAGGATTCAATTAAGTGGTGCATGCATGCTTGGAGTTTGTGGTTTAGTAGGAATGCTCTTGTTCGGGAGAGTAAGCAGGAGCCAATTTCCTTGCTGTCAGCTAGAGTCATATCACATTTAACTCAGTGGCAAAGAGCTCATAAATGTGTTGTTCACTCAAATTCATCACAACATGCGATCCCCATTGGTTGTAACAAACCATCTACAGGATATTTCAAGTGCAACATTGATGCCTCATGTTGTCCTAATAAAAATAATGTGGGGATTGGAATGTGGTTAAGGAATGACCAAGGCCATTTTATAAAAGTTCAACTCTGAATATTCCTCAAAAGCTGCAGCCTCATGAAGGAGAGGTCCTGGGTCTTCTCAAAGCTATGCAATGGGTGGCTCACTTGGGGCTGGATAATATTATTTTTGAGTTAGATGCAAAATTGATATTAGGCCGTTATGTATTTCAACATTATTCAGTAACTTTGATTTGGCAAAAAAAAGGTAGTCTCATTTGCGCCAACTTTTTTTTTTCCATTTTTTTGTTTTTCTTTTGCTTTATTTTTTTTGTCAATTTTTGTTAGTTAATTAAAATATTCGTGCCTTTAGCCTATCTTTTTTTCTCACTTGGACCATCGGTTTTAGCCTATCTTTTTTTAACTATTTTCATCATTTAAGCTACATAGTTCTTAGATAAAAAATTCATTTGTTGGAATTTTTAAAGTTACGATTTATTTATTTTTTGTGGCTTTGTGTAGCGTTTAAAACAAAGTGCATTTGACATAGATATTACTATTATCTTATAGGCTAAATAGCACTTTTGGTCCTTTATGTTTGCTCTAGGTTTTACTTTGGTCCTTTCTATTTTTTTTTTGTCCGTTTTGGTCCCTCATGTTTCATTTTTGTTTCATTTTGGTCCCTACCGTTAGTTTTTTCTAACGGACGCCACGCTGGCAGTTAACTGCTGACGTGGCGTCCTCAATTCATTAAATGACGTGGCATTCATTATTGAGGTGGCAAAAAAAATTATTATTTAATTCAATATTATTTTACAATAATCAAAATAGAATTAAACAACGCCGAGAGGTTTTCCCTCCTTATCTGACAATCGCCAATATTTACATCTTTCTAGTGCCTATAGTTAGTAAGAATTAAACATTTCAATACTAAAGACAAGAATAGACCGCCTGGGAATCCCTGCAACCTGTAAATTTGAACAAATACTGTGAAAATAAGGTATTAGAGGTAGTGCTTACAGAGTGAAGAATCCATTTGTTGTAACATCAAATGCACTAGCCGCACCATACGTGGCACTGATCCAGTCAATTATCCTCTGCCTATGAGCATCTTGATTATAATCCATTTCACCATAACTCACAAAGGCACATGATAGAAACACAACCAATCATTTTCCTTCTTGGCTGCACTTAGAATCTCTTTGGCATACACATGATGATAATCCTCCTCACAATAACTCACAACGGCACATGATAGAAACACAACAAGCACGTGAATGGCTGCCATCAAAACAAATGGCCACTCTTGTCTCTCTCTCAACACTCCCAATCCTTTCTTTTTAATTTGTCCCTTCTAACTTCCAACTTCCAGGCCACTCGTTGACCCACGCTCATACATGATACAATAAAGAGGTCCATCAGCTCACAGCTCAAAGGTGAAATCTGCAAAATTGGGGCACGATCTTCTACCAGAACTTTGAGAACCCATTTATCTTTTCAGAGGTTCTAACTGGACTTCCATTCTTATAGATGGATGCAACTCTTTATTTGCAGGTGTTGTAGTTGTGCTCAGGAGATTAACTGAATCATCTTCCTCCAAATTACCAAGCACCCAATTGCTTCTTCCAGATGTCTGGTCCCTTTTTCGTTGTTTTCCGTGGAACTCTAAATAAAAAACAATCAATACACCAACTAAGATCCAAATTGCCAAAGCCCAATTGAGTCTGTGGACATTTTCCACATCATATTTATCTCCTAGATGCTTCATTCCACTAAAAAGCGCTGCAATGCCAACAACAATGGCACATCTACCAACAATTATGTGAAAATATTCCCAAATAACCCTAAGAACCAGAAGTGAAGGAGGAACCCTAAGAAGATGGCTCTGCGAAGC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07714.20	PK_Tyr_Ser-Thr	64	343	7.40E-48
PF00069.28	Pkinase	62	341	1.20E-46

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.2.2:RLK-Pelle_RLCK-VIIa-2

Gene Ontology

GO term	Description	Category
GO:0004674	protein serine/threonine kinase activity	Molecular Function
GO:0005886	plasma membrane	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0046872	metal ion binding	Molecular Function

InterPro

InterPro term	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
A0A1S2YZ88	_

SwissProt

SwissProt term	Description
PIX13_ARATH	Probable serine/threonine-protein kinase PIX13

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G17220	Protein kinase superfamily protein
Medicago sativa L.	MsG0580025191.01.T01	_
Oryza sativa L.	LOC_Os06g51170.1	serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed
Cucumis sativus L.	Csa026569	_
Glycyrrhiza uralensis Fisch.	Glyur000037s00002662.1	_
Codonopsis lanceolata	Cl_chr01_35940T	_
Arachis hypogaea L.	AH20G00870.1	Uncharacterized protein like

Expression pattern